EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005042 (Gene tree)
Gene ID: 100181882
Gene Symbol: -
Alias: -
Full Name: transportin-3-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 13229 bases
Position: chr2:7576427-7589655
Accession: 100181882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010393	Xpo1	PF08389.12	2e-22	1	1
ENSCINP00000010393	IBN_N	PF03810.19	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010393	-	3070	XM_002119827	ENSCINP00000010393	922 (aa)	XP_002119863	F6SM85

Gene Model

Click here to download ENSCING00000005042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005042	-	99	48.911	ENSG00000064419	TNPO3	99	48.911	Homo_sapiens
ENSCING00000005042	-	99	48.911	ENSAPOG00000018347	tnpo3	99	48.911	Acanthochromis_polyacanthus
ENSCING00000005042	-	98	47.518	ENSAMEG00000005135	TNPO3	97	47.518	Ailuropoda_melanoleuca
ENSCING00000005042	-	96	47.410	ENSACIG00000005897	tnpo3	99	47.410	Amphilophus_citrinellus
ENSCING00000005042	-	99	48.911	ENSAOCG00000008264	tnpo3	99	48.911	Amphiprion_ocellaris
ENSCING00000005042	-	96	48.198	ENSAPEG00000024300	tnpo3	100	48.198	Amphiprion_percula
ENSCING00000005042	-	99	48.911	ENSATEG00000003197	tnpo3	99	48.911	Anabas_testudineus
ENSCING00000005042	-	66	49.103	ENSAPLG00000005946	TNPO3	83	49.103	Anas_platyrhynchos
ENSCING00000005042	-	82	49.739	ENSACAG00000013470	TNPO3	95	49.739	Anolis_carolinensis
ENSCING00000005042	-	99	48.802	ENSANAG00000037940	TNPO3	99	48.802	Aotus_nancymaae
ENSCING00000005042	-	99	49.237	ENSACLG00000005561	tnpo3	99	49.237	Astatotilapia_calliptera
ENSCING00000005042	-	99	48.693	ENSAMXG00000016236	tnpo3	99	48.693	Astyanax_mexicanus
ENSCING00000005042	-	99	48.802	ENSBTAG00000004992	TNPO3	99	48.802	Bos_taurus
ENSCING00000005042	-	99	48.911	ENSCJAG00000018085	TNPO3	99	48.911	Callithrix_jacchus
ENSCING00000005042	-	99	48.911	ENSCAFG00000001543	TNPO3	99	48.911	Canis_familiaris
ENSCING00000005042	-	99	49.020	ENSCAFG00020022462	TNPO3	98	48.698	Canis_lupus_dingo
ENSCING00000005042	-	99	48.802	ENSCHIG00000011721	TNPO3	99	48.802	Capra_hircus
ENSCING00000005042	-	99	48.911	ENSTSYG00000002989	TNPO3	99	48.911	Carlito_syrichta
ENSCING00000005042	-	66	56.881	ENSCAPG00000005843	TNPO3	91	57.407	Cavia_aperea
ENSCING00000005042	-	99	48.911	ENSCPOG00000039784	TNPO3	99	48.911	Cavia_porcellus
ENSCING00000005042	-	99	48.911	ENSCCAG00000033826	TNPO3	99	48.911	Cebus_capucinus
ENSCING00000005042	-	99	48.911	ENSCATG00000030018	TNPO3	99	48.911	Cercocebus_atys
ENSCING00000005042	-	99	48.265	ENSCLAG00000016298	TNPO3	99	48.265	Chinchilla_lanigera
ENSCING00000005042	-	99	48.911	ENSCSAG00000009966	TNPO3	99	48.911	Chlorocebus_sabaeus
ENSCING00000005042	-	98	34.989	ENSCHOG00000011547	TNPO3	98	34.989	Choloepus_hoffmanni
ENSCING00000005042	-	93	47.680	ENSCPBG00000017497	TNPO3	100	47.680	Chrysemys_picta_bellii
ENSCING00000005042	-	99	84.848	ENSCSAVG00000008623	-	100	85.616	Ciona_savignyi
ENSCING00000005042	-	99	48.911	ENSCANG00000033070	TNPO3	99	48.911	Colobus_angolensis_palliatus
ENSCING00000005042	-	99	48.911	ENSCGRG00001015925	Tnpo3	99	48.911	Cricetulus_griseus_chok1gshd
ENSCING00000005042	-	99	48.911	ENSCGRG00000010379	Tnpo3	99	48.911	Cricetulus_griseus_crigri
ENSCING00000005042	-	99	48.693	ENSCSEG00000005952	tnpo3	96	54.265	Cynoglossus_semilaevis
ENSCING00000005042	-	99	49.346	ENSCVAG00000020285	tnpo3	99	49.346	Cyprinodon_variegatus
ENSCING00000005042	-	99	49.346	ENSDARG00000045680	tnpo3	99	49.346	Danio_rerio
ENSCING00000005042	-	99	48.911	ENSDNOG00000002556	TNPO3	99	48.911	Dasypus_novemcinctus
ENSCING00000005042	-	60	53.142	ENSDORG00000002433	Tnpo3	91	53.142	Dipodomys_ordii
ENSCING00000005042	-	99	38.817	FBgn0031456	Tnpo-SR	99	38.817	Drosophila_melanogaster
ENSCING00000005042	-	93	56.532	ENSETEG00000002101	TNPO3	88	56.532	Echinops_telfairi
ENSCING00000005042	-	99	49.564	ENSEBUG00000016931	tnpo3	99	49.564	Eptatretus_burgeri
ENSCING00000005042	-	99	48.911	ENSEASG00005008677	TNPO3	99	48.911	Equus_asinus_asinus
ENSCING00000005042	-	99	48.911	ENSECAG00000012815	TNPO3	99	48.911	Equus_caballus
ENSCING00000005042	-	63	31.373	ENSEEUG00000011681	IPO13	74	31.373	Erinaceus_europaeus
ENSCING00000005042	-	98	46.203	ENSEEUG00000005178	TNPO3	97	46.203	Erinaceus_europaeus
ENSCING00000005042	-	99	49.129	ENSELUG00000012153	tnpo3	99	49.129	Esox_lucius
ENSCING00000005042	-	99	48.911	ENSFCAG00000018186	TNPO3	99	48.911	Felis_catus
ENSCING00000005042	-	96	46.948	ENSFALG00000010667	TNPO3	100	46.948	Ficedula_albicollis
ENSCING00000005042	-	99	48.913	ENSFDAG00000019578	TNPO3	99	48.913	Fukomys_damarensis
ENSCING00000005042	-	99	48.867	ENSFHEG00000012859	tnpo3	100	48.867	Fundulus_heteroclitus
ENSCING00000005042	-	99	49.782	ENSGMOG00000007324	tnpo3	99	49.782	Gadus_morhua
ENSCING00000005042	-	60	52.603	ENSGALG00000039420	TNPO3	97	52.603	Gallus_gallus
ENSCING00000005042	-	99	48.482	ENSGACG00000000699	tnpo3	99	48.482	Gasterosteus_aculeatus
ENSCING00000005042	-	93	47.796	ENSGAGG00000006777	TNPO3	100	47.796	Gopherus_agassizii
ENSCING00000005042	-	99	48.911	ENSGGOG00000008339	TNPO3	99	48.911	Gorilla_gorilla
ENSCING00000005042	-	99	49.237	ENSHBUG00000008351	tnpo3	99	49.237	Haplochromis_burtoni
ENSCING00000005042	-	99	48.911	ENSHGLG00000004463	TNPO3	99	48.911	Heterocephalus_glaber_female
ENSCING00000005042	-	99	48.911	ENSHGLG00100005509	TNPO3	99	48.911	Heterocephalus_glaber_male
ENSCING00000005042	-	99	48.475	ENSHCOG00000007221	tnpo3	99	48.475	Hippocampus_comes
ENSCING00000005042	-	99	48.802	ENSIPUG00000014979	TNPO3	99	48.802	Ictalurus_punctatus
ENSCING00000005042	-	99	48.911	ENSSTOG00000004885	TNPO3	99	48.911	Ictidomys_tridecemlineatus
ENSCING00000005042	-	99	45.534	ENSJJAG00000013530	Tnpo3	99	45.297	Jaculus_jaculus
ENSCING00000005042	-	99	48.802	ENSKMAG00000010497	tnpo3	99	48.802	Kryptolebias_marmoratus
ENSCING00000005042	-	96	46.734	ENSLBEG00000016595	tnpo3	100	46.734	Labrus_bergylta
ENSCING00000005042	-	96	45.763	ENSLBEG00000011988	-	99	45.763	Labrus_bergylta
ENSCING00000005042	-	83	59.341	ENSLACG00000002351	TNPO3	99	59.341	Latimeria_chalumnae
ENSCING00000005042	-	99	49.129	ENSLOCG00000015556	tnpo3	99	49.129	Lepisosteus_oculatus
ENSCING00000005042	-	99	48.698	ENSLAFG00000002738	TNPO3	99	48.698	Loxodonta_africana
ENSCING00000005042	-	99	48.911	ENSMFAG00000032385	TNPO3	99	48.911	Macaca_fascicularis
ENSCING00000005042	-	99	48.911	ENSMMUG00000004311	TNPO3	99	48.911	Macaca_mulatta
ENSCING00000005042	-	99	48.911	ENSMNEG00000045277	TNPO3	99	48.911	Macaca_nemestrina
ENSCING00000005042	-	99	48.911	ENSMLEG00000037881	TNPO3	99	48.911	Mandrillus_leucophaeus
ENSCING00000005042	-	99	49.237	ENSMAMG00000021096	tnpo3	99	49.237	Mastacembelus_armatus
ENSCING00000005042	-	99	49.237	ENSMZEG00005015084	tnpo3	99	49.237	Maylandia_zebra
ENSCING00000005042	-	79	49.383	ENSMGAG00000002839	TNPO3	99	49.383	Meleagris_gallopavo
ENSCING00000005042	-	99	48.911	ENSMAUG00000013463	Tnpo3	99	48.911	Mesocricetus_auratus
ENSCING00000005042	-	99	48.911	ENSMICG00000000140	TNPO3	99	48.911	Microcebus_murinus
ENSCING00000005042	-	84	40.000	ENSMICG00000011003	IPO13	88	40.000	Microcebus_murinus
ENSCING00000005042	-	99	48.911	ENSMOCG00000013264	Tnpo3	99	48.911	Microtus_ochrogaster
ENSCING00000005042	-	99	48.475	ENSMMOG00000005887	tnpo3	99	48.475	Mola_mola
ENSCING00000005042	-	99	49.129	ENSMODG00000014700	TNPO3	99	49.129	Monodelphis_domestica
ENSCING00000005042	-	99	48.039	ENSMALG00000006675	tnpo3	99	48.039	Monopterus_albus
ENSCING00000005042	-	99	48.911	MGP_CAROLIEiJ_G0028176	Tnpo3	99	48.911	Mus_caroli
ENSCING00000005042	-	99	48.911	ENSMUSG00000012535	Tnpo3	99	48.911	Mus_musculus
ENSCING00000005042	-	99	48.911	MGP_PahariEiJ_G0021934	Tnpo3	99	48.911	Mus_pahari
ENSCING00000005042	-	99	48.911	MGP_SPRETEiJ_G0029176	Tnpo3	99	48.911	Mus_spretus
ENSCING00000005042	-	99	48.911	ENSMPUG00000006021	TNPO3	99	48.911	Mustela_putorius_furo
ENSCING00000005042	-	99	44.000	ENSMLUG00000000947	TNPO3	99	44.000	Myotis_lucifugus
ENSCING00000005042	-	99	48.911	ENSNGAG00000008722	Tnpo3	99	48.911	Nannospalax_galili
ENSCING00000005042	-	99	48.799	ENSNBRG00000019001	tnpo3	99	49.602	Neolamprologus_brichardi
ENSCING00000005042	-	99	47.584	ENSNLEG00000012491	TNPO3	99	47.584	Nomascus_leucogenys
ENSCING00000005042	-	88	57.025	ENSMEUG00000002445	TNPO3	84	57.025	Notamacropus_eugenii
ENSCING00000005042	-	89	59.195	ENSOPRG00000006163	TNPO3	89	59.195	Ochotona_princeps
ENSCING00000005042	-	97	48.775	ENSODEG00000012826	TNPO3	99	48.775	Octodon_degus
ENSCING00000005042	-	99	49.129	ENSONIG00000007604	tnpo3	99	49.129	Oreochromis_niloticus
ENSCING00000005042	-	95	46.544	ENSOANG00000011451	TNPO3	100	46.760	Ornithorhynchus_anatinus
ENSCING00000005042	-	98	47.407	ENSOCUG00000010105	TNPO3	97	47.407	Oryctolagus_cuniculus
ENSCING00000005042	-	99	48.475	ENSORLG00000029369	tnpo3	99	48.475	Oryzias_latipes
ENSCING00000005042	-	99	48.475	ENSORLG00020003464	tnpo3	99	48.475	Oryzias_latipes_hni
ENSCING00000005042	-	99	48.475	ENSORLG00015002610	tnpo3	99	48.475	Oryzias_latipes_hsok
ENSCING00000005042	-	99	48.802	ENSOMEG00000021006	tnpo3	99	48.802	Oryzias_melastigma
ENSCING00000005042	-	99	49.020	ENSOGAG00000015340	TNPO3	99	49.020	Otolemur_garnettii
ENSCING00000005042	-	99	48.911	ENSOARG00000004026	TNPO3	99	48.911	Ovis_aries
ENSCING00000005042	-	99	48.911	ENSPPAG00000034975	TNPO3	99	48.911	Pan_paniscus
ENSCING00000005042	-	99	48.911	ENSPPRG00000002050	TNPO3	99	48.911	Panthera_pardus
ENSCING00000005042	-	99	48.911	ENSPTIG00000016167	TNPO3	99	48.911	Panthera_tigris_altaica
ENSCING00000005042	-	99	48.911	ENSPTRG00000019676	TNPO3	99	48.911	Pan_troglodytes
ENSCING00000005042	-	99	47.584	ENSPANG00000022226	TNPO3	98	48.775	Papio_anubis
ENSCING00000005042	-	99	48.584	ENSPKIG00000023234	tnpo3	99	48.584	Paramormyrops_kingsleyae
ENSCING00000005042	-	99	47.014	ENSPKIG00000008628	-	99	47.014	Paramormyrops_kingsleyae
ENSCING00000005042	-	60	49.372	ENSPMGG00000009763	tnpo3	97	49.372	Periophthalmus_magnuspinnatus
ENSCING00000005042	-	99	48.911	ENSPEMG00000000422	Tnpo3	99	48.911	Peromyscus_maniculatus_bairdii
ENSCING00000005042	-	95	49.437	ENSPMAG00000008621	tnpo3	100	49.437	Petromyzon_marinus
ENSCING00000005042	-	99	49.020	ENSPCIG00000011366	TNPO3	99	49.020	Phascolarctos_cinereus
ENSCING00000005042	-	99	48.693	ENSPFOG00000013592	tnpo3	99	48.693	Poecilia_formosa
ENSCING00000005042	-	99	48.693	ENSPLAG00000010188	tnpo3	99	48.693	Poecilia_latipinna
ENSCING00000005042	-	99	48.693	ENSPMEG00000022731	tnpo3	99	48.693	Poecilia_mexicana
ENSCING00000005042	-	99	48.911	ENSPPYG00000017990	TNPO3	99	48.911	Pongo_abelii
ENSCING00000005042	-	98	44.093	ENSPCAG00000010158	TNPO3	97	44.093	Procavia_capensis
ENSCING00000005042	-	99	38.553	ENSPCOG00000023901	TNPO3	95	43.738	Propithecus_coquereli
ENSCING00000005042	-	98	46.040	ENSPVAG00000015757	TNPO3	97	46.040	Pteropus_vampyrus
ENSCING00000005042	-	99	49.237	ENSPNYG00000002349	tnpo3	99	49.237	Pundamilia_nyererei
ENSCING00000005042	-	99	49.346	ENSPNAG00000001142	tnpo3	99	49.241	Pygocentrus_nattereri
ENSCING00000005042	-	99	48.911	ENSRNOG00000021758	Tnpo3	99	48.911	Rattus_norvegicus
ENSCING00000005042	-	99	48.911	ENSRBIG00000042549	TNPO3	99	48.911	Rhinopithecus_bieti
ENSCING00000005042	-	99	48.911	ENSRROG00000039264	TNPO3	99	48.911	Rhinopithecus_roxellana
ENSCING00000005042	-	87	46.114	ENSSBOG00000029642	TNPO3	99	46.429	Saimiri_boliviensis_boliviensis
ENSCING00000005042	-	96	48.536	ENSSHAG00000006837	TNPO3	100	48.536	Sarcophilus_harrisii
ENSCING00000005042	-	99	49.020	ENSSFOG00015001474	tnpo3	99	49.020	Scleropages_formosus
ENSCING00000005042	-	99	48.013	ENSSFOG00015004256	tnpo3	99	48.013	Scleropages_formosus
ENSCING00000005042	-	99	48.807	ENSSMAG00000010422	tnpo3	96	48.807	Scophthalmus_maximus
ENSCING00000005042	-	99	48.911	ENSSDUG00000004850	tnpo3	99	48.911	Seriola_dumerili
ENSCING00000005042	-	99	48.911	ENSSLDG00000016927	tnpo3	99	48.911	Seriola_lalandi_dorsalis
ENSCING00000005042	-	90	44.135	ENSSARG00000013893	TNPO3	93	44.135	Sorex_araneus
ENSCING00000005042	-	99	45.425	ENSSPUG00000007457	TNPO3	98	45.425	Sphenodon_punctatus
ENSCING00000005042	-	77	51.763	ENSSPAG00000014209	tnpo3	96	51.763	Stegastes_partitus
ENSCING00000005042	-	99	48.911	ENSSSCG00000016572	TNPO3	99	48.911	Sus_scrofa
ENSCING00000005042	-	99	48.317	ENSTNIG00000003347	tnpo3	99	48.317	Tetraodon_nigroviridis
ENSCING00000005042	-	86	47.801	ENSTBEG00000007220	TNPO3	89	47.801	Tupaia_belangeri
ENSCING00000005042	-	98	41.816	ENSTTRG00000014618	TNPO3	97	41.816	Tursiops_truncatus
ENSCING00000005042	-	99	48.911	ENSUAMG00000021281	TNPO3	99	48.911	Ursus_americanus
ENSCING00000005042	-	99	48.911	ENSUMAG00000006882	TNPO3	99	48.911	Ursus_maritimus
ENSCING00000005042	-	85	42.629	ENSVPAG00000006166	TNPO3	88	42.629	Vicugna_pacos
ENSCING00000005042	-	99	49.020	ENSVVUG00000011004	TNPO3	99	59.459	Vulpes_vulpes
ENSCING00000005042	-	99	44.831	ENSXETG00000015009	tnpo3	99	44.831	Xenopus_tropicalis
ENSCING00000005042	-	99	48.584	ENSXMAG00000013062	tnpo3	99	48.584	Xiphophorus_maculatus