EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005161 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein FRG1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3016 bases
Position: chr2:5502904-5505919
Accession: 100179962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010617	FRG1	PF06229.12	1.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010617	-	1215	XM_009859381	ENSCINP00000010617	268 (aa)	XP_009857683	F6SKS5

Gene Model

Click here to download ENSCING00000005161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005161	-	99	52.612	ENSG00000109536	FRG1	100	59.483	Homo_sapiens
ENSCING00000005161	-	99	50.936	ENSAPOG00000001060	frg1	99	48.315	Acanthochromis_polyacanthus
ENSCING00000005161	-	99	52.612	ENSAMEG00000013503	FRG1	99	52.612	Ailuropoda_melanoleuca
ENSCING00000005161	-	82	51.142	ENSACIG00000022283	frg1	97	51.142	Amphilophus_citrinellus
ENSCING00000005161	-	82	52.036	ENSAOCG00000024240	frg1	85	52.036	Amphiprion_ocellaris
ENSCING00000005161	-	99	50.187	ENSAPEG00000002486	frg1	99	47.566	Amphiprion_percula
ENSCING00000005161	-	80	50.233	ENSATEG00000010414	frg1	99	46.642	Anabas_testudineus
ENSCING00000005161	-	99	51.685	ENSAPLG00000007785	-	99	50.562	Anas_platyrhynchos
ENSCING00000005161	-	99	51.685	ENSACAG00000006877	-	88	54.585	Anolis_carolinensis
ENSCING00000005161	-	99	53.731	ENSANAG00000020876	FRG1	99	52.239	Aotus_nancymaae
ENSCING00000005161	-	99	44.074	ENSACLG00000027065	frg1	88	50.233	Astatotilapia_calliptera
ENSCING00000005161	-	99	48.881	ENSAMXG00000032700	frg1	99	48.507	Astyanax_mexicanus
ENSCING00000005161	-	99	52.612	ENSBTAG00000007089	FRG1	99	52.612	Bos_taurus
ENSCING00000005161	-	82	37.238	WBGene00014177	frg-1	84	37.238	Caenorhabditis_elegans
ENSCING00000005161	-	99	53.731	ENSCJAG00000011272	FRG1	99	52.239	Callithrix_jacchus
ENSCING00000005161	-	99	52.612	ENSCAFG00000007135	FRG1	99	52.612	Canis_familiaris
ENSCING00000005161	-	79	57.944	ENSCAFG00020000082	-	90	55.895	Canis_lupus_dingo
ENSCING00000005161	-	99	52.612	ENSCHIG00000011585	-	99	52.612	Capra_hircus
ENSCING00000005161	-	77	43.062	ENSTSYG00000031599	-	81	42.105	Carlito_syrichta
ENSCING00000005161	-	82	56.364	ENSCAPG00000016056	-	89	56.364	Cavia_aperea
ENSCING00000005161	-	82	56.364	ENSCPOG00000022277	-	99	53.160	Cavia_porcellus
ENSCING00000005161	-	99	53.731	ENSCCAG00000024627	FRG1	99	52.239	Cebus_capucinus
ENSCING00000005161	-	99	52.985	ENSCATG00000029230	FRG1	99	52.985	Cercocebus_atys
ENSCING00000005161	-	99	37.079	ENSCLAG00000006068	-	80	41.315	Chinchilla_lanigera
ENSCING00000005161	-	99	43.284	ENSCLAG00000004960	-	88	45.106	Chinchilla_lanigera
ENSCING00000005161	-	81	40.826	ENSCLAG00000009263	-	87	40.789	Chinchilla_lanigera
ENSCING00000005161	-	82	56.364	ENSCLAG00000000370	-	99	52.612	Chinchilla_lanigera
ENSCING00000005161	-	80	55.093	ENSCSAG00000017729	-	99	55.093	Chlorocebus_sabaeus
ENSCING00000005161	-	99	52.985	ENSCSAG00000002899	FRG1	99	52.985	Chlorocebus_sabaeus
ENSCING00000005161	-	84	53.778	ENSCPBG00000009211	-	88	53.712	Chrysemys_picta_bellii
ENSCING00000005161	-	68	83.060	ENSCSAVG00000008018	-	100	83.060	Ciona_savignyi
ENSCING00000005161	-	99	52.985	ENSCANG00000020991	FRG1	99	52.985	Colobus_angolensis_palliatus
ENSCING00000005161	-	99	52.239	ENSCGRG00001014998	Frg1	99	52.239	Cricetulus_griseus_chok1gshd
ENSCING00000005161	-	99	44.403	ENSCGRG00000003902	-	95	42.910	Cricetulus_griseus_crigri
ENSCING00000005161	-	99	52.239	ENSCGRG00000011860	-	99	52.239	Cricetulus_griseus_crigri
ENSCING00000005161	-	96	45.136	ENSCSEG00000015950	frg1	100	45.525	Cynoglossus_semilaevis
ENSCING00000005161	-	99	47.191	ENSCVAG00000009985	frg1	99	47.191	Cyprinodon_variegatus
ENSCING00000005161	-	99	49.438	ENSDARG00000056504	frg1	99	49.064	Danio_rerio
ENSCING00000005161	-	99	52.612	ENSDNOG00000014886	FRG1	99	52.985	Dasypus_novemcinctus
ENSCING00000005161	-	82	50.909	ENSDORG00000016190	Frg1	99	47.761	Dipodomys_ordii
ENSCING00000005161	-	82	47.297	FBgn0036964	FRG1	83	47.297	Drosophila_melanogaster
ENSCING00000005161	-	99	51.493	ENSETEG00000012349	-	99	51.493	Echinops_telfairi
ENSCING00000005161	-	60	42.857	ENSEBUG00000012359	FRG1	97	42.857	Eptatretus_burgeri
ENSCING00000005161	-	56	38.000	ENSEBUG00000014053	frg1	80	38.312	Eptatretus_burgeri
ENSCING00000005161	-	99	53.731	ENSEASG00005017497	FRG1	99	52.239	Equus_asinus_asinus
ENSCING00000005161	-	99	53.731	ENSECAG00000003122	FRG1	99	52.239	Equus_caballus
ENSCING00000005161	-	60	55.000	ENSEEUG00000000145	-	100	55.000	Erinaceus_europaeus
ENSCING00000005161	-	99	52.060	ENSELUG00000021712	frg1	99	50.554	Esox_lucius
ENSCING00000005161	-	99	52.612	ENSFCAG00000025737	FRG1	99	52.612	Felis_catus
ENSCING00000005161	-	83	53.604	ENSFALG00000011231	-	88	52.632	Ficedula_albicollis
ENSCING00000005161	-	99	45.725	ENSFDAG00000012697	-	86	47.162	Fukomys_damarensis
ENSCING00000005161	-	99	53.358	ENSFDAG00000000962	-	99	52.239	Fukomys_damarensis
ENSCING00000005161	-	99	45.318	ENSFHEG00000010540	frg1	99	45.693	Fundulus_heteroclitus
ENSCING00000005161	-	80	54.419	ENSGMOG00000000867	frg1	99	49.813	Gadus_morhua
ENSCING00000005161	-	99	50.562	ENSGALG00000013590	-	99	50.373	Gallus_gallus
ENSCING00000005161	-	82	43.636	ENSGAFG00000013855	frg1	100	43.182	Gambusia_affinis
ENSCING00000005161	-	99	48.881	ENSGACG00000016888	frg1	83	53.488	Gasterosteus_aculeatus
ENSCING00000005161	-	99	49.813	ENSGAGG00000025012	-	99	50.746	Gopherus_agassizii
ENSCING00000005161	-	64	51.163	ENSGGOG00000012888	-	85	51.163	Gorilla_gorilla
ENSCING00000005161	-	99	46.442	ENSHBUG00000010667	frg1	99	46.442	Haplochromis_burtoni
ENSCING00000005161	-	99	45.149	ENSHGLG00000001211	-	99	44.776	Heterocephalus_glaber_female
ENSCING00000005161	-	99	51.493	ENSHGLG00000020943	-	99	50.000	Heterocephalus_glaber_female
ENSCING00000005161	-	99	53.731	ENSHGLG00000005601	FRG1	99	52.239	Heterocephalus_glaber_female
ENSCING00000005161	-	99	51.866	ENSHGLG00000020402	-	94	50.373	Heterocephalus_glaber_female
ENSCING00000005161	-	99	45.522	ENSHGLG00100010674	-	99	45.149	Heterocephalus_glaber_male
ENSCING00000005161	-	99	51.493	ENSHGLG00100021211	-	99	50.000	Heterocephalus_glaber_male
ENSCING00000005161	-	99	53.358	ENSHGLG00100016261	-	99	51.866	Heterocephalus_glaber_male
ENSCING00000005161	-	99	42.697	ENSHGLG00100015285	-	99	40.824	Heterocephalus_glaber_male
ENSCING00000005161	-	82	52.273	ENSHCOG00000000224	frg1	96	51.092	Hippocampus_comes
ENSCING00000005161	-	99	48.134	ENSIPUG00000022716	frg1	88	51.852	Ictalurus_punctatus
ENSCING00000005161	-	99	53.358	ENSSTOG00000002857	-	99	52.985	Ictidomys_tridecemlineatus
ENSCING00000005161	-	82	56.818	ENSJJAG00000020625	Frg1	99	52.612	Jaculus_jaculus
ENSCING00000005161	-	99	46.816	ENSKMAG00000005841	frg1	99	47.566	Kryptolebias_marmoratus
ENSCING00000005161	-	99	46.816	ENSLBEG00000001466	frg1	99	45.185	Labrus_bergylta
ENSCING00000005161	-	99	47.232	ENSLACG00000010243	frg1	99	47.601	Latimeria_chalumnae
ENSCING00000005161	-	99	49.813	ENSLOCG00000013868	frg1	99	49.438	Lepisosteus_oculatus
ENSCING00000005161	-	82	56.818	ENSLAFG00000011191	FRG1	99	52.612	Loxodonta_africana
ENSCING00000005161	-	79	51.852	ENSMFAG00000042873	-	88	51.852	Macaca_fascicularis
ENSCING00000005161	-	99	52.985	ENSMFAG00000031178	FRG1	99	52.985	Macaca_fascicularis
ENSCING00000005161	-	76	50.000	ENSMMUG00000047496	-	87	50.000	Macaca_mulatta
ENSCING00000005161	-	99	52.985	ENSMMUG00000001824	FRG1	99	52.985	Macaca_mulatta
ENSCING00000005161	-	96	47.674	ENSMNEG00000018620	FRG1	100	47.674	Macaca_nemestrina
ENSCING00000005161	-	99	52.985	ENSMLEG00000028881	FRG1	99	52.985	Mandrillus_leucophaeus
ENSCING00000005161	-	96	46.304	ENSMAMG00000012406	frg1	99	47.566	Mastacembelus_armatus
ENSCING00000005161	-	99	46.442	ENSMZEG00005007549	frg1	99	46.442	Maylandia_zebra
ENSCING00000005161	-	99	50.562	ENSMGAG00000011481	-	99	50.373	Meleagris_gallopavo
ENSCING00000005161	-	99	52.239	ENSMAUG00000000847	Frg1	99	52.239	Mesocricetus_auratus
ENSCING00000005161	-	99	52.612	ENSMICG00000046816	FRG1	99	52.612	Microcebus_murinus
ENSCING00000005161	-	99	48.689	ENSMOCG00000023000	Frg1	99	48.689	Microtus_ochrogaster
ENSCING00000005161	-	82	51.598	ENSMMOG00000004008	frg1	96	50.439	Mola_mola
ENSCING00000005161	-	82	55.909	ENSMODG00000019031	-	87	52.239	Monodelphis_domestica
ENSCING00000005161	-	99	48.315	ENSMALG00000018497	frg1	99	48.315	Monopterus_albus
ENSCING00000005161	-	99	52.239	MGP_CAROLIEiJ_G0031006	Frg1	99	52.239	Mus_caroli
ENSCING00000005161	-	99	52.239	ENSMUSG00000031590	Frg1	99	52.239	Mus_musculus
ENSCING00000005161	-	99	52.239	MGP_PahariEiJ_G0021475	Frg1	99	52.239	Mus_pahari
ENSCING00000005161	-	99	51.866	MGP_SPRETEiJ_G0032120	Frg1	99	51.866	Mus_spretus
ENSCING00000005161	-	99	52.612	ENSMPUG00000017962	FRG1	99	52.612	Mustela_putorius_furo
ENSCING00000005161	-	99	53.358	ENSMLUG00000023179	FRG1	99	51.866	Myotis_lucifugus
ENSCING00000005161	-	99	52.612	ENSNGAG00000016411	Frg1	99	52.612	Nannospalax_galili
ENSCING00000005161	-	82	41.704	ENSNBRG00000006806	frg1	78	48.810	Neolamprologus_brichardi
ENSCING00000005161	-	99	53.358	ENSNLEG00000000930	FRG1	99	51.866	Nomascus_leucogenys
ENSCING00000005161	-	83	42.152	ENSNLEG00000032846	-	99	53.509	Nomascus_leucogenys
ENSCING00000005161	-	76	51.471	ENSNLEG00000028874	-	91	51.471	Nomascus_leucogenys
ENSCING00000005161	-	99	46.324	ENSNLEG00000035849	-	84	48.780	Nomascus_leucogenys
ENSCING00000005161	-	76	51.961	ENSNLEG00000036059	-	86	51.961	Nomascus_leucogenys
ENSCING00000005161	-	96	42.424	ENSNLEG00000032333	-	89	44.934	Nomascus_leucogenys
ENSCING00000005161	-	57	53.896	ENSMEUG00000007509	-	58	53.896	Notamacropus_eugenii
ENSCING00000005161	-	99	42.537	ENSOPRG00000004722	-	88	44.541	Ochotona_princeps
ENSCING00000005161	-	82	56.364	ENSODEG00000006458	-	99	52.612	Octodon_degus
ENSCING00000005161	-	82	45.455	ENSODEG00000006953	-	95	45.455	Octodon_degus
ENSCING00000005161	-	99	46.269	ENSONIG00000010162	frg1	99	46.269	Oreochromis_niloticus
ENSCING00000005161	-	73	51.531	ENSOANG00000005659	-	86	51.531	Ornithorhynchus_anatinus
ENSCING00000005161	-	99	52.239	ENSOCUG00000009038	-	99	52.239	Oryctolagus_cuniculus
ENSCING00000005161	-	96	48.638	ENSORLG00000008106	frg1	89	47.471	Oryzias_latipes
ENSCING00000005161	-	99	49.438	ENSORLG00020014355	frg1	99	48.315	Oryzias_latipes_hni
ENSCING00000005161	-	99	49.064	ENSORLG00015014159	frg1	99	47.940	Oryzias_latipes_hsok
ENSCING00000005161	-	84	44.690	ENSOMEG00000002468	frg1	88	44.248	Oryzias_melastigma
ENSCING00000005161	-	99	52.239	ENSOGAG00000005749	-	99	52.985	Otolemur_garnettii
ENSCING00000005161	-	99	51.661	ENSOARG00000008592	FRG1	99	51.661	Ovis_aries
ENSCING00000005161	-	84	49.780	ENSPPAG00000043170	-	100	49.780	Pan_paniscus
ENSCING00000005161	-	96	40.149	ENSPPAG00000043174	-	77	43.902	Pan_paniscus
ENSCING00000005161	-	99	52.239	ENSPPRG00000025003	-	99	52.239	Panthera_pardus
ENSCING00000005161	-	99	52.612	ENSPPRG00000019777	-	99	51.119	Panthera_pardus
ENSCING00000005161	-	99	52.239	ENSPTIG00000006588	-	99	52.239	Panthera_tigris_altaica
ENSCING00000005161	-	99	52.612	ENSPTIG00000006566	-	99	51.119	Panthera_tigris_altaica
ENSCING00000005161	-	89	46.058	ENSPTRG00000043123	-	82	47.343	Pan_troglodytes
ENSCING00000005161	-	99	52.612	ENSPTRG00000016671	-	99	52.612	Pan_troglodytes
ENSCING00000005161	-	96	43.846	ENSPTRG00000044710	-	86	49.038	Pan_troglodytes
ENSCING00000005161	-	95	44.922	ENSPTRG00000052363	-	94	51.923	Pan_troglodytes
ENSCING00000005161	-	96	43.077	ENSPTRG00000050204	-	86	48.077	Pan_troglodytes
ENSCING00000005161	-	99	52.612	ENSPTRG00000050205	-	99	52.612	Pan_troglodytes
ENSCING00000005161	-	99	47.191	ENSPKIG00000024189	frg1	99	47.566	Paramormyrops_kingsleyae
ENSCING00000005161	-	80	54.419	ENSPSIG00000017971	-	81	54.419	Pelodiscus_sinensis
ENSCING00000005161	-	98	41.603	ENSPMGG00000019273	frg1	86	46.667	Periophthalmus_magnuspinnatus
ENSCING00000005161	-	99	52.239	ENSPEMG00000000650	Frg1	99	52.239	Peromyscus_maniculatus_bairdii
ENSCING00000005161	-	99	51.119	ENSPCIG00000007530	-	69	50.746	Phascolarctos_cinereus
ENSCING00000005161	-	99	46.816	ENSPFOG00000006721	frg1	99	46.468	Poecilia_formosa
ENSCING00000005161	-	99	47.191	ENSPMEG00000013816	frg1	99	46.816	Poecilia_mexicana
ENSCING00000005161	-	99	46.816	ENSPREG00000000097	frg1	99	46.442	Poecilia_reticulata
ENSCING00000005161	-	55	55.405	ENSPPYG00000029810	-	100	55.405	Pongo_abelii
ENSCING00000005161	-	60	52.174	ENSPPYG00000011275	-	87	52.174	Pongo_abelii
ENSCING00000005161	-	96	49.416	ENSPCAG00000014953	-	100	49.416	Procavia_capensis
ENSCING00000005161	-	56	48.684	ENSPCOG00000022726	FRG1	81	48.684	Propithecus_coquereli
ENSCING00000005161	-	99	44.776	ENSPVAG00000010551	FRG1	99	44.403	Pteropus_vampyrus
ENSCING00000005161	-	64	50.581	ENSPNYG00000015209	frg1	73	50.581	Pundamilia_nyererei
ENSCING00000005161	-	99	46.816	ENSPNAG00000013259	frg1	88	53.023	Pygocentrus_nattereri
ENSCING00000005161	-	99	50.746	ENSRNOG00000009846	Frg1	99	51.866	Rattus_norvegicus
ENSCING00000005161	-	89	51.250	ENSRBIG00000042219	-	96	51.250	Rhinopithecus_bieti
ENSCING00000005161	-	99	51.493	ENSRROG00000015523	FRG1	99	51.493	Rhinopithecus_roxellana
ENSCING00000005161	-	79	54.930	ENSRROG00000032084	-	94	51.402	Rhinopithecus_roxellana
ENSCING00000005161	-	99	53.358	ENSSBOG00000034175	FRG1	99	51.866	Saimiri_boliviensis_boliviensis
ENSCING00000005161	-	99	51.493	ENSSHAG00000005886	-	99	51.493	Sarcophilus_harrisii
ENSCING00000005161	-	97	46.538	ENSSFOG00015021361	frg1	99	46.538	Scleropages_formosus
ENSCING00000005161	-	80	51.869	ENSSMAG00000001213	frg1	99	47.566	Scophthalmus_maximus
ENSCING00000005161	-	99	47.191	ENSSDUG00000018886	frg1	83	51.628	Seriola_dumerili
ENSCING00000005161	-	80	51.628	ENSSLDG00000024191	frg1	83	51.628	Seriola_lalandi_dorsalis
ENSCING00000005161	-	64	54.651	ENSSARG00000002471	-	95	52.486	Sorex_araneus
ENSCING00000005161	-	99	48.315	ENSSPUG00000017326	-	96	47.964	Sphenodon_punctatus
ENSCING00000005161	-	80	51.628	ENSSPAG00000013294	frg1	85	51.628	Stegastes_partitus
ENSCING00000005161	-	82	56.364	ENSSSCG00000006996	FRG1	99	52.239	Sus_scrofa
ENSCING00000005161	-	99	50.936	ENSTGUG00000007028	-	99	50.187	Taeniopygia_guttata
ENSCING00000005161	-	99	46.442	ENSTRUG00000016208	frg1	99	46.816	Takifugu_rubripes
ENSCING00000005161	-	99	47.940	ENSTNIG00000007128	frg1	99	48.327	Tetraodon_nigroviridis
ENSCING00000005161	-	79	38.498	ENSTBEG00000012789	-	99	38.498	Tupaia_belangeri
ENSCING00000005161	-	99	51.866	ENSTBEG00000014491	-	99	51.866	Tupaia_belangeri
ENSCING00000005161	-	75	37.313	ENSTBEG00000017605	-	99	37.313	Tupaia_belangeri
ENSCING00000005161	-	99	52.985	ENSTTRG00000003429	FRG1	99	52.985	Tursiops_truncatus
ENSCING00000005161	-	96	50.388	ENSUAMG00000012123	-	85	56.796	Ursus_americanus
ENSCING00000005161	-	99	52.612	ENSUMAG00000021119	FRG1	99	52.612	Ursus_maritimus
ENSCING00000005161	-	99	50.373	ENSVPAG00000000616	FRG1	99	51.301	Vicugna_pacos
ENSCING00000005161	-	82	56.364	ENSVPAG00000011977	-	92	56.364	Vicugna_pacos
ENSCING00000005161	-	79	57.944	ENSVVUG00000007181	-	77	57.944	Vulpes_vulpes
ENSCING00000005161	-	99	49.064	ENSXETG00000012470	frg1	99	49.627	Xenopus_tropicalis
ENSCING00000005161	-	99	45.318	ENSXCOG00000005312	frg1	84	51.628	Xiphophorus_couchianus
ENSCING00000005161	-	99	47.566	ENSXMAG00000007751	frg1	99	47.191	Xiphophorus_maculatus