EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000005175 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
3860 bases
Position
chr1:4690197-4694056
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000010722ResIIIPF04851.157.2e-0711
ENSCINP00000010722DEADPF00270.297.8e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000010722-1643-ENSCINP00000010722427 (aa)-F6Z194
Gene Model
Click here to download ENSCING00000005175's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005175's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000005175-9886.091ENSG00000123136DDX39A9188.689Homo_sapiens
ENSCING00000005175-9885.372ENSAPOG00000013540ddx39aa9188.432Acanthochromis_polyacanthus
ENSCING00000005175-9381.566ENSAPOG00000009309-9181.795Acanthochromis_polyacanthus
ENSCING00000005175-9289.086ENSAMEG00000013379DDX39A8988.946Ailuropoda_melanoleuca
ENSCING00000005175-9885.646ENSACIG00000007948-9188.689Amphilophus_citrinellus
ENSCING00000005175-9389.367ENSACIG00000020898DDX39A9189.717Amphilophus_citrinellus
ENSCING00000005175-9288.325ENSAOCG00000011728DDX39A9188.432Amphiprion_ocellaris
ENSCING00000005175-9389.620ENSAOCG00000007403-9189.974Amphiprion_ocellaris
ENSCING00000005175-9288.325ENSAPEG00000001421DDX39A9188.432Amphiprion_percula
ENSCING00000005175-9389.620ENSAPEG00000017193-9189.974Amphiprion_percula
ENSCING00000005175-9389.620ENSATEG00000012052DDX39A8789.974Anabas_testudineus
ENSCING00000005175-9885.612ENSATEG00000004275ddx39aa9188.689Anabas_testudineus
ENSCING00000005175-9388.861ENSACAG00000010756DDX39A9188.689Anolis_carolinensis
ENSCING00000005175-9287.817ENSANAG00000036829-9187.918Aotus_nancymaae
ENSCING00000005175-9763.221ENSANAG00000025403-8967.209Aotus_nancymaae
ENSCING00000005175-9288.071ENSACLG00000004945-9188.175Astatotilapia_calliptera
ENSCING00000005175-9390.127ENSACLG00000001214DDX39A9190.488Astatotilapia_calliptera
ENSCING00000005175-9389.367ENSAMXG00000015256-9189.717Astyanax_mexicanus
ENSCING00000005175-9389.620ENSAMXG00000018631DDX39A9189.974Astyanax_mexicanus
ENSCING00000005175-9288.325ENSBTAG00000021820DDX39A9188.175Bos_taurus
ENSCING00000005175-9977.541WBGene00001840hel-19280.563Caenorhabditis_elegans
ENSCING00000005175-9284.264ENSCJAG00000004760DDX39A9184.319Callithrix_jacchus
ENSCING00000005175-9289.086ENSCAFG00000016355DDX39A9188.946Canis_familiaris
ENSCING00000005175-9289.086ENSCAFG00020007399DDX39A9188.946Canis_lupus_dingo
ENSCING00000005175-9288.579ENSCHIG00000019059DDX39A9188.432Capra_hircus
ENSCING00000005175-9289.086ENSTSYG00000030248DDX39A9188.946Carlito_syrichta
ENSCING00000005175-9288.832ENSCAPG00000010901DDX39A9188.689Cavia_aperea
ENSCING00000005175-9288.832ENSCPOG00000008615DDX39A9188.689Cavia_porcellus
ENSCING00000005175-9288.832ENSCCAG00000034932DDX39A9188.946Cebus_capucinus
ENSCING00000005175-9886.091ENSCATG00000044440DDX39A9188.689Cercocebus_atys
ENSCING00000005175-9289.340ENSCLAG00000015069DDX39A9189.203Chinchilla_lanigera
ENSCING00000005175-9886.091ENSCSAG00000006342DDX39A9188.689Chlorocebus_sabaeus
ENSCING00000005175-9384.596ENSCPBG00000011879DDX39A9184.359Chrysemys_picta_bellii
ENSCING00000005175-9998.109ENSCSAVG00000002162-9998.109Ciona_savignyi
ENSCING00000005175-9886.091ENSCANG00000037031-9188.689Colobus_angolensis_palliatus
ENSCING00000005175-9883.213ENSCANG00000034172-9185.604Colobus_angolensis_palliatus
ENSCING00000005175-9886.331ENSCGRG00001001611Ddx399188.689Cricetulus_griseus_chok1gshd
ENSCING00000005175-9886.331ENSCGRG00000014915Ddx399188.689Cricetulus_griseus_crigri
ENSCING00000005175-9984.597ENSCSEG00000003434ddx39aa9288.432Cynoglossus_semilaevis
ENSCING00000005175-9388.861ENSCSEG00000015474DDX39A9089.203Cynoglossus_semilaevis
ENSCING00000005175-9389.367ENSCVAG00000007477DDX39A9189.717Cyprinodon_variegatus
ENSCING00000005175-9389.114ENSDARG00000015111ddx39ab9189.460Danio_rerio
ENSCING00000005175-9388.354ENSDARG00000006225ddx39aa9188.689Danio_rerio
ENSCING00000005175-8670.430ENSDNOG00000049340DDX39A8370.027Dasypus_novemcinctus
ENSCING00000005175-9288.071ENSDORG00000013041Ddx399187.918Dipodomys_ordii
ENSCING00000005175-9982.824FBgn0014189Hel25E9286.480Drosophila_melanogaster
ENSCING00000005175-9175.000ENSETEG00000016559DDX39A9174.677Echinops_telfairi
ENSCING00000005175-9390.380ENSEBUG00000010042ddx39aa8990.746Eptatretus_burgeri
ENSCING00000005175-9288.832ENSEASG00005015272DDX39A9188.689Equus_asinus_asinus
ENSCING00000005175-9288.832ENSECAG00000040285DDX39A9188.689Equus_caballus
ENSCING00000005175-9781.928ENSEEUG00000015035DDX39A9285.271Erinaceus_europaeus
ENSCING00000005175-9886.842ENSELUG00000006779-8489.922Esox_lucius
ENSCING00000005175-9886.811ENSELUG00000010581DDX39A9289.014Esox_lucius
ENSCING00000005175-9289.086ENSFCAG00000013488DDX39A9188.946Felis_catus
ENSCING00000005175-9289.340ENSFDAG00000014649DDX39A9189.203Fukomys_damarensis
ENSCING00000005175-9287.817ENSFHEG00000002643ddx39aa9187.918Fundulus_heteroclitus
ENSCING00000005175-9389.620ENSFHEG00000009716-9189.974Fundulus_heteroclitus
ENSCING00000005175-9288.265ENSGMOG00000011287-9088.372Gadus_morhua
ENSCING00000005175-9289.059ENSGMOG00000014316DDX39A9189.406Gadus_morhua
ENSCING00000005175-9885.612ENSGAFG00000010170ddx39aa9188.689Gambusia_affinis
ENSCING00000005175-9880.576ENSGAFG00000014768-9183.290Gambusia_affinis
ENSCING00000005175-9388.861ENSGACG00000006096DDX39A9189.203Gasterosteus_aculeatus
ENSCING00000005175-9288.071ENSGACG00000019335ddx39aa9188.175Gasterosteus_aculeatus
ENSCING00000005175-9389.114ENSGAGG00000007527DDX39A9188.946Gopherus_agassizii
ENSCING00000005175-9886.091ENSGGOG00000005414DDX39A9188.689Gorilla_gorilla
ENSCING00000005175-9390.127ENSHBUG00000020257DDX39A9190.488Haplochromis_burtoni
ENSCING00000005175-9288.071ENSHBUG00000003748ddx39aa9188.175Haplochromis_burtoni
ENSCING00000005175-9289.086ENSHGLG00000018263DDX39A9188.946Heterocephalus_glaber_female
ENSCING00000005175-9284.439ENSHGLG00100007165DDX39A8488.493Heterocephalus_glaber_male
ENSCING00000005175-9983.333ENSHCOG00000018674ddx39aa9186.375Hippocampus_comes
ENSCING00000005175-9884.173ENSHCOG00000009111-9187.404Hippocampus_comes
ENSCING00000005175-9387.595ENSIPUG00000021552ddx39aa9187.918Ictalurus_punctatus
ENSCING00000005175-9389.873ENSIPUG00000021341DDX39A9190.231Ictalurus_punctatus
ENSCING00000005175-9289.086ENSSTOG00000013762DDX39A9188.946Ictidomys_tridecemlineatus
ENSCING00000005175-9774.519ENSJJAG00000017826-8778.706Jaculus_jaculus
ENSCING00000005175-9886.331ENSJJAG00000004337-9188.689Jaculus_jaculus
ENSCING00000005175-9388.354ENSKMAG00000000831-9188.689Kryptolebias_marmoratus
ENSCING00000005175-9389.367ENSKMAG00000011231DDX39A8889.717Kryptolebias_marmoratus
ENSCING00000005175-9387.848ENSLBEG00000002817DDX39A8688.175Labrus_bergylta
ENSCING00000005175-9288.325ENSLBEG00000025618-9188.432Labrus_bergylta
ENSCING00000005175-9887.770ENSLACG00000015063DDX39A9190.488Latimeria_chalumnae
ENSCING00000005175-9388.861ENSLOCG00000006534DDX39A9189.203Lepisosteus_oculatus
ENSCING00000005175-9388.354ENSLAFG00000022777DDX39A9188.432Loxodonta_africana
ENSCING00000005175-9886.091ENSMFAG00000044174DDX39A9188.689Macaca_fascicularis
ENSCING00000005175-9886.091ENSMMUG00000005723DDX39A9188.689Macaca_mulatta
ENSCING00000005175-9886.091ENSMNEG00000044292DDX39A9188.689Macaca_nemestrina
ENSCING00000005175-9886.091ENSMLEG00000007602DDX39A9188.689Mandrillus_leucophaeus
ENSCING00000005175-9288.579ENSMAMG00000000971ddx39aa9188.689Mastacembelus_armatus
ENSCING00000005175-9389.367ENSMAMG00000009916DDX39A9189.717Mastacembelus_armatus
ENSCING00000005175-9288.071ENSMZEG00005023935ddx39aa9188.175Maylandia_zebra
ENSCING00000005175-9390.127ENSMZEG00005002864DDX39A9190.488Maylandia_zebra
ENSCING00000005175-9886.331ENSMAUG00000008459Ddx399188.689Mesocricetus_auratus
ENSCING00000005175-9289.086ENSMICG00000015325DDX39A9188.946Microcebus_murinus
ENSCING00000005175-9786.265ENSMOCG00000016890Ddx398588.630Microtus_ochrogaster
ENSCING00000005175-9289.086ENSMMOG00000008895-9189.203Mola_mola
ENSCING00000005175-9885.167ENSMMOG00000006328DDX39A9188.175Mola_mola
ENSCING00000005175-9389.367ENSMODG00000002448DDX39A8089.203Monodelphis_domestica
ENSCING00000005175-9389.620ENSMALG00000002697DDX39A9189.974Monopterus_albus
ENSCING00000005175-9288.579ENSMALG00000022576ddx39aa9188.689Monopterus_albus
ENSCING00000005175-9886.571MGP_CAROLIEiJ_G0031277Ddx399188.946Mus_caroli
ENSCING00000005175-9886.571ENSMUSG00000005481Ddx399188.946Mus_musculus
ENSCING00000005175-9886.571MGP_PahariEiJ_G0022883Ddx399188.946Mus_pahari
ENSCING00000005175-9886.571MGP_SPRETEiJ_G0032396Ddx399188.946Mus_spretus
ENSCING00000005175-9289.340ENSMPUG00000003051DDX39A9189.203Mustela_putorius_furo
ENSCING00000005175-9675.490ENSMLUG00000013597-9177.121Myotis_lucifugus
ENSCING00000005175-9288.832ENSMLUG00000009280-8988.689Myotis_lucifugus
ENSCING00000005175-9285.025ENSMLUG00000026217-9184.833Myotis_lucifugus
ENSCING00000005175-9282.995ENSMLUG00000029622-9183.033Myotis_lucifugus
ENSCING00000005175-9283.503ENSMLUG00000000939-9183.290Myotis_lucifugus
ENSCING00000005175-9286.294ENSMLUG00000028448-9186.118Myotis_lucifugus
ENSCING00000005175-9886.603ENSNGAG00000010734Ddx399188.689Nannospalax_galili
ENSCING00000005175-9390.127ENSNBRG00000010679DDX39A9190.488Neolamprologus_brichardi
ENSCING00000005175-9288.071ENSNBRG00000001661ddx39aa9188.175Neolamprologus_brichardi
ENSCING00000005175-9880.815ENSNLEG00000013515DDX39A9183.033Nomascus_leucogenys
ENSCING00000005175-9276.336ENSMEUG00000005450DDX39A9275.969Notamacropus_eugenii
ENSCING00000005175-9286.802ENSODEG00000009068-9186.632Octodon_degus
ENSCING00000005175-9288.071ENSODEG00000019523-9187.918Octodon_degus
ENSCING00000005175-9281.726ENSODEG00000017817-9181.491Octodon_degus
ENSCING00000005175-9288.071ENSONIG00000018177ddx39aa9188.175Oreochromis_niloticus
ENSCING00000005175-9390.127ENSONIG00000008122DDX39A9190.488Oreochromis_niloticus
ENSCING00000005175-9775.181ENSOANG00000005137DDX39A8878.701Ornithorhynchus_anatinus
ENSCING00000005175-8462.881ENSOCUG00000002496DDX39A10062.881Oryctolagus_cuniculus
ENSCING00000005175-9387.848ENSORLG00000000279ddx39aa9188.175Oryzias_latipes
ENSCING00000005175-9885.132ENSORLG00000010565DDX39A9188.432Oryzias_latipes
ENSCING00000005175-9387.848ENSORLG00020019315ddx39aa9188.175Oryzias_latipes_hni
ENSCING00000005175-9885.132ENSORLG00020004181DDX39A9188.432Oryzias_latipes_hni
ENSCING00000005175-9885.132ENSORLG00015000447-9188.432Oryzias_latipes_hsok
ENSCING00000005175-9387.848ENSORLG00015019274ddx39aa9188.175Oryzias_latipes_hsok
ENSCING00000005175-9388.861ENSOMEG00000009789-9189.203Oryzias_melastigma
ENSCING00000005175-9387.848ENSOMEG00000010444ddx39aa9188.175Oryzias_melastigma
ENSCING00000005175-9289.086ENSOGAG00000010280-9188.946Otolemur_garnettii
ENSCING00000005175-9878.177ENSOGAG00000029626-9180.463Otolemur_garnettii
ENSCING00000005175-9876.739ENSOGAG00000025638-9279.434Otolemur_garnettii
ENSCING00000005175-9288.579ENSOARG00000005744DDX39A8388.432Ovis_aries
ENSCING00000005175-9886.091ENSPPAG00000040065DDX39A9188.689Pan_paniscus
ENSCING00000005175-9289.086ENSPPRG00000003506DDX39A9188.946Panthera_pardus
ENSCING00000005175-9289.086ENSPTIG00000017287DDX39A9188.946Panthera_tigris_altaica
ENSCING00000005175-9886.091ENSPTRG00000010590DDX39A9188.689Pan_troglodytes
ENSCING00000005175-9886.091ENSPTRG00000042673-9188.689Pan_troglodytes
ENSCING00000005175-9886.091ENSPANG00000015036DDX39A9188.689Papio_anubis
ENSCING00000005175-9389.114ENSPKIG00000007272-9189.460Paramormyrops_kingsleyae
ENSCING00000005175-9887.321ENSPKIG00000006284DDX39A9189.974Paramormyrops_kingsleyae
ENSCING00000005175-7287.622ENSPSIG00000011417DDX39A9987.622Pelodiscus_sinensis
ENSCING00000005175-9389.873ENSPMGG00000016520DDX39A9190.231Periophthalmus_magnuspinnatus
ENSCING00000005175-9884.892ENSPMGG00000021765-9088.175Periophthalmus_magnuspinnatus
ENSCING00000005175-9873.206ENSPEMG00000014184-9175.000Peromyscus_maniculatus_bairdii
ENSCING00000005175-9886.331ENSPEMG00000017767-9188.689Peromyscus_maniculatus_bairdii
ENSCING00000005175-9879.236ENSPMAG00000009017ddx39aa9182.097Petromyzon_marinus
ENSCING00000005175-9389.367ENSPCIG00000029788DDX39A9189.203Phascolarctos_cinereus
ENSCING00000005175-9886.571ENSPFOG00000010070DDX39A9189.717Poecilia_formosa
ENSCING00000005175-9885.612ENSPFOG00000000914ddx39aa9188.689Poecilia_formosa
ENSCING00000005175-9885.612ENSPLAG00000008645-9188.689Poecilia_latipinna
ENSCING00000005175-9886.571ENSPLAG00000009821DDX39A9189.717Poecilia_latipinna
ENSCING00000005175-9886.571ENSPMEG00000010187DDX39A9189.717Poecilia_mexicana
ENSCING00000005175-9885.612ENSPMEG00000021471-9188.689Poecilia_mexicana
ENSCING00000005175-9886.571ENSPREG00000013989DDX39A9189.717Poecilia_reticulata
ENSCING00000005175-9885.612ENSPREG00000017406ddx39aa9188.689Poecilia_reticulata
ENSCING00000005175-9886.091ENSPPYG00000009642DDX39A9188.689Pongo_abelii
ENSCING00000005175-9869.305ENSPCAG00000005768DDX39A9170.437Procavia_capensis
ENSCING00000005175-9288.832ENSPCOG00000024047-9188.689Propithecus_coquereli
ENSCING00000005175-9286.548ENSPCOG00000027926-9186.375Propithecus_coquereli
ENSCING00000005175-9288.832ENSPVAG00000006950DDX39A9188.689Pteropus_vampyrus
ENSCING00000005175-9390.127ENSPNYG00000001498DDX39A9190.488Pundamilia_nyererei
ENSCING00000005175-9288.071ENSPNYG00000016438-9188.175Pundamilia_nyererei
ENSCING00000005175-9389.620ENSPNAG00000014271DDX39A9189.974Pygocentrus_nattereri
ENSCING00000005175-9388.861ENSPNAG00000022623-9189.203Pygocentrus_nattereri
ENSCING00000005175-9886.331ENSRNOG00000004373Ddx39a9188.689Rattus_norvegicus
ENSCING00000005175-9886.091ENSRBIG00000036352DDX39A9188.689Rhinopithecus_bieti
ENSCING00000005175-9886.091ENSRROG00000027985DDX39A9188.689Rhinopithecus_roxellana
ENSCING00000005175-9388.861ENSSBOG00000034939DDX39A9188.946Saimiri_boliviensis_boliviensis
ENSCING00000005175-9389.367ENSSHAG00000005494DDX39A9189.203Sarcophilus_harrisii
ENSCING00000005175-9389.873ENSSFOG00015007928ddx39a9190.231Scleropages_formosus
ENSCING00000005175-9289.848ENSSFOG00015005701DDX39A9189.974Scleropages_formosus
ENSCING00000005175-9885.372ENSSMAG00000016567ddx39aa9188.432Scophthalmus_maximus
ENSCING00000005175-9389.367ENSSMAG00000002831DDX39A9189.717Scophthalmus_maximus
ENSCING00000005175-9288.325ENSSDUG00000020224ddx39aa9188.432Seriola_dumerili
ENSCING00000005175-8089.796ENSSDUG00000009075DDX39A9989.796Seriola_dumerili
ENSCING00000005175-9172.423ENSSLDG00000006386-9372.423Seriola_lalandi_dorsalis
ENSCING00000005175-8087.464ENSSLDG00000002882-9987.464Seriola_lalandi_dorsalis
ENSCING00000005175-9389.620ENSSLDG00000017643DDX39A9189.974Seriola_lalandi_dorsalis
ENSCING00000005175-9288.325ENSSPAG00000006186-9188.432Stegastes_partitus
ENSCING00000005175-9389.620ENSSPAG00000019372DDX39A9189.974Stegastes_partitus
ENSCING00000005175-9287.563ENSTRUG00000022930DDX39A9187.661Takifugu_rubripes
ENSCING00000005175-8070.088ENSTRUG00000000807-9470.088Takifugu_rubripes
ENSCING00000005175-9381.407ENSTRUG00000019985-9082.940Takifugu_rubripes
ENSCING00000005175-9288.832ENSTTRG00000007931DDX39A9188.689Tursiops_truncatus
ENSCING00000005175-9289.086ENSUAMG00000020022DDX39A9188.946Ursus_americanus
ENSCING00000005175-9289.086ENSUMAG00000004317DDX39A9088.946Ursus_maritimus
ENSCING00000005175-9289.086ENSVVUG00000026939DDX39A9188.946Vulpes_vulpes
ENSCING00000005175-9985.176ENSXETG00000020607ddx39a9188.946Xenopus_tropicalis
ENSCING00000005175-9886.571ENSXCOG00000015586DDX39A9189.717Xiphophorus_couchianus
ENSCING00000005175-9885.612ENSXMAG00000006547ddx39aa9188.689Xiphophorus_maculatus
ENSCING00000005175-9886.571ENSXMAG00000008939DDX39A9189.717Xiphophorus_maculatus

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