EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005289 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6399 bases
Position: chr4:5239810-5246208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024617	zf-C2H2	PF00096.26	3e-29	1	5
ENSCINP00000024617	zf-C2H2	PF00096.26	3e-29	2	5
ENSCINP00000024617	zf-C2H2	PF00096.26	3e-29	3	5
ENSCINP00000024617	zf-C2H2	PF00096.26	3e-29	4	5
ENSCINP00000024617	zf-C2H2	PF00096.26	3e-29	5	5
ENSCINP00000024617	zf-met	PF12874.7	4.6e-21	1	5
ENSCINP00000024617	zf-met	PF12874.7	4.6e-21	2	5
ENSCINP00000024617	zf-met	PF12874.7	4.6e-21	3	5
ENSCINP00000024617	zf-met	PF12874.7	4.6e-21	4	5
ENSCINP00000024617	zf-met	PF12874.7	4.6e-21	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024863	-	3192	-	ENSCINP00000024617	905 (aa)	-	F6VRW9

Gene Model

Click here to download ENSCING00000005289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005289	-	52	60.800	ENSCING00000003802	-	54	57.407	Ciona_intestinalis
ENSCING00000005289	-	97	72.982	ENSCSAVG00000009421	-	94	72.982	Ciona_savignyi
ENSCING00000005289	-	54	56.897	ENSCSAVG00000010662	-	51	56.897	Ciona_savignyi