EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005248 (Gene tree)
Gene ID: 100176850
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5319 bases
Position: chr2:2653682-2659000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010787	MA3	PF02847.17	1.2e-17	1	1
ENSCINP00000010787	MIF4G	PF02854.19	5.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010787	-	2456	-	ENSCINP00000010787	731 (aa)	-	F6XVD3

Gene Model

Click here to download ENSCING00000005248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005248	-	70	42.430	ENSG00000146909	NOM1	61	42.430	Homo_sapiens
ENSCING00000005248	-	70	41.506	ENSAPOG00000012073	nom1	61	41.506	Acanthochromis_polyacanthus
ENSCING00000005248	-	91	37.500	ENSAMEG00000001412	NOM1	73	40.516	Ailuropoda_melanoleuca
ENSCING00000005248	-	70	40.267	ENSAOCG00000006229	nom1	61	40.385	Amphiprion_ocellaris
ENSCING00000005248	-	70	40.267	ENSAPEG00000015994	nom1	86	36.104	Amphiprion_percula
ENSCING00000005248	-	72	39.925	ENSATEG00000005405	nom1	85	36.740	Anabas_testudineus
ENSCING00000005248	-	88	36.053	ENSAPLG00000006585	NOM1	97	36.189	Anas_platyrhynchos
ENSCING00000005248	-	76	38.726	ENSACAG00000011192	NOM1	59	40.196	Anolis_carolinensis
ENSCING00000005248	-	67	42.400	ENSACLG00000000033	nom1	85	38.248	Astatotilapia_calliptera
ENSCING00000005248	-	70	40.114	ENSAMXG00000041486	nom1	85	36.412	Astyanax_mexicanus
ENSCING00000005248	-	88	38.024	ENSBTAG00000016435	NOM1	81	35.802	Bos_taurus
ENSCING00000005248	-	97	37.483	ENSCJAG00000004336	NOM1	60	40.918	Callithrix_jacchus
ENSCING00000005248	-	91	37.698	ENSCAFG00020005121	NOM1	60	41.412	Canis_lupus_dingo
ENSCING00000005248	-	88	36.999	ENSCHIG00000020102	NOM1	81	35.402	Capra_hircus
ENSCING00000005248	-	97	36.214	ENSTSYG00000000227	NOM1	83	36.575	Carlito_syrichta
ENSCING00000005248	-	69	40.504	ENSCAPG00000016273	NOM1	98	40.504	Cavia_aperea
ENSCING00000005248	-	91	36.483	ENSCPOG00000025538	NOM1	82	35.040	Cavia_porcellus
ENSCING00000005248	-	56	43.294	ENSCCAG00000014944	NOM1	97	43.503	Cebus_capucinus
ENSCING00000005248	-	91	35.942	ENSCLAG00000000267	NOM1	61	39.575	Chinchilla_lanigera
ENSCING00000005248	-	68	40.705	ENSCPBG00000018215	NOM1	58	40.588	Chrysemys_picta_bellii
ENSCING00000005248	-	69	42.366	ENSCANG00000041984	NOM1	88	42.366	Colobus_angolensis_palliatus
ENSCING00000005248	-	92	35.452	ENSCGRG00001020293	Nom1	80	34.993	Cricetulus_griseus_chok1gshd
ENSCING00000005248	-	70	38.868	ENSCGRG00000005405	Nom1	98	39.245	Cricetulus_griseus_crigri
ENSCING00000005248	-	86	36.150	ENSCSEG00000000932	nom1	80	35.226	Cynoglossus_semilaevis
ENSCING00000005248	-	91	37.787	ENSCVAG00000007562	nom1	87	36.474	Cyprinodon_variegatus
ENSCING00000005248	-	70	41.603	ENSDARG00000060027	nom1	98	41.336	Danio_rerio
ENSCING00000005248	-	72	33.577	FBgn0035336	CG9004	63	33.577	Drosophila_melanogaster
ENSCING00000005248	-	55	36.650	ENSEBUG00000010077	nom1	90	36.650	Eptatretus_burgeri
ENSCING00000005248	-	91	36.561	ENSEASG00005001489	NOM1	84	35.128	Equus_asinus_asinus
ENSCING00000005248	-	74	38.929	ENSECAG00000007596	NOM1	79	33.812	Equus_caballus
ENSCING00000005248	-	72	40.706	ENSELUG00000006266	nom1	63	40.706	Esox_lucius
ENSCING00000005248	-	91	36.735	ENSFCAG00000006467	NOM1	65	40.000	Felis_catus
ENSCING00000005248	-	88	36.496	ENSFALG00000006904	NOM1	75	40.338	Ficedula_albicollis
ENSCING00000005248	-	97	34.156	ENSFDAG00000016241	NOM1	60	39.718	Fukomys_damarensis
ENSCING00000005248	-	75	39.138	ENSFHEG00000015974	nom1	87	37.284	Fundulus_heteroclitus
ENSCING00000005248	-	73	39.513	ENSGMOG00000005129	nom1	66	40.275	Gadus_morhua
ENSCING00000005248	-	89	35.417	ENSGALG00000006437	NOM1	81	32.935	Gallus_gallus
ENSCING00000005248	-	76	39.254	ENSGAFG00000003211	nom1	86	36.690	Gambusia_affinis
ENSCING00000005248	-	90	35.786	ENSGAGG00000014347	NOM1	62	41.487	Gopherus_agassizii
ENSCING00000005248	-	70	41.948	ENSGGOG00000010920	NOM1	77	37.250	Gorilla_gorilla
ENSCING00000005248	-	92	38.574	ENSHBUG00000014616	nom1	87	37.755	Haplochromis_burtoni
ENSCING00000005248	-	99	35.817	ENSHGLG00000007392	NOM1	85	35.611	Heterocephalus_glaber_female
ENSCING00000005248	-	99	35.817	ENSHGLG00100014407	NOM1	82	41.615	Heterocephalus_glaber_male
ENSCING00000005248	-	67	42.346	ENSIPUG00000013980	nom1	85	37.190	Ictalurus_punctatus
ENSCING00000005248	-	69	40.840	ENSSTOG00000031736	NOM1	90	40.535	Ictidomys_tridecemlineatus
ENSCING00000005248	-	65	40.871	ENSJJAG00000011716	Nom1	97	40.871	Jaculus_jaculus
ENSCING00000005248	-	70	39.347	ENSLBEG00000009252	nom1	60	39.347	Labrus_bergylta
ENSCING00000005248	-	91	36.146	ENSLACG00000011777	NOM1	63	39.619	Latimeria_chalumnae
ENSCING00000005248	-	96	36.376	ENSLOCG00000012452	nom1	86	36.300	Lepisosteus_oculatus
ENSCING00000005248	-	69	38.580	ENSLAFG00000007119	NOM1	63	38.580	Loxodonta_africana
ENSCING00000005248	-	69	39.313	ENSMMUG00000039033	NOM1	59	39.313	Macaca_mulatta
ENSCING00000005248	-	69	42.557	ENSMLEG00000037062	NOM1	97	42.557	Mandrillus_leucophaeus
ENSCING00000005248	-	94	36.301	ENSMAMG00000004118	nom1	84	36.453	Mastacembelus_armatus
ENSCING00000005248	-	67	42.200	ENSMZEG00005000384	nom1	82	38.265	Maylandia_zebra
ENSCING00000005248	-	95	34.605	ENSMGAG00000005051	NOM1	75	39.504	Meleagris_gallopavo
ENSCING00000005248	-	92	35.311	ENSMAUG00000017988	Nom1	83	35.068	Mesocricetus_auratus
ENSCING00000005248	-	75	38.652	ENSMOCG00000015962	Nom1	82	35.223	Microtus_ochrogaster
ENSCING00000005248	-	86	37.014	ENSMMOG00000004419	nom1	74	36.940	Mola_mola
ENSCING00000005248	-	74	39.138	ENSMODG00000005177	NOM1	61	40.458	Monodelphis_domestica
ENSCING00000005248	-	87	36.667	ENSMALG00000008800	nom1	84	36.136	Monopterus_albus
ENSCING00000005248	-	98	34.667	MGP_CAROLIEiJ_G0027043	Nom1	61	38.868	Mus_caroli
ENSCING00000005248	-	98	35.007	ENSMUSG00000001569	Nom1	84	34.524	Mus_musculus
ENSCING00000005248	-	98	34.783	MGP_SPRETEiJ_G0028039	Nom1	82	35.190	Mus_spretus
ENSCING00000005248	-	88	37.500	ENSMPUG00000009745	NOM1	94	36.756	Mustela_putorius_furo
ENSCING00000005248	-	82	37.886	ENSMLUG00000009129	NOM1	86	39.771	Myotis_lucifugus
ENSCING00000005248	-	96	36.755	ENSNBRG00000016429	nom1	93	41.154	Neolamprologus_brichardi
ENSCING00000005248	-	70	41.386	ENSNLEG00000000238	NOM1	61	41.386	Nomascus_leucogenys
ENSCING00000005248	-	78	35.393	ENSMEUG00000001108	NOM1	73	35.393	Notamacropus_eugenii
ENSCING00000005248	-	91	35.371	ENSODEG00000009399	NOM1	74	40.000	Octodon_degus
ENSCING00000005248	-	71	40.762	ENSONIG00000005958	nom1	90	37.827	Oreochromis_niloticus
ENSCING00000005248	-	62	40.430	ENSOANG00000006139	-	97	40.086	Ornithorhynchus_anatinus
ENSCING00000005248	-	91	37.936	ENSOCUG00000004071	-	83	35.238	Oryctolagus_cuniculus
ENSCING00000005248	-	90	31.918	ENSOCUG00000021448	-	62	37.029	Oryctolagus_cuniculus
ENSCING00000005248	-	90	38.393	ENSORLG00000010541	nom1	84	37.606	Oryzias_latipes
ENSCING00000005248	-	92	36.850	ENSORLG00020010789	nom1	95	36.892	Oryzias_latipes_hni
ENSCING00000005248	-	92	37.464	ENSORLG00015010475	nom1	91	37.360	Oryzias_latipes_hsok
ENSCING00000005248	-	69	40.504	ENSOMEG00000004219	nom1	86	37.500	Oryzias_melastigma
ENSCING00000005248	-	68	41.085	ENSOGAG00000001124	NOM1	83	40.971	Otolemur_garnettii
ENSCING00000005248	-	88	36.999	ENSOARG00000007261	NOM1	93	35.253	Ovis_aries
ENSCING00000005248	-	91	37.249	ENSPPAG00000041374	NOM1	61	42.135	Pan_paniscus
ENSCING00000005248	-	91	36.390	ENSPTIG00000013532	NOM1	70	40.769	Panthera_tigris_altaica
ENSCING00000005248	-	91	37.196	ENSPTRG00000019917	NOM1	61	42.135	Pan_troglodytes
ENSCING00000005248	-	69	42.557	ENSPANG00000007605	NOM1	60	42.557	Papio_anubis
ENSCING00000005248	-	92	37.717	ENSPKIG00000005825	nom1	82	37.122	Paramormyrops_kingsleyae
ENSCING00000005248	-	69	40.625	ENSPSIG00000017848	NOM1	85	40.625	Pelodiscus_sinensis
ENSCING00000005248	-	92	37.246	ENSPMGG00000002577	nom1	81	37.004	Periophthalmus_magnuspinnatus
ENSCING00000005248	-	92	36.298	ENSPEMG00000024180	Nom1	81	35.714	Peromyscus_maniculatus_bairdii
ENSCING00000005248	-	91	36.530	ENSPCIG00000027941	NOM1	80	35.771	Phascolarctos_cinereus
ENSCING00000005248	-	70	41.031	ENSPFOG00000015771	nom1	86	36.327	Poecilia_formosa
ENSCING00000005248	-	70	40.840	ENSPLAG00000007856	nom1	86	36.512	Poecilia_latipinna
ENSCING00000005248	-	93	38.429	ENSPMEG00000014155	nom1	86	36.835	Poecilia_mexicana
ENSCING00000005248	-	93	37.122	ENSPREG00000008850	nom1	84	37.955	Poecilia_reticulata
ENSCING00000005248	-	91	34.468	ENSPPYG00000018222	NOM1	82	34.724	Pongo_abelii
ENSCING00000005248	-	56	36.386	ENSPCAG00000000440	NOM1	52	36.386	Procavia_capensis
ENSCING00000005248	-	69	39.539	ENSPCOG00000015222	NOM1	97	39.539	Propithecus_coquereli
ENSCING00000005248	-	88	37.255	ENSPVAG00000014760	NOM1	80	35.961	Pteropus_vampyrus
ENSCING00000005248	-	67	42.600	ENSPNYG00000006975	nom1	89	42.626	Pundamilia_nyererei
ENSCING00000005248	-	73	40.293	ENSPNAG00000011085	nom1	80	37.255	Pygocentrus_nattereri
ENSCING00000005248	-	99	33.907	ENSRNOG00000048969	AABR07059041.1	89	33.200	Rattus_norvegicus
ENSCING00000005248	-	97	37.738	ENSRBIG00000037042	NOM1	83	37.082	Rhinopithecus_bieti
ENSCING00000005248	-	97	37.738	ENSRROG00000037293	NOM1	83	37.082	Rhinopithecus_roxellana
ENSCING00000005248	-	74	39.818	ENSSHAG00000017998	-	76	40.270	Sarcophilus_harrisii
ENSCING00000005248	-	55	35.835	ENSSHAG00000002835	-	98	36.855	Sarcophilus_harrisii
ENSCING00000005248	-	62	39.696	ENSSFOG00015003196	nom1	94	39.696	Scleropages_formosus
ENSCING00000005248	-	97	36.951	ENSSMAG00000011047	nom1	85	37.426	Scophthalmus_maximus
ENSCING00000005248	-	67	41.633	ENSSDUG00000006834	nom1	82	37.465	Seriola_dumerili
ENSCING00000005248	-	67	41.633	ENSSLDG00000021812	nom1	82	37.324	Seriola_lalandi_dorsalis
ENSCING00000005248	-	96	33.108	ENSSPUG00000002556	NOM1	95	35.577	Sphenodon_punctatus
ENSCING00000005248	-	88	36.707	ENSTGUG00000000702	-	73	40.267	Taeniopygia_guttata
ENSCING00000005248	-	72	39.813	ENSTRUG00000010239	nom1	84	35.131	Takifugu_rubripes
ENSCING00000005248	-	95	37.236	ENSTNIG00000012783	nom1	89	35.775	Tetraodon_nigroviridis
ENSCING00000005248	-	91	36.350	ENSTTRG00000009691	NOM1	83	35.399	Tursiops_truncatus
ENSCING00000005248	-	91	37.572	ENSUAMG00000025450	NOM1	59	41.635	Ursus_americanus
ENSCING00000005248	-	97	36.327	ENSUMAG00000014275	NOM1	75	41.635	Ursus_maritimus
ENSCING00000005248	-	97	36.016	ENSVVUG00000002608	NOM1	60	41.333	Vulpes_vulpes
ENSCING00000005248	-	95	35.984	ENSXETG00000021611	nom1	80	37.811	Xenopus_tropicalis
ENSCING00000005248	-	93	37.393	ENSXMAG00000002451	nom1	84	37.412	Xiphophorus_maculatus