EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 873 bases
Position: chr2:2660622-2661494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010783	Ribosomal_L27A	PF00828.19	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010783	-	873	-	ENSCINP00000010783	290 (aa)	-	F6XVG4

Gene Model

Click here to download ENSCING00000005247's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005247	-	98	46.758	ENSG00000137547	MRPL15	97	51.502	Homo_sapiens
ENSCING00000005247	-	94	42.294	ENSAPOG00000018246	mrpl15	94	42.294	Acanthochromis_polyacanthus
ENSCING00000005247	-	98	47.279	ENSAMEG00000012437	MRPL15	97	48.276	Ailuropoda_melanoleuca
ENSCING00000005247	-	79	46.053	ENSACIG00000017427	mrpl15	83	46.053	Amphilophus_citrinellus
ENSCING00000005247	-	94	42.294	ENSAOCG00000006281	mrpl15	94	42.294	Amphiprion_ocellaris
ENSCING00000005247	-	94	42.652	ENSAPEG00000013090	mrpl15	94	42.652	Amphiprion_percula
ENSCING00000005247	-	94	44.086	ENSATEG00000002782	mrpl15	94	44.086	Anabas_testudineus
ENSCING00000005247	-	80	50.644	ENSAPLG00000004466	MRPL15	89	50.644	Anas_platyrhynchos
ENSCING00000005247	-	95	46.619	ENSACAG00000017974	MRPL15	94	48.387	Anolis_carolinensis
ENSCING00000005247	-	98	48.443	ENSANAG00000031982	MRPL15	97	48.789	Aotus_nancymaae
ENSCING00000005247	-	95	41.844	ENSACLG00000002789	mrpl15	95	41.844	Astatotilapia_calliptera
ENSCING00000005247	-	95	44.523	ENSAMXG00000034239	mrpl15	95	44.523	Astyanax_mexicanus
ENSCING00000005247	-	95	47.719	ENSBTAG00000001174	MRPL15	94	48.754	Bos_taurus
ENSCING00000005247	-	95	34.982	WBGene00022373	mrpl-15	92	34.982	Caenorhabditis_elegans
ENSCING00000005247	-	97	43.860	ENSCJAG00000002016	-	96	44.211	Callithrix_jacchus
ENSCING00000005247	-	80	48.739	ENSCJAG00000048038	-	98	49.160	Callithrix_jacchus
ENSCING00000005247	-	98	47.440	ENSCAFG00000006988	MRPL15	99	48.443	Canis_familiaris
ENSCING00000005247	-	64	41.935	ENSCAFG00020013324	-	88	43.011	Canis_lupus_dingo
ENSCING00000005247	-	98	47.440	ENSCAFG00020015460	-	97	48.443	Canis_lupus_dingo
ENSCING00000005247	-	95	47.719	ENSCHIG00000008708	-	94	48.754	Capra_hircus
ENSCING00000005247	-	95	47.368	ENSCHIG00000000811	-	94	48.399	Capra_hircus
ENSCING00000005247	-	98	47.405	ENSTSYG00000025768	-	97	47.751	Carlito_syrichta
ENSCING00000005247	-	63	43.850	ENSTSYG00000012937	-	92	44.385	Carlito_syrichta
ENSCING00000005247	-	99	41.497	ENSTSYG00000028611	-	98	42.088	Carlito_syrichta
ENSCING00000005247	-	71	47.087	ENSCAPG00000010760	MRPL15	99	47.087	Cavia_aperea
ENSCING00000005247	-	93	47.636	ENSCPOG00000035946	MRPL15	95	48.399	Cavia_porcellus
ENSCING00000005247	-	98	47.751	ENSCCAG00000036893	-	97	48.097	Cebus_capucinus
ENSCING00000005247	-	59	50.581	ENSCCAG00000029423	-	94	41.818	Cebus_capucinus
ENSCING00000005247	-	95	48.421	ENSCATG00000029666	MRPL15	95	49.466	Cercocebus_atys
ENSCING00000005247	-	80	52.790	ENSCLAG00000010064	MRPL15	90	52.340	Chinchilla_lanigera
ENSCING00000005247	-	95	48.421	ENSCSAG00000014671	MRPL15	95	49.466	Chlorocebus_sabaeus
ENSCING00000005247	-	96	48.057	ENSCHOG00000005299	MRPL15	98	48.410	Choloepus_hoffmanni
ENSCING00000005247	-	94	47.670	ENSCPBG00000005085	MRPL15	93	48.571	Chrysemys_picta_bellii
ENSCING00000005247	-	80	43.777	ENSCANG00000039519	MRPL15	95	40.502	Colobus_angolensis_palliatus
ENSCING00000005247	-	79	43.038	ENSCANG00000036853	-	77	44.206	Colobus_angolensis_palliatus
ENSCING00000005247	-	94	40.074	ENSCGRG00001008370	-	94	40.074	Cricetulus_griseus_chok1gshd
ENSCING00000005247	-	95	46.786	ENSCGRG00001020498	-	94	47.535	Cricetulus_griseus_chok1gshd
ENSCING00000005247	-	94	40.074	ENSCGRG00000012920	-	94	40.074	Cricetulus_griseus_crigri
ENSCING00000005247	-	94	37.276	ENSCGRG00000017887	-	93	37.276	Cricetulus_griseus_crigri
ENSCING00000005247	-	80	50.644	ENSCGRG00000002997	-	89	50.862	Cricetulus_griseus_crigri
ENSCING00000005247	-	94	42.553	ENSCSEG00000019973	mrpl15	94	42.553	Cynoglossus_semilaevis
ENSCING00000005247	-	94	41.786	ENSCVAG00000009515	mrpl15	94	41.786	Cyprinodon_variegatus
ENSCING00000005247	-	95	43.772	ENSDARG00000101306	mrpl15	95	43.772	Danio_rerio
ENSCING00000005247	-	95	49.110	ENSDNOG00000048750	MRPL15	95	49.466	Dasypus_novemcinctus
ENSCING00000005247	-	95	48.399	ENSDORG00000012200	Mrpl15	95	48.754	Dipodomys_ordii
ENSCING00000005247	-	91	44.485	FBgn0036990	mRpL15	94	44.485	Drosophila_melanogaster
ENSCING00000005247	-	80	51.931	ENSETEG00000001724	MRPL15	89	51.931	Echinops_telfairi
ENSCING00000005247	-	81	42.308	ENSEBUG00000000878	mrpl15	88	42.308	Eptatretus_burgeri
ENSCING00000005247	-	97	47.059	ENSECAG00000012110	MRPL15	96	48.070	Equus_caballus
ENSCING00000005247	-	95	47.687	ENSEEUG00000001454	MRPL15	95	47.687	Erinaceus_europaeus
ENSCING00000005247	-	95	44.366	ENSELUG00000007952	mrpl15	95	44.366	Esox_lucius
ENSCING00000005247	-	95	48.772	ENSFCAG00000033969	MRPL15	95	49.822	Felis_catus
ENSCING00000005247	-	95	48.399	ENSFALG00000010221	MRPL15	95	49.291	Ficedula_albicollis
ENSCING00000005247	-	98	47.059	ENSFDAG00000009950	MRPL15	97	47.260	Fukomys_damarensis
ENSCING00000005247	-	52	34.615	ENSFHEG00000011673	mrpl15	90	36.538	Fundulus_heteroclitus
ENSCING00000005247	-	95	41.993	ENSGMOG00000005882	mrpl15	98	41.993	Gadus_morhua
ENSCING00000005247	-	95	46.316	ENSGALG00000041086	MRPL15	93	47.842	Gallus_gallus
ENSCING00000005247	-	95	41.197	ENSGAFG00000000822	mrpl15	95	41.197	Gambusia_affinis
ENSCING00000005247	-	95	43.617	ENSGACG00000004336	mrpl15	98	43.617	Gasterosteus_aculeatus
ENSCING00000005247	-	94	46.763	ENSGAGG00000014120	MRPL15	75	47.842	Gopherus_agassizii
ENSCING00000005247	-	98	46.758	ENSGGOG00000010403	MRPL15	97	47.751	Gorilla_gorilla
ENSCING00000005247	-	94	42.294	ENSHBUG00000015988	mrpl15	97	42.391	Haplochromis_burtoni
ENSCING00000005247	-	95	48.571	ENSHGLG00000012073	MRPL15	97	47.751	Heterocephalus_glaber_female
ENSCING00000005247	-	95	48.571	ENSHGLG00100003150	MRPL15	97	47.751	Heterocephalus_glaber_male
ENSCING00000005247	-	95	42.606	ENSHCOG00000001055	mrpl15	95	42.606	Hippocampus_comes
ENSCING00000005247	-	93	47.122	ENSIPUG00000016231	mrpl15	93	47.122	Ictalurus_punctatus
ENSCING00000005247	-	98	48.097	ENSSTOG00000015737	MRPL15	97	48.288	Ictidomys_tridecemlineatus
ENSCING00000005247	-	95	49.110	ENSJJAG00000016599	Mrpl15	95	49.648	Jaculus_jaculus
ENSCING00000005247	-	96	41.958	ENSKMAG00000015306	mrpl15	96	41.958	Kryptolebias_marmoratus
ENSCING00000005247	-	95	42.908	ENSLBEG00000023390	mrpl15	94	42.908	Labrus_bergylta
ENSCING00000005247	-	96	49.129	ENSLACG00000016201	MRPL15	96	50.000	Latimeria_chalumnae
ENSCING00000005247	-	94	47.857	ENSLOCG00000005663	mrpl15	93	47.857	Lepisosteus_oculatus
ENSCING00000005247	-	98	46.367	ENSLAFG00000008830	MRPL15	97	47.059	Loxodonta_africana
ENSCING00000005247	-	95	48.421	ENSMFAG00000000491	MRPL15	95	49.466	Macaca_fascicularis
ENSCING00000005247	-	95	48.421	ENSMMUG00000005539	MRPL15	98	52.361	Macaca_mulatta
ENSCING00000005247	-	95	48.421	ENSMNEG00000037090	MRPL15	95	49.466	Macaca_nemestrina
ENSCING00000005247	-	95	48.421	ENSMLEG00000036736	MRPL15	95	49.466	Mandrillus_leucophaeus
ENSCING00000005247	-	95	42.049	ENSMAMG00000009482	mrpl15	94	43.011	Mastacembelus_armatus
ENSCING00000005247	-	95	41.844	ENSMZEG00005018245	mrpl15	95	41.844	Maylandia_zebra
ENSCING00000005247	-	95	46.316	ENSMGAG00000010936	MRPL15	93	48.201	Meleagris_gallopavo
ENSCING00000005247	-	97	46.690	ENSMAUG00000013305	Mrpl15	97	47.038	Mesocricetus_auratus
ENSCING00000005247	-	95	49.466	ENSMICG00000009779	MRPL15	98	50.178	Microcebus_murinus
ENSCING00000005247	-	95	48.399	ENSMOCG00000015777	Mrpl15	95	48.754	Microtus_ochrogaster
ENSCING00000005247	-	93	43.321	ENSMMOG00000004082	mrpl15	93	43.321	Mola_mola
ENSCING00000005247	-	97	47.079	ENSMODG00000009360	MRPL15	96	48.084	Monodelphis_domestica
ENSCING00000005247	-	94	43.165	ENSMALG00000016757	mrpl15	95	43.165	Monopterus_albus
ENSCING00000005247	-	95	47.857	MGP_CAROLIEiJ_G0013922	Mrpl15	95	48.214	Mus_caroli
ENSCING00000005247	-	95	47.143	ENSMUSG00000033845	Mrpl15	95	47.500	Mus_musculus
ENSCING00000005247	-	95	47.500	MGP_PahariEiJ_G0023896	Mrpl15	95	47.857	Mus_pahari
ENSCING00000005247	-	95	47.143	MGP_SPRETEiJ_G0014726	Mrpl15	95	47.500	Mus_spretus
ENSCING00000005247	-	98	47.440	ENSMPUG00000019078	-	97	48.443	Mustela_putorius_furo
ENSCING00000005247	-	98	47.099	ENSMPUG00000010533	-	97	48.097	Mustela_putorius_furo
ENSCING00000005247	-	95	49.110	ENSMLUG00000001482	MRPL15	95	49.466	Myotis_lucifugus
ENSCING00000005247	-	95	46.667	ENSNGAG00000016607	Mrpl15	95	48.043	Nannospalax_galili
ENSCING00000005247	-	95	41.727	ENSNBRG00000013893	mrpl15	95	41.727	Neolamprologus_brichardi
ENSCING00000005247	-	98	46.758	ENSNLEG00000029566	MRPL15	97	47.751	Nomascus_leucogenys
ENSCING00000005247	-	97	48.780	ENSOPRG00000000921	MRPL15	97	49.129	Ochotona_princeps
ENSCING00000005247	-	95	46.667	ENSODEG00000019860	-	95	47.687	Octodon_degus
ENSCING00000005247	-	94	42.652	ENSONIG00000006134	mrpl15	94	42.652	Oreochromis_niloticus
ENSCING00000005247	-	98	47.917	ENSOANG00000007286	MRPL15	97	48.264	Ornithorhynchus_anatinus
ENSCING00000005247	-	95	49.286	ENSOCUG00000001949	MRPL15	84	49.643	Oryctolagus_cuniculus
ENSCING00000005247	-	95	41.489	ENSORLG00000011523	mrpl15	94	43.011	Oryzias_latipes
ENSCING00000005247	-	95	41.489	ENSORLG00020008646	mrpl15	94	43.011	Oryzias_latipes_hni
ENSCING00000005247	-	95	41.489	ENSORLG00015008807	mrpl15	94	43.011	Oryzias_latipes_hsok
ENSCING00000005247	-	95	38.790	ENSOMEG00000002056	mrpl15	95	39.716	Oryzias_melastigma
ENSCING00000005247	-	98	48.097	ENSOGAG00000003768	MRPL15	97	48.443	Otolemur_garnettii
ENSCING00000005247	-	95	47.018	ENSOARG00000014298	-	94	48.043	Ovis_aries
ENSCING00000005247	-	95	47.719	ENSOARG00000014089	-	94	48.754	Ovis_aries
ENSCING00000005247	-	95	47.719	ENSPPAG00000034223	MRPL15	95	48.754	Pan_paniscus
ENSCING00000005247	-	98	47.782	ENSPPRG00000012324	MRPL15	97	48.789	Panthera_pardus
ENSCING00000005247	-	98	47.782	ENSPTIG00000014599	MRPL15	97	48.789	Panthera_tigris_altaica
ENSCING00000005247	-	98	46.758	ENSPTRG00000020253	MRPL15	97	47.751	Pan_troglodytes
ENSCING00000005247	-	95	48.421	ENSPANG00000015007	MRPL15	95	49.466	Papio_anubis
ENSCING00000005247	-	95	44.326	ENSPKIG00000010877	mrpl15	94	45.714	Paramormyrops_kingsleyae
ENSCING00000005247	-	95	46.975	ENSPSIG00000008837	MRPL15	93	48.561	Pelodiscus_sinensis
ENSCING00000005247	-	94	41.727	ENSPMGG00000013788	mrpl15	94	41.727	Periophthalmus_magnuspinnatus
ENSCING00000005247	-	95	48.043	ENSPEMG00000000583	Mrpl15	95	48.399	Peromyscus_maniculatus_bairdii
ENSCING00000005247	-	95	44.211	ENSPMAG00000002425	mrpl15	93	44.211	Petromyzon_marinus
ENSCING00000005247	-	95	47.719	ENSPCIG00000011783	MRPL15	94	48.754	Phascolarctos_cinereus
ENSCING00000005247	-	95	41.901	ENSPFOG00000013894	mrpl15	95	41.901	Poecilia_formosa
ENSCING00000005247	-	95	41.901	ENSPLAG00000011935	mrpl15	95	41.901	Poecilia_latipinna
ENSCING00000005247	-	95	41.901	ENSPMEG00000018051	mrpl15	95	41.901	Poecilia_mexicana
ENSCING00000005247	-	95	41.197	ENSPREG00000006654	mrpl15	95	41.197	Poecilia_reticulata
ENSCING00000005247	-	95	48.070	ENSPPYG00000018591	MRPL15	95	49.110	Pongo_abelii
ENSCING00000005247	-	57	45.614	ENSPCAG00000014651	MRPL15	97	44.444	Procavia_capensis
ENSCING00000005247	-	95	48.421	ENSPCOG00000027252	MRPL15	95	49.466	Propithecus_coquereli
ENSCING00000005247	-	95	49.123	ENSPVAG00000007783	MRPL15	95	50.178	Pteropus_vampyrus
ENSCING00000005247	-	94	42.294	ENSPNYG00000001724	mrpl15	94	42.294	Pundamilia_nyererei
ENSCING00000005247	-	80	44.167	ENSPNAG00000021174	mrpl15	77	44.167	Pygocentrus_nattereri
ENSCING00000005247	-	95	47.857	ENSRNOG00000008566	Mrpl15	95	48.043	Rattus_norvegicus
ENSCING00000005247	-	95	47.719	ENSRBIG00000032644	MRPL15	95	48.754	Rhinopithecus_bieti
ENSCING00000005247	-	95	47.719	ENSRROG00000037126	MRPL15	95	48.754	Rhinopithecus_roxellana
ENSCING00000005247	-	98	48.097	ENSSBOG00000023543	MRPL15	97	48.443	Saimiri_boliviensis_boliviensis
ENSCING00000005247	-	95	46.154	ENSSHAG00000013435	MRPL15	94	47.163	Sarcophilus_harrisii
ENSCING00000005247	-	96	43.860	ENSSFOG00015023246	mrpl15	96	44.755	Scleropages_formosus
ENSCING00000005247	-	94	42.652	ENSSMAG00000017891	mrpl15	94	42.652	Scophthalmus_maximus
ENSCING00000005247	-	96	41.696	ENSSDUG00000008800	mrpl15	93	42.756	Seriola_dumerili
ENSCING00000005247	-	95	41.135	ENSSLDG00000023535	mrpl15	94	42.652	Seriola_lalandi_dorsalis
ENSCING00000005247	-	98	47.079	ENSSPUG00000015892	MRPL15	99	47.079	Sphenodon_punctatus
ENSCING00000005247	-	93	42.238	ENSSPAG00000004300	mrpl15	93	42.238	Stegastes_partitus
ENSCING00000005247	-	95	48.754	ENSSSCG00000030578	-	95	49.110	Sus_scrofa
ENSCING00000005247	-	94	32.353	ENSSSCG00000033992	-	92	31.985	Sus_scrofa
ENSCING00000005247	-	95	49.110	ENSTGUG00000011032	-	94	50.000	Taeniopygia_guttata
ENSCING00000005247	-	71	54.146	ENSTGUG00000016104	-	99	54.146	Taeniopygia_guttata
ENSCING00000005247	-	97	42.014	ENSTRUG00000007522	mrpl15	97	42.014	Takifugu_rubripes
ENSCING00000005247	-	71	50.485	ENSTBEG00000010541	MRPL15	69	50.485	Tupaia_belangeri
ENSCING00000005247	-	95	46.975	ENSTTRG00000011844	MRPL15	95	47.535	Tursiops_truncatus
ENSCING00000005247	-	95	49.123	ENSUMAG00000009710	MRPL15	97	49.135	Ursus_maritimus
ENSCING00000005247	-	95	40.214	ENSVPAG00000006911	MRPL15	95	40.569	Vicugna_pacos
ENSCING00000005247	-	95	48.772	ENSVVUG00000017791	MRPL15	95	49.822	Vulpes_vulpes
ENSCING00000005247	-	96	46.667	ENSXETG00000008103	mrpl15	95	47.552	Xenopus_tropicalis
ENSCING00000005247	-	98	41.237	ENSXCOG00000010029	mrpl15	99	41.237	Xiphophorus_couchianus
ENSCING00000005247	-	98	41.237	ENSXMAG00000002087	mrpl15	99	41.237	Xiphophorus_maculatus