EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005342 (Gene tree)
Gene ID: 100179444
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3036 bases
Position: chrHT000025.1:63257-66292
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000010977	Xpo1	PF08389.12	8.2e-06	1	1
ENSCINP00000010977	IBN_N	PF03810.19	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000010977	-	3036	-	ENSCINP00000010977	1011 (aa)	-	F7B5A5

Gene Model

Click here to download ENSCING00000005342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005342	-	99	48.340	ENSG00000198700	IPO9	98	48.535	Homo_sapiens
ENSCING00000005342	-	99	46.905	ENSAPOG00000020880	ipo9	98	47.246	Acanthochromis_polyacanthus
ENSCING00000005342	-	99	48.152	ENSAMEG00000012052	IPO9	98	48.206	Ailuropoda_melanoleuca
ENSCING00000005342	-	87	49.831	ENSACIG00000015855	ipo9	96	49.831	Amphilophus_citrinellus
ENSCING00000005342	-	99	47.716	ENSAOCG00000000358	ipo9	98	48.058	Amphiprion_ocellaris
ENSCING00000005342	-	99	47.619	ENSAPEG00000009684	ipo9	97	49.719	Amphiprion_percula
ENSCING00000005342	-	87	49.548	ENSATEG00000025038	ipo9	97	49.719	Anabas_testudineus
ENSCING00000005342	-	97	48.736	ENSAPLG00000008676	IPO9	99	48.938	Anas_platyrhynchos
ENSCING00000005342	-	97	48.537	ENSACAG00000005261	IPO9	99	48.790	Anolis_carolinensis
ENSCING00000005342	-	99	48.340	ENSANAG00000032001	IPO9	98	48.438	Aotus_nancymaae
ENSCING00000005342	-	99	47.898	ENSACLG00000019807	ipo9	98	47.898	Astatotilapia_calliptera
ENSCING00000005342	-	99	47.839	ENSAMXG00000024731	ipo9	98	47.839	Astyanax_mexicanus
ENSCING00000005342	-	99	47.754	ENSBTAG00000004452	IPO9	98	48.242	Bos_taurus
ENSCING00000005342	-	99	48.340	ENSCJAG00000005627	IPO9	98	48.535	Callithrix_jacchus
ENSCING00000005342	-	97	48.290	ENSCAFG00000010649	IPO9	99	48.491	Canis_familiaris
ENSCING00000005342	-	99	47.868	ENSCAFG00020016229	IPO9	98	48.062	Canis_lupus_dingo
ENSCING00000005342	-	99	47.852	ENSCHIG00000015356	IPO9	98	48.340	Capra_hircus
ENSCING00000005342	-	99	48.145	ENSTSYG00000009534	IPO9	98	48.340	Carlito_syrichta
ENSCING00000005342	-	99	47.436	ENSCPOG00000000762	IPO9	97	47.535	Cavia_porcellus
ENSCING00000005342	-	99	48.340	ENSCCAG00000021455	IPO9	98	48.535	Cebus_capucinus
ENSCING00000005342	-	99	48.340	ENSCATG00000045312	IPO9	98	48.535	Cercocebus_atys
ENSCING00000005342	-	99	48.242	ENSCLAG00000015074	IPO9	98	48.340	Chinchilla_lanigera
ENSCING00000005342	-	99	48.340	ENSCSAG00000014031	IPO9	98	48.535	Chlorocebus_sabaeus
ENSCING00000005342	-	77	49.809	ENSCHOG00000013225	IPO9	75	49.809	Choloepus_hoffmanni
ENSCING00000005342	-	99	48.434	ENSCPBG00000018755	IPO9	94	48.532	Chrysemys_picta_bellii
ENSCING00000005342	-	100	80.119	ENSCSAVG00000011013	-	98	80.119	Ciona_savignyi
ENSCING00000005342	-	94	60.396	ENSCANG00000031120	IPO9	98	60.396	Colobus_angolensis_palliatus
ENSCING00000005342	-	99	48.438	ENSCGRG00001019976	Ipo9	98	48.535	Cricetulus_griseus_chok1gshd
ENSCING00000005342	-	99	47.965	ENSCGRG00000013271	Ipo9	98	48.062	Cricetulus_griseus_crigri
ENSCING00000005342	-	99	48.094	ENSCSEG00000018787	ipo9	98	48.583	Cynoglossus_semilaevis
ENSCING00000005342	-	99	48.444	ENSCVAG00000008811	ipo9	98	48.735	Cyprinodon_variegatus
ENSCING00000005342	-	99	47.517	ENSDARG00000016753	ipo9	98	47.860	Danio_rerio
ENSCING00000005342	-	99	48.340	ENSDNOG00000004002	IPO9	98	48.340	Dasypus_novemcinctus
ENSCING00000005342	-	99	33.790	FBgn0037894	Ranbp9	98	33.497	Drosophila_melanogaster
ENSCING00000005342	-	99	44.195	ENSETEG00000003133	IPO9	98	44.195	Echinops_telfairi
ENSCING00000005342	-	69	48.355	ENSEBUG00000005745	ipo9	86	48.355	Eptatretus_burgeri
ENSCING00000005342	-	99	48.633	ENSEASG00005019908	IPO9	98	48.828	Equus_asinus_asinus
ENSCING00000005342	-	99	48.828	ENSECAG00000024368	IPO9	98	48.783	Equus_caballus
ENSCING00000005342	-	87	50.281	ENSELUG00000022202	ipo9	97	50.281	Esox_lucius
ENSCING00000005342	-	99	48.340	ENSFCAG00000000444	IPO9	98	48.393	Felis_catus
ENSCING00000005342	-	99	48.094	ENSFALG00000002610	IPO9	98	48.289	Ficedula_albicollis
ENSCING00000005342	-	99	48.242	ENSFDAG00000019466	IPO9	98	48.438	Fukomys_damarensis
ENSCING00000005342	-	99	47.957	ENSFHEG00000016546	ipo9	98	48.299	Fundulus_heteroclitus
ENSCING00000005342	-	99	47.435	ENSGMOG00000007883	ipo9	98	47.864	Gadus_morhua
ENSCING00000005342	-	99	48.728	ENSGALG00000000397	IPO9	98	48.924	Gallus_gallus
ENSCING00000005342	-	99	47.860	ENSGAFG00000014070	ipo9	98	48.249	Gambusia_affinis
ENSCING00000005342	-	99	47.619	ENSGACG00000006233	ipo9	98	48.105	Gasterosteus_aculeatus
ENSCING00000005342	-	96	49.391	ENSGAGG00000017238	IPO9	96	50.209	Gopherus_agassizii
ENSCING00000005342	-	99	48.340	ENSGGOG00000006787	IPO9	98	48.535	Gorilla_gorilla
ENSCING00000005342	-	87	49.719	ENSHBUG00000008849	ipo9	97	49.719	Haplochromis_burtoni
ENSCING00000005342	-	99	48.242	ENSHGLG00000011536	IPO9	98	48.438	Heterocephalus_glaber_female
ENSCING00000005342	-	99	48.242	ENSHGLG00100016613	IPO9	98	48.438	Heterocephalus_glaber_male
ENSCING00000005342	-	99	48.441	ENSIPUG00000014896	Ipo9	98	49.027	Ictalurus_punctatus
ENSCING00000005342	-	99	48.438	ENSSTOG00000009786	IPO9	98	48.438	Ictidomys_tridecemlineatus
ENSCING00000005342	-	99	48.242	ENSJJAG00000012560	Ipo9	98	48.438	Jaculus_jaculus
ENSCING00000005342	-	99	46.356	ENSKMAG00000013352	ipo9	98	46.796	Kryptolebias_marmoratus
ENSCING00000005342	-	99	47.911	ENSLBEG00000012471	ipo9	98	48.350	Labrus_bergylta
ENSCING00000005342	-	99	48.976	ENSLACG00000012842	IPO9	97	49.414	Latimeria_chalumnae
ENSCING00000005342	-	99	47.805	ENSLOCG00000010108	ipo9	98	48.148	Lepisosteus_oculatus
ENSCING00000005342	-	99	48.425	ENSLAFG00000012565	IPO9	98	48.425	Loxodonta_africana
ENSCING00000005342	-	99	48.340	ENSMFAG00000035917	IPO9	98	48.535	Macaca_fascicularis
ENSCING00000005342	-	99	47.868	ENSMMUG00000001916	IPO9	98	48.062	Macaca_mulatta
ENSCING00000005342	-	99	48.340	ENSMNEG00000043396	IPO9	98	48.535	Macaca_nemestrina
ENSCING00000005342	-	99	47.868	ENSMLEG00000030171	IPO9	98	48.062	Mandrillus_leucophaeus
ENSCING00000005342	-	87	49.606	ENSMAMG00000008798	ipo9	96	49.606	Mastacembelus_armatus
ENSCING00000005342	-	99	47.898	ENSMZEG00005005610	ipo9	98	47.898	Maylandia_zebra
ENSCING00000005342	-	97	48.394	ENSMGAG00000001445	IPO9	99	48.695	Meleagris_gallopavo
ENSCING00000005342	-	99	47.953	ENSMAUG00000020318	Ipo9	98	48.051	Mesocricetus_auratus
ENSCING00000005342	-	99	48.242	ENSMICG00000009250	IPO9	98	48.438	Microcebus_murinus
ENSCING00000005342	-	99	48.145	ENSMOCG00000022988	Ipo9	98	48.340	Microtus_ochrogaster
ENSCING00000005342	-	87	49.275	ENSMMOG00000006199	ipo9	97	49.275	Mola_mola
ENSCING00000005342	-	99	48.826	ENSMODG00000000485	IPO9	98	49.022	Monodelphis_domestica
ENSCING00000005342	-	99	46.320	ENSMALG00000010742	ipo9	98	46.169	Monopterus_albus
ENSCING00000005342	-	99	45.898	MGP_CAROLIEiJ_G0014639	Ipo9	98	46.094	Mus_caroli
ENSCING00000005342	-	99	48.387	ENSMUSG00000041879	Ipo9	98	48.583	Mus_musculus
ENSCING00000005342	-	99	48.340	MGP_PahariEiJ_G0027875	Ipo9	98	48.535	Mus_pahari
ENSCING00000005342	-	99	48.438	MGP_SPRETEiJ_G0015446	Ipo9	98	48.535	Mus_spretus
ENSCING00000005342	-	99	48.340	ENSMPUG00000010874	IPO9	92	48.393	Mustela_putorius_furo
ENSCING00000005342	-	86	49.658	ENSMLUG00000006640	IPO9	97	48.759	Myotis_lucifugus
ENSCING00000005342	-	99	48.145	ENSNGAG00000014956	Ipo9	98	48.340	Nannospalax_galili
ENSCING00000005342	-	59	54.476	ENSNBRG00000005251	ipo9	87	54.476	Neolamprologus_brichardi
ENSCING00000005342	-	99	48.340	ENSNLEG00000018086	IPO9	98	48.535	Nomascus_leucogenys
ENSCING00000005342	-	76	58.586	ENSMEUG00000007152	IPO9	84	57.921	Notamacropus_eugenii
ENSCING00000005342	-	99	48.145	ENSODEG00000011377	IPO9	98	48.438	Octodon_degus
ENSCING00000005342	-	99	47.822	ENSONIG00000011495	ipo9	98	48.696	Oreochromis_niloticus
ENSCING00000005342	-	97	48.133	ENSOANG00000009358	IPO9	99	48.133	Ornithorhynchus_anatinus
ENSCING00000005342	-	99	48.438	ENSOCUG00000007477	IPO9	89	48.633	Oryctolagus_cuniculus
ENSCING00000005342	-	99	47.276	ENSORLG00000005758	ipo9	98	47.665	Oryzias_latipes
ENSCING00000005342	-	99	47.276	ENSORLG00020016512	ipo9	98	47.665	Oryzias_latipes_hni
ENSCING00000005342	-	99	47.276	ENSORLG00015012256	ipo9	98	47.665	Oryzias_latipes_hsok
ENSCING00000005342	-	99	47.522	ENSOMEG00000017601	ipo9	98	47.911	Oryzias_melastigma
ENSCING00000005342	-	99	48.438	ENSOGAG00000006162	IPO9	98	48.633	Otolemur_garnettii
ENSCING00000005342	-	97	47.480	ENSOARG00000019086	IPO9	99	47.782	Ovis_aries
ENSCING00000005342	-	99	48.340	ENSPPAG00000037356	IPO9	98	48.535	Pan_paniscus
ENSCING00000005342	-	99	48.340	ENSPPRG00000005675	IPO9	98	48.393	Panthera_pardus
ENSCING00000005342	-	99	48.617	ENSPTIG00000009708	IPO9	99	48.670	Panthera_tigris_altaica
ENSCING00000005342	-	99	48.340	ENSPTRG00000023652	IPO9	98	48.535	Pan_troglodytes
ENSCING00000005342	-	99	47.628	ENSPANG00000026214	IPO9	98	47.822	Papio_anubis
ENSCING00000005342	-	99	48.406	ENSPKIG00000017281	ipo9	98	48.599	Paramormyrops_kingsleyae
ENSCING00000005342	-	87	50.000	ENSPMGG00000008544	ipo9	97	50.000	Periophthalmus_magnuspinnatus
ENSCING00000005342	-	99	48.242	ENSPEMG00000017658	Ipo9	98	48.438	Peromyscus_maniculatus_bairdii
ENSCING00000005342	-	99	48.826	ENSPCIG00000030448	IPO9	98	49.119	Phascolarctos_cinereus
ENSCING00000005342	-	99	47.868	ENSPFOG00000004346	ipo9	98	48.152	Poecilia_formosa
ENSCING00000005342	-	99	47.868	ENSPLAG00000012867	ipo9	98	48.152	Poecilia_latipinna
ENSCING00000005342	-	99	47.053	ENSPMEG00000021436	ipo9	98	47.446	Poecilia_mexicana
ENSCING00000005342	-	99	47.271	ENSPREG00000008970	ipo9	98	47.563	Poecilia_reticulata
ENSCING00000005342	-	99	47.670	ENSPCOG00000014001	IPO9	98	47.864	Propithecus_coquereli
ENSCING00000005342	-	87	49.831	ENSPNYG00000013180	ipo9	97	49.831	Pundamilia_nyererei
ENSCING00000005342	-	99	47.642	ENSPNAG00000015428	ipo9	98	47.839	Pygocentrus_nattereri
ENSCING00000005342	-	99	48.340	ENSRNOG00000007418	Ipo9	98	48.535	Rattus_norvegicus
ENSCING00000005342	-	99	48.340	ENSRBIG00000038277	IPO9	98	48.535	Rhinopithecus_bieti
ENSCING00000005342	-	99	48.340	ENSRROG00000045165	IPO9	98	48.535	Rhinopithecus_roxellana
ENSCING00000005342	-	99	47.363	ENSSBOG00000023990	IPO9	98	47.559	Saimiri_boliviensis_boliviensis
ENSCING00000005342	-	97	48.741	ENSSHAG00000010437	IPO9	98	48.043	Sarcophilus_harrisii
ENSCING00000005342	-	99	47.358	ENSSFOG00015018530	ipo9	98	47.179	Scleropages_formosus
ENSCING00000005342	-	97	47.700	ENSSMAG00000011675	ipo9	99	48.152	Scophthalmus_maximus
ENSCING00000005342	-	99	47.716	ENSSDUG00000019692	ipo9	98	48.058	Seriola_dumerili
ENSCING00000005342	-	99	47.670	ENSSLDG00000017170	ipo9	98	47.915	Seriola_lalandi_dorsalis
ENSCING00000005342	-	65	45.358	ENSSARG00000005420	IPO9	67	45.358	Sorex_araneus
ENSCING00000005342	-	99	47.328	ENSSPUG00000012890	IPO9	98	47.914	Sphenodon_punctatus
ENSCING00000005342	-	99	47.522	ENSSPAG00000015136	ipo9	98	47.716	Stegastes_partitus
ENSCING00000005342	-	99	48.387	ENSSSCG00000039843	IPO9	97	50.281	Sus_scrofa
ENSCING00000005342	-	99	47.661	ENSTRUG00000012941	ipo9	96	48.148	Takifugu_rubripes
ENSCING00000005342	-	99	47.864	ENSTNIG00000007044	ipo9	98	48.447	Tetraodon_nigroviridis
ENSCING00000005342	-	99	44.824	ENSTBEG00000010254	IPO9	98	45.020	Tupaia_belangeri
ENSCING00000005342	-	98	46.400	ENSTTRG00000005969	IPO9	99	46.261	Tursiops_truncatus
ENSCING00000005342	-	99	47.868	ENSUMAG00000003122	IPO9	99	47.741	Ursus_maritimus
ENSCING00000005342	-	98	48.008	ENSVVUG00000006283	IPO9	99	48.540	Vulpes_vulpes
ENSCING00000005342	-	99	48.441	ENSXETG00000007974	ipo9	98	48.733	Xenopus_tropicalis
ENSCING00000005342	-	99	46.955	ENSXCOG00000013891	ipo9	98	47.348	Xiphophorus_couchianus
ENSCING00000005342	-	99	47.860	ENSXMAG00000006013	ipo9	98	48.249	Xiphophorus_maculatus