EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005282 (Gene tree)
Gene ID: 100183873
Gene Symbol: -
Alias: -
Full Name: DDB1- and CUL4-associated factor 13
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4262 bases
Position: chr2:2629517-2633778
Accession: 100183873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010883	Sof1	PF04158.14	2.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010883	-	1666	XM_002121534	ENSCINP00000010883	447 (aa)	XP_002121570	F6UHI7

Gene Model

Click here to download ENSCING00000005282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005282	-	97	62.385	ENSG00000164934	DCAF13	100	70.833	Homo_sapiens
ENSCING00000005282	-	99	64.027	ENSAPOG00000000524	dcaf13	99	64.027	Acanthochromis_polyacanthus
ENSCING00000005282	-	99	61.991	ENSAMEG00000001595	DCAF13	98	61.991	Ailuropoda_melanoleuca
ENSCING00000005282	-	99	62.670	ENSACIG00000003110	dcaf13	98	62.670	Amphilophus_citrinellus
ENSCING00000005282	-	99	63.575	ENSAOCG00000011982	dcaf13	99	63.575	Amphiprion_ocellaris
ENSCING00000005282	-	99	56.823	ENSAPEG00000021156	dcaf13	99	56.823	Amphiprion_percula
ENSCING00000005282	-	99	63.348	ENSATEG00000024751	dcaf13	99	63.348	Anabas_testudineus
ENSCING00000005282	-	94	62.972	ENSAPLG00000002811	DCAF13	95	62.972	Anas_platyrhynchos
ENSCING00000005282	-	99	62.896	ENSACAG00000009465	DCAF13	99	62.896	Anolis_carolinensis
ENSCING00000005282	-	99	63.348	ENSANAG00000020798	DCAF13	99	63.348	Aotus_nancymaae
ENSCING00000005282	-	99	49.774	ENSANAG00000023472	-	99	50.452	Aotus_nancymaae
ENSCING00000005282	-	99	63.348	ENSACLG00000025212	dcaf13	89	63.348	Astatotilapia_calliptera
ENSCING00000005282	-	99	62.921	ENSAMXG00000037008	dcaf13	99	62.921	Astyanax_mexicanus
ENSCING00000005282	-	97	62.385	ENSBTAG00000021449	DCAF13	99	62.443	Bos_taurus
ENSCING00000005282	-	94	49.642	WBGene00022742	ZK430.7	93	49.642	Caenorhabditis_elegans
ENSCING00000005282	-	97	62.844	ENSCJAG00000016181	DCAF13	99	62.896	Callithrix_jacchus
ENSCING00000005282	-	99	63.348	ENSCAFG00000000663	DCAF13	99	63.348	Canis_familiaris
ENSCING00000005282	-	99	63.348	ENSCAFG00020003044	DCAF13	99	63.348	Canis_lupus_dingo
ENSCING00000005282	-	99	63.348	ENSCHIG00000020556	DCAF13	99	63.348	Capra_hircus
ENSCING00000005282	-	99	62.217	ENSTSYG00000003307	DCAF13	99	62.217	Carlito_syrichta
ENSCING00000005282	-	93	55.635	ENSCAPG00000007305	DCAF13	99	54.676	Cavia_aperea
ENSCING00000005282	-	99	62.443	ENSCPOG00000012291	DCAF13	99	62.443	Cavia_porcellus
ENSCING00000005282	-	99	62.670	ENSCCAG00000033103	DCAF13	76	62.670	Cebus_capucinus
ENSCING00000005282	-	99	46.606	ENSCATG00000037371	-	95	46.606	Cercocebus_atys
ENSCING00000005282	-	99	63.348	ENSCATG00000032160	DCAF13	84	63.348	Cercocebus_atys
ENSCING00000005282	-	99	62.217	ENSCLAG00000006565	DCAF13	99	62.217	Chinchilla_lanigera
ENSCING00000005282	-	99	63.348	ENSCSAG00000011887	DCAF13	99	63.348	Chlorocebus_sabaeus
ENSCING00000005282	-	70	53.165	ENSCHOG00000003007	-	73	53.165	Choloepus_hoffmanni
ENSCING00000005282	-	99	63.348	ENSCPBG00000026050	DCAF13	99	63.348	Chrysemys_picta_bellii
ENSCING00000005282	-	99	87.075	ENSCSAVG00000006538	-	99	87.075	Ciona_savignyi
ENSCING00000005282	-	99	44.898	ENSCANG00000038828	-	95	44.898	Colobus_angolensis_palliatus
ENSCING00000005282	-	99	56.561	ENSCANG00000043032	DCAF13	75	56.561	Colobus_angolensis_palliatus
ENSCING00000005282	-	99	63.801	ENSCGRG00001023256	Dcaf13	99	63.801	Cricetulus_griseus_chok1gshd
ENSCING00000005282	-	94	62.884	ENSCGRG00000004862	Dcaf13	92	62.884	Cricetulus_griseus_crigri
ENSCING00000005282	-	99	62.896	ENSCSEG00000013595	dcaf13	99	62.896	Cynoglossus_semilaevis
ENSCING00000005282	-	99	54.299	ENSCVAG00000010337	dcaf13	99	54.299	Cyprinodon_variegatus
ENSCING00000005282	-	99	61.991	ENSDARG00000002267	dcaf13	99	61.991	Danio_rerio
ENSCING00000005282	-	80	61.944	ENSDNOG00000044885	DCAF13	95	61.944	Dasypus_novemcinctus
ENSCING00000005282	-	99	61.312	ENSDORG00000011873	Dcaf13	99	61.312	Dipodomys_ordii
ENSCING00000005282	-	99	55.530	FBgn0036500	CG7275	99	55.530	Drosophila_melanogaster
ENSCING00000005282	-	99	60.586	ENSETEG00000004777	DCAF13	77	60.586	Echinops_telfairi
ENSCING00000005282	-	99	54.751	ENSEBUG00000008116	dcaf13	99	54.751	Eptatretus_burgeri
ENSCING00000005282	-	99	63.575	ENSEASG00005001266	DCAF13	99	63.575	Equus_asinus_asinus
ENSCING00000005282	-	99	63.575	ENSECAG00000009654	DCAF13	99	63.575	Equus_caballus
ENSCING00000005282	-	99	55.631	ENSEEUG00000003286	DCAF13	77	55.631	Erinaceus_europaeus
ENSCING00000005282	-	99	58.503	ENSELUG00000006191	dcaf13	99	62.899	Esox_lucius
ENSCING00000005282	-	99	63.122	ENSFCAG00000027256	DCAF13	99	63.122	Felis_catus
ENSCING00000005282	-	99	63.348	ENSFALG00000005982	DCAF13	99	63.348	Ficedula_albicollis
ENSCING00000005282	-	99	62.670	ENSFDAG00000014869	DCAF13	99	62.670	Fukomys_damarensis
ENSCING00000005282	-	99	62.443	ENSFHEG00000009965	dcaf13	99	62.443	Fundulus_heteroclitus
ENSCING00000005282	-	99	61.086	ENSGMOG00000005753	dcaf13	99	61.086	Gadus_morhua
ENSCING00000005282	-	99	64.253	ENSGALG00000034618	DCAF13	78	64.253	Gallus_gallus
ENSCING00000005282	-	93	62.919	ENSGAFG00000000368	dcaf13	88	62.919	Gambusia_affinis
ENSCING00000005282	-	99	61.991	ENSGACG00000004840	dcaf13	99	61.991	Gasterosteus_aculeatus
ENSCING00000005282	-	99	63.348	ENSGAGG00000025283	DCAF13	99	63.348	Gopherus_agassizii
ENSCING00000005282	-	92	62.228	ENSGGOG00000015124	DCAF13	79	62.291	Gorilla_gorilla
ENSCING00000005282	-	99	63.348	ENSHBUG00000015794	dcaf13	89	63.348	Haplochromis_burtoni
ENSCING00000005282	-	99	61.765	ENSHGLG00000008862	DCAF13	99	61.765	Heterocephalus_glaber_female
ENSCING00000005282	-	99	61.765	ENSHGLG00100017157	DCAF13	99	61.765	Heterocephalus_glaber_male
ENSCING00000005282	-	99	63.122	ENSHCOG00000014302	dcaf13	99	63.122	Hippocampus_comes
ENSCING00000005282	-	99	62.217	ENSIPUG00000022430	dcaf13	99	62.217	Ictalurus_punctatus
ENSCING00000005282	-	97	63.761	ENSSTOG00000008009	DCAF13	99	63.801	Ictidomys_tridecemlineatus
ENSCING00000005282	-	81	64.820	ENSJJAG00000000742	-	94	64.820	Jaculus_jaculus
ENSCING00000005282	-	99	56.920	ENSJJAG00000001990	-	99	56.920	Jaculus_jaculus
ENSCING00000005282	-	99	61.991	ENSKMAG00000002350	dcaf13	99	61.991	Kryptolebias_marmoratus
ENSCING00000005282	-	99	63.348	ENSLBEG00000002441	dcaf13	99	63.348	Labrus_bergylta
ENSCING00000005282	-	99	64.706	ENSLACG00000013358	DCAF13	99	64.706	Latimeria_chalumnae
ENSCING00000005282	-	99	63.122	ENSLOCG00000009498	dcaf13	99	63.122	Lepisosteus_oculatus
ENSCING00000005282	-	99	63.575	ENSLAFG00000009807	DCAF13	99	63.575	Loxodonta_africana
ENSCING00000005282	-	99	63.348	ENSMFAG00000008982	-	76	63.348	Macaca_fascicularis
ENSCING00000005282	-	99	61.538	ENSMFAG00000043378	-	99	61.538	Macaca_fascicularis
ENSCING00000005282	-	99	63.122	ENSMMUG00000019594	-	99	63.122	Macaca_mulatta
ENSCING00000005282	-	79	60.169	ENSMMUG00000019405	-	69	60.169	Macaca_mulatta
ENSCING00000005282	-	99	46.606	ENSMNEG00000030562	-	95	46.606	Macaca_nemestrina
ENSCING00000005282	-	99	61.538	ENSMNEG00000035898	-	99	61.538	Macaca_nemestrina
ENSCING00000005282	-	99	55.882	ENSMNEG00000033963	-	74	55.882	Macaca_nemestrina
ENSCING00000005282	-	99	63.348	ENSMLEG00000041996	DCAF13	99	63.348	Mandrillus_leucophaeus
ENSCING00000005282	-	99	48.416	ENSMLEG00000039177	-	99	48.416	Mandrillus_leucophaeus
ENSCING00000005282	-	99	63.801	ENSMAMG00000003196	dcaf13	99	63.801	Mastacembelus_armatus
ENSCING00000005282	-	99	63.348	ENSMZEG00005012249	dcaf13	89	63.348	Maylandia_zebra
ENSCING00000005282	-	94	63.723	ENSMGAG00000012340	DCAF13	98	63.723	Meleagris_gallopavo
ENSCING00000005282	-	99	53.846	ENSMAUG00000017580	Dcaf13	99	53.846	Mesocricetus_auratus
ENSCING00000005282	-	97	62.385	ENSMICG00000006907	DCAF13	99	62.443	Microcebus_murinus
ENSCING00000005282	-	99	63.348	ENSMOCG00000011609	Dcaf13	99	63.348	Microtus_ochrogaster
ENSCING00000005282	-	99	63.575	ENSMMOG00000017905	dcaf13	99	63.575	Mola_mola
ENSCING00000005282	-	99	63.801	ENSMODG00000005549	DCAF13	99	64.480	Monodelphis_domestica
ENSCING00000005282	-	99	62.108	ENSMALG00000007415	dcaf13	100	62.108	Monopterus_albus
ENSCING00000005282	-	99	64.253	MGP_CAROLIEiJ_G0019757	Dcaf13	99	64.253	Mus_caroli
ENSCING00000005282	-	99	64.706	ENSMUSG00000022300	Dcaf13	99	64.706	Mus_musculus
ENSCING00000005282	-	99	64.706	MGP_PahariEiJ_G0019766	Dcaf13	99	64.706	Mus_pahari
ENSCING00000005282	-	99	64.706	MGP_SPRETEiJ_G0020654	Dcaf13	99	64.706	Mus_spretus
ENSCING00000005282	-	90	56.188	ENSMPUG00000004976	-	98	56.188	Mustela_putorius_furo
ENSCING00000005282	-	97	63.073	ENSMLUG00000007375	DCAF13	99	63.122	Myotis_lucifugus
ENSCING00000005282	-	99	63.348	ENSNGAG00000021670	Dcaf13	99	63.348	Nannospalax_galili
ENSCING00000005282	-	99	63.348	ENSNBRG00000007078	dcaf13	99	63.348	Neolamprologus_brichardi
ENSCING00000005282	-	98	43.991	ENSNLEG00000032043	-	99	43.991	Nomascus_leucogenys
ENSCING00000005282	-	97	62.844	ENSNLEG00000003791	DCAF13	74	62.896	Nomascus_leucogenys
ENSCING00000005282	-	74	63.710	ENSMEUG00000014697	-	79	63.710	Notamacropus_eugenii
ENSCING00000005282	-	99	61.765	ENSODEG00000000870	DCAF13	99	61.765	Octodon_degus
ENSCING00000005282	-	99	63.122	ENSONIG00000000142	dcaf13	99	63.122	Oreochromis_niloticus
ENSCING00000005282	-	99	62.670	ENSOCUG00000009197	DCAF13	99	62.670	Oryctolagus_cuniculus
ENSCING00000005282	-	99	63.348	ENSORLG00000002363	dcaf13	99	63.348	Oryzias_latipes
ENSCING00000005282	-	99	63.348	ENSORLG00020001143	dcaf13	99	63.348	Oryzias_latipes_hni
ENSCING00000005282	-	99	62.896	ENSORLG00015015911	dcaf13	99	62.896	Oryzias_latipes_hsok
ENSCING00000005282	-	99	63.801	ENSOMEG00000006040	dcaf13	99	63.801	Oryzias_melastigma
ENSCING00000005282	-	97	62.385	ENSOGAG00000002277	DCAF13	99	62.443	Otolemur_garnettii
ENSCING00000005282	-	99	63.348	ENSOARG00000016227	DCAF13	99	63.348	Ovis_aries
ENSCING00000005282	-	97	62.385	ENSPPAG00000029408	DCAF13	74	62.443	Pan_paniscus
ENSCING00000005282	-	99	62.896	ENSPPRG00000005766	DCAF13	99	62.896	Panthera_pardus
ENSCING00000005282	-	99	63.122	ENSPTIG00000016790	DCAF13	99	63.122	Panthera_tigris_altaica
ENSCING00000005282	-	97	62.385	ENSPTRG00000020493	DCAF13	74	62.443	Pan_troglodytes
ENSCING00000005282	-	99	63.348	ENSPANG00000010643	-	76	63.348	Papio_anubis
ENSCING00000005282	-	99	61.312	ENSPANG00000026479	-	99	61.312	Papio_anubis
ENSCING00000005282	-	99	61.991	ENSPKIG00000017471	dcaf13	99	61.991	Paramormyrops_kingsleyae
ENSCING00000005282	-	99	61.765	ENSPSIG00000016768	DCAF13	99	61.765	Pelodiscus_sinensis
ENSCING00000005282	-	99	60.181	ENSPMGG00000022144	dcaf13	99	60.181	Periophthalmus_magnuspinnatus
ENSCING00000005282	-	99	63.801	ENSPEMG00000011958	Dcaf13	99	63.801	Peromyscus_maniculatus_bairdii
ENSCING00000005282	-	99	63.122	ENSPCIG00000026186	DCAF13	99	63.876	Phascolarctos_cinereus
ENSCING00000005282	-	99	63.122	ENSPFOG00000019444	dcaf13	99	63.122	Poecilia_formosa
ENSCING00000005282	-	99	63.122	ENSPLAG00000015924	dcaf13	99	63.122	Poecilia_latipinna
ENSCING00000005282	-	99	63.122	ENSPMEG00000004022	dcaf13	99	63.122	Poecilia_mexicana
ENSCING00000005282	-	99	63.122	ENSPREG00000016063	dcaf13	99	63.122	Poecilia_reticulata
ENSCING00000005282	-	97	62.844	ENSPPYG00000018809	-	99	62.896	Pongo_abelii
ENSCING00000005282	-	97	59.862	ENSPCAG00000007620	DCAF13	75	59.955	Procavia_capensis
ENSCING00000005282	-	96	57.870	ENSPCOG00000028064	-	99	57.991	Propithecus_coquereli
ENSCING00000005282	-	99	63.719	ENSPVAG00000017178	DCAF13	75	63.719	Pteropus_vampyrus
ENSCING00000005282	-	99	63.348	ENSPNYG00000003861	dcaf13	99	63.348	Pundamilia_nyererei
ENSCING00000005282	-	99	62.921	ENSPNAG00000010091	dcaf13	99	62.921	Pygocentrus_nattereri
ENSCING00000005282	-	99	64.253	ENSRNOG00000004301	Dcaf13	99	64.253	Rattus_norvegicus
ENSCING00000005282	-	99	63.348	ENSRBIG00000032300	DCAF13	84	63.348	Rhinopithecus_bieti
ENSCING00000005282	-	99	63.122	ENSRROG00000040442	DCAF13	99	63.122	Rhinopithecus_roxellana
ENSCING00000005282	-	97	42.890	ENSRROG00000032221	-	97	42.890	Rhinopithecus_roxellana
ENSCING00000005282	-	99	44.850	YLL011W	-	94	44.850	Saccharomyces_cerevisiae
ENSCING00000005282	-	99	63.122	ENSSBOG00000025597	DCAF13	99	63.122	Saimiri_boliviensis_boliviensis
ENSCING00000005282	-	99	62.443	ENSSHAG00000006588	DCAF13	99	63.122	Sarcophilus_harrisii
ENSCING00000005282	-	99	60.633	ENSSFOG00015006138	dcaf13	99	60.633	Scleropages_formosus
ENSCING00000005282	-	99	62.443	ENSSMAG00000009568	dcaf13	99	62.443	Scophthalmus_maximus
ENSCING00000005282	-	99	62.670	ENSSLDG00000010517	dcaf13	99	62.670	Seriola_lalandi_dorsalis
ENSCING00000005282	-	99	63.122	ENSSPUG00000009148	DCAF13	99	63.122	Sphenodon_punctatus
ENSCING00000005282	-	99	63.575	ENSSPAG00000019890	dcaf13	99	63.575	Stegastes_partitus
ENSCING00000005282	-	99	61.765	ENSSSCG00000006048	DCAF13	99	61.765	Sus_scrofa
ENSCING00000005282	-	94	63.246	ENSTGUG00000012152	DCAF13	99	63.246	Taeniopygia_guttata
ENSCING00000005282	-	99	62.443	ENSTRUG00000007438	dcaf13	99	62.443	Takifugu_rubripes
ENSCING00000005282	-	94	62.381	ENSTNIG00000008215	dcaf13	85	62.381	Tetraodon_nigroviridis
ENSCING00000005282	-	97	53.670	ENSTTRG00000014906	DCAF13	74	53.620	Tursiops_truncatus
ENSCING00000005282	-	99	62.896	ENSUAMG00000017931	DCAF13	99	62.896	Ursus_americanus
ENSCING00000005282	-	98	57.727	ENSUMAG00000019830	DCAF13	75	57.727	Ursus_maritimus
ENSCING00000005282	-	99	63.122	ENSVPAG00000006725	DCAF13	75	63.122	Vicugna_pacos
ENSCING00000005282	-	93	63.636	ENSVVUG00000016884	DCAF13	89	63.636	Vulpes_vulpes
ENSCING00000005282	-	81	64.463	ENSXETG00000004092	dcaf13	99	64.463	Xenopus_tropicalis
ENSCING00000005282	-	99	59.276	ENSXCOG00000017005	dcaf13	99	59.276	Xiphophorus_couchianus
ENSCING00000005282	-	99	62.896	ENSXMAG00000026809	dcaf13	99	62.896	Xiphophorus_maculatus