EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005409 (Gene tree)
Gene ID: 100178018
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3080 bases
Position: chrHT000184.1:187377-190456
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011127	MMR_HSR1	PF01926.23	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011127	-	1067	-	ENSCINP00000011127	225 (aa)	-	F6Z9S5

Gene Model

Click here to download ENSCING00000005409's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005409	-	75	48.810	WBGene00004275	rab-11.2	84	48.810	Caenorhabditis_elegans
ENSCING00000005409	-	99	77.533	ENSCSAVG00000005120	-	95	77.533	Ciona_savignyi
ENSCING00000005409	-	85	48.691	YER031C	YPT31	86	48.691	Saccharomyces_cerevisiae
ENSCING00000005409	-	75	53.571	YGL210W	-	76	53.571	Saccharomyces_cerevisiae