EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005471 (Gene tree)
Gene ID: 100183412
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 10961 bases
Position: chr10:3305292-3316252
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011291	eIF-5_eIF-2B	PF01873.17	4.2e-39	1	1
ENSCINP00000011291	W2	PF02020.18	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011291	-	1679	-	ENSCINP00000011291	426 (aa)	-	F6U602

Gene Model

Click here to download ENSCING00000005471's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005471	-	89	53.264	ENSG00000100664	EIF5	98	79.798	Homo_sapiens
ENSCING00000005471	-	88	56.085	ENSAPOG00000004515	eif5	87	56.364	Acanthochromis_polyacanthus
ENSCING00000005471	-	89	54.712	ENSAMEG00000018173	EIF5	88	54.404	Ailuropoda_melanoleuca
ENSCING00000005471	-	88	56.085	ENSACIG00000023833	eif5	87	56.364	Amphilophus_citrinellus
ENSCING00000005471	-	88	56.085	ENSAOCG00000023121	eif5	87	56.364	Amphiprion_ocellaris
ENSCING00000005471	-	88	56.085	ENSAPEG00000003714	eif5	87	56.364	Amphiprion_percula
ENSCING00000005471	-	88	56.349	ENSATEG00000017486	eif5	87	56.623	Anabas_testudineus
ENSCING00000005471	-	88	54.354	ENSAPLG00000015675	-	88	54.145	Anas_platyrhynchos
ENSCING00000005471	-	88	54.737	ENSACAG00000000485	EIF5	88	55.440	Anolis_carolinensis
ENSCING00000005471	-	89	51.444	ENSANAG00000018076	-	88	51.554	Aotus_nancymaae
ENSCING00000005471	-	70	34.314	ENSANAG00000026111	-	76	39.726	Aotus_nancymaae
ENSCING00000005471	-	88	55.026	ENSACLG00000011164	eif5	87	54.124	Astatotilapia_calliptera
ENSCING00000005471	-	99	52.204	ENSAMXG00000019210	eif5	87	55.614	Astyanax_mexicanus
ENSCING00000005471	-	90	55.699	ENSAMXG00000001895	EIF5	96	57.143	Astyanax_mexicanus
ENSCING00000005471	-	88	55.145	ENSBTAG00000016282	EIF5	88	55.145	Bos_taurus
ENSCING00000005471	-	88	46.719	WBGene00016496	C37C3.2	84	47.368	Caenorhabditis_elegans
ENSCING00000005471	-	88	54.474	ENSCJAG00000017104	EIF5	88	54.474	Callithrix_jacchus
ENSCING00000005471	-	89	54.712	ENSCAFG00000018213	EIF5	88	54.404	Canis_familiaris
ENSCING00000005471	-	89	54.712	ENSCAFG00020008755	EIF5	88	54.404	Canis_lupus_dingo
ENSCING00000005471	-	88	54.737	ENSCHIG00000021283	EIF5	88	54.737	Capra_hircus
ENSCING00000005471	-	89	54.712	ENSTSYG00000008951	EIF5	88	54.404	Carlito_syrichta
ENSCING00000005471	-	91	35.550	ENSCAPG00000010304	-	85	50.000	Cavia_aperea
ENSCING00000005471	-	88	54.737	ENSCPOG00000001236	-	88	54.922	Cavia_porcellus
ENSCING00000005471	-	89	55.556	ENSCPOG00000022536	-	86	38.903	Cavia_porcellus
ENSCING00000005471	-	89	42.105	ENSCCAG00000033591	-	85	50.000	Cebus_capucinus
ENSCING00000005471	-	89	54.712	ENSCCAG00000018461	EIF5	88	54.404	Cebus_capucinus
ENSCING00000005471	-	89	54.167	ENSCATG00000044001	EIF5	88	54.404	Cercocebus_atys
ENSCING00000005471	-	88	54.737	ENSCLAG00000006631	-	88	54.922	Chinchilla_lanigera
ENSCING00000005471	-	89	48.421	ENSCLAG00000001983	-	90	47.927	Chinchilla_lanigera
ENSCING00000005471	-	92	43.038	ENSCSAG00000015314	-	88	42.246	Chlorocebus_sabaeus
ENSCING00000005471	-	89	53.003	ENSCSAG00000010080	EIF5	88	54.922	Chlorocebus_sabaeus
ENSCING00000005471	-	94	41.481	ENSCHOG00000002851	EIF5	88	41.534	Choloepus_hoffmanni
ENSCING00000005471	-	88	54.762	ENSCPBG00000020321	EIF5	88	55.469	Chrysemys_picta_bellii
ENSCING00000005471	-	97	88.889	ENSCSAVG00000008729	-	97	89.737	Ciona_savignyi
ENSCING00000005471	-	89	53.003	ENSCANG00000030330	EIF5	88	54.922	Colobus_angolensis_palliatus
ENSCING00000005471	-	82	43.503	ENSCANG00000031882	-	94	43.503	Colobus_angolensis_palliatus
ENSCING00000005471	-	89	48.556	ENSCGRG00001005805	-	88	48.831	Cricetulus_griseus_chok1gshd
ENSCING00000005471	-	91	39.500	ENSCGRG00001010509	-	86	40.054	Cricetulus_griseus_chok1gshd
ENSCING00000005471	-	89	55.236	ENSCGRG00001023334	-	88	55.000	Cricetulus_griseus_chok1gshd
ENSCING00000005471	-	89	54.974	ENSCGRG00000016658	-	88	54.404	Cricetulus_griseus_crigri
ENSCING00000005471	-	81	47.414	ENSCGRG00000002718	-	84	47.727	Cricetulus_griseus_crigri
ENSCING00000005471	-	99	45.946	ENSCSEG00000013347	eif5	87	56.728	Cynoglossus_semilaevis
ENSCING00000005471	-	88	56.349	ENSCVAG00000019134	eif5	87	56.959	Cyprinodon_variegatus
ENSCING00000005471	-	90	57.031	ENSDARG00000003681	eif5	98	78.505	Danio_rerio
ENSCING00000005471	-	58	40.711	ENSDNOG00000038945	-	84	40.711	Dasypus_novemcinctus
ENSCING00000005471	-	89	51.554	ENSDNOG00000032674	EIF5	88	51.282	Dasypus_novemcinctus
ENSCING00000005471	-	88	49.476	ENSDNOG00000038256	-	88	49.608	Dasypus_novemcinctus
ENSCING00000005471	-	89	54.974	ENSDORG00000023754	Eif5	88	54.663	Dipodomys_ordii
ENSCING00000005471	-	89	47.059	FBgn0030719	eIF5	88	46.437	Drosophila_melanogaster
ENSCING00000005471	-	89	55.118	ENSETEG00000015220	EIF5	88	54.663	Echinops_telfairi
ENSCING00000005471	-	88	54.805	ENSEBUG00000004298	eif5	87	54.830	Eptatretus_burgeri
ENSCING00000005471	-	88	54.737	ENSEASG00005004086	EIF5	88	54.663	Equus_asinus_asinus
ENSCING00000005471	-	88	54.737	ENSECAG00000012597	EIF5	88	54.663	Equus_caballus
ENSCING00000005471	-	99	53.023	ENSELUG00000013021	EIF5	88	55.065	Esox_lucius
ENSCING00000005471	-	89	53.927	ENSELUG00000017892	eif5	87	55.614	Esox_lucius
ENSCING00000005471	-	89	54.974	ENSFCAG00000026424	EIF5	89	54.663	Felis_catus
ENSCING00000005471	-	88	54.617	ENSFALG00000002816	EIF5	88	54.404	Ficedula_albicollis
ENSCING00000005471	-	89	54.974	ENSFDAG00000007742	-	88	54.663	Fukomys_damarensis
ENSCING00000005471	-	91	38.107	ENSFDAG00000004788	-	86	38.542	Fukomys_damarensis
ENSCING00000005471	-	88	56.349	ENSFHEG00000010524	eif5	87	56.959	Fundulus_heteroclitus
ENSCING00000005471	-	89	54.474	ENSGMOG00000010039	eif5	87	54.233	Gadus_morhua
ENSCING00000005471	-	88	54.354	ENSGALG00000011464	EIF5	88	54.145	Gallus_gallus
ENSCING00000005471	-	88	56.085	ENSGAFG00000011921	eif5	87	56.959	Gambusia_affinis
ENSCING00000005471	-	88	55.820	ENSGACG00000004730	eif5	87	55.814	Gasterosteus_aculeatus
ENSCING00000005471	-	88	54.497	ENSGAGG00000010329	EIF5	88	54.497	Gopherus_agassizii
ENSCING00000005471	-	86	41.463	ENSGGOG00000007843	-	89	42.588	Gorilla_gorilla
ENSCING00000005471	-	89	53.264	ENSGGOG00000040461	EIF5	92	54.663	Gorilla_gorilla
ENSCING00000005471	-	88	55.820	ENSHBUG00000001036	eif5	87	55.844	Haplochromis_burtoni
ENSCING00000005471	-	88	50.660	ENSHGLG00000002673	-	91	49.471	Heterocephalus_glaber_female
ENSCING00000005471	-	89	48.429	ENSHGLG00000002654	-	90	48.969	Heterocephalus_glaber_female
ENSCING00000005471	-	90	44.041	ENSHGLG00000000151	-	89	43.386	Heterocephalus_glaber_female
ENSCING00000005471	-	88	43.117	ENSHGLG00000014807	-	89	43.915	Heterocephalus_glaber_female
ENSCING00000005471	-	89	54.712	ENSHGLG00000015043	-	88	54.404	Heterocephalus_glaber_female
ENSCING00000005471	-	89	52.356	ENSHGLG00100009517	-	88	52.332	Heterocephalus_glaber_male
ENSCING00000005471	-	88	44.041	ENSHGLG00100009455	-	89	44.855	Heterocephalus_glaber_male
ENSCING00000005471	-	87	49.598	ENSHGLG00100001508	-	94	48.525	Heterocephalus_glaber_male
ENSCING00000005471	-	88	50.000	ENSHGLG00100001816	-	90	50.000	Heterocephalus_glaber_male
ENSCING00000005471	-	89	48.429	ENSHGLG00100017309	-	90	48.969	Heterocephalus_glaber_male
ENSCING00000005471	-	72	45.217	ENSHGLG00100002065	-	81	45.217	Heterocephalus_glaber_male
ENSCING00000005471	-	90	55.990	ENSHCOG00000000904	eif5	80	66.279	Hippocampus_comes
ENSCING00000005471	-	88	54.881	ENSIPUG00000015961	EIF5	87	55.352	Ictalurus_punctatus
ENSCING00000005471	-	88	57.368	ENSIPUG00000003331	eif5	88	57.292	Ictalurus_punctatus
ENSCING00000005471	-	89	55.236	ENSSTOG00000003683	EIF5	88	54.922	Ictidomys_tridecemlineatus
ENSCING00000005471	-	75	70.588	ENSJJAG00000011403	Eif5	86	73.288	Jaculus_jaculus
ENSCING00000005471	-	88	54.937	ENSKMAG00000017862	eif5	87	56.728	Kryptolebias_marmoratus
ENSCING00000005471	-	88	55.172	ENSLBEG00000005184	eif5	87	55.440	Labrus_bergylta
ENSCING00000005471	-	88	55.556	ENSLACG00000012744	EIF5	88	55.789	Latimeria_chalumnae
ENSCING00000005471	-	88	58.047	ENSLOCG00000009881	eif5	87	58.247	Lepisosteus_oculatus
ENSCING00000005471	-	89	54.974	ENSLAFG00000017777	-	88	54.663	Loxodonta_africana
ENSCING00000005471	-	88	52.646	ENSLAFG00000026935	-	88	52.105	Loxodonta_africana
ENSCING00000005471	-	89	53.003	ENSMFAG00000033053	EIF5	88	54.922	Macaca_fascicularis
ENSCING00000005471	-	92	37.975	ENSMMUG00000012796	-	88	38.544	Macaca_mulatta
ENSCING00000005471	-	89	53.003	ENSMMUG00000005630	EIF5	88	54.922	Macaca_mulatta
ENSCING00000005471	-	92	40.759	ENSMNEG00000043034	-	88	41.509	Macaca_nemestrina
ENSCING00000005471	-	89	53.003	ENSMNEG00000039342	EIF5	88	54.922	Macaca_nemestrina
ENSCING00000005471	-	89	54.167	ENSMLEG00000035191	EIF5	88	54.404	Mandrillus_leucophaeus
ENSCING00000005471	-	88	56.085	ENSMAMG00000000066	eif5	87	56.364	Mastacembelus_armatus
ENSCING00000005471	-	88	62.353	ENSMZEG00005002102	eif5	87	55.844	Maylandia_zebra
ENSCING00000005471	-	88	54.474	ENSMGAG00000013398	EIF5	88	54.005	Meleagris_gallopavo
ENSCING00000005471	-	89	55.236	ENSMAUG00000001058	Eif5	88	54.922	Mesocricetus_auratus
ENSCING00000005471	-	89	55.118	ENSMICG00000010046	EIF5	88	54.881	Microcebus_murinus
ENSCING00000005471	-	89	48.158	ENSMOCG00000001905	-	87	47.884	Microtus_ochrogaster
ENSCING00000005471	-	89	54.974	ENSMOCG00000021790	-	88	54.663	Microtus_ochrogaster
ENSCING00000005471	-	88	56.614	ENSMMOG00000014762	eif5	87	56.623	Mola_mola
ENSCING00000005471	-	89	54.974	ENSMODG00000013424	EIF5	88	54.922	Monodelphis_domestica
ENSCING00000005471	-	88	54.430	ENSMALG00000021591	eif5	88	54.937	Monopterus_albus
ENSCING00000005471	-	89	55.118	ENSMUSG00000021282	Eif5	99	73.611	Mus_musculus
ENSCING00000005471	-	89	54.974	ENSMPUG00000002368	EIF5	88	54.663	Mustela_putorius_furo
ENSCING00000005471	-	89	55.352	ENSMLUG00000000882	-	88	55.181	Myotis_lucifugus
ENSCING00000005471	-	89	55.236	ENSNGAG00000023359	-	88	54.922	Nannospalax_galili
ENSCING00000005471	-	84	41.061	ENSNGAG00000024182	-	86	41.209	Nannospalax_galili
ENSCING00000005471	-	83	42.308	ENSNGAG00000023113	-	88	36.031	Nannospalax_galili
ENSCING00000005471	-	88	55.820	ENSNBRG00000023720	eif5	87	55.844	Neolamprologus_brichardi
ENSCING00000005471	-	89	53.003	ENSNLEG00000027211	EIF5	88	54.663	Nomascus_leucogenys
ENSCING00000005471	-	64	73.103	ENSMEUG00000003217	EIF5	72	64.407	Notamacropus_eugenii
ENSCING00000005471	-	83	53.352	ENSOPRG00000017186	-	88	54.017	Ochotona_princeps
ENSCING00000005471	-	88	53.439	ENSODEG00000002043	-	94	54.545	Octodon_degus
ENSCING00000005471	-	88	41.753	ENSODEG00000004696	-	86	42.328	Octodon_degus
ENSCING00000005471	-	89	37.632	ENSODEG00000004370	-	85	37.731	Octodon_degus
ENSCING00000005471	-	88	44.474	ENSODEG00000005520	-	90	44.474	Octodon_degus
ENSCING00000005471	-	88	48.421	ENSODEG00000001578	-	88	48.684	Octodon_degus
ENSCING00000005471	-	89	40.789	ENSODEG00000006142	-	85	40.260	Octodon_degus
ENSCING00000005471	-	88	55.820	ENSONIG00000012407	eif5	87	56.072	Oreochromis_niloticus
ENSCING00000005471	-	97	53.095	ENSOANG00000000767	EIF5	86	54.324	Ornithorhynchus_anatinus
ENSCING00000005471	-	89	52.196	ENSOCUG00000027975	-	88	51.579	Oryctolagus_cuniculus
ENSCING00000005471	-	71	45.574	ENSOCUG00000005727	-	86	45.574	Oryctolagus_cuniculus
ENSCING00000005471	-	90	47.532	ENSOCUG00000016070	-	88	47.090	Oryctolagus_cuniculus
ENSCING00000005471	-	89	50.789	ENSOCUG00000021896	-	87	50.529	Oryctolagus_cuniculus
ENSCING00000005471	-	88	56.085	ENSORLG00000017930	eif5	87	56.959	Oryzias_latipes
ENSCING00000005471	-	88	56.085	ENSORLG00020013282	eif5	81	63.415	Oryzias_latipes_hni
ENSCING00000005471	-	88	56.085	ENSORLG00015009812	eif5	87	56.959	Oryzias_latipes_hsok
ENSCING00000005471	-	88	62.353	ENSOMEG00000003991	eif5	87	57.216	Oryzias_melastigma
ENSCING00000005471	-	89	54.974	ENSOGAG00000027506	EIF5	88	54.737	Otolemur_garnettii
ENSCING00000005471	-	88	54.474	ENSOARG00000005628	EIF5	88	54.474	Ovis_aries
ENSCING00000005471	-	89	53.264	ENSPPAG00000039883	EIF5	88	54.663	Pan_paniscus
ENSCING00000005471	-	92	42.278	ENSPPAG00000043651	-	88	43.127	Pan_paniscus
ENSCING00000005471	-	89	54.712	ENSPPRG00000000987	EIF5	88	54.404	Panthera_pardus
ENSCING00000005471	-	89	54.712	ENSPTIG00000017471	EIF5	88	54.404	Panthera_tigris_altaica
ENSCING00000005471	-	89	53.264	ENSPTRG00000006753	EIF5	88	54.663	Pan_troglodytes
ENSCING00000005471	-	57	45.306	ENSPTRG00000046452	-	98	38.889	Pan_troglodytes
ENSCING00000005471	-	92	40.000	ENSPANG00000017941	-	88	40.369	Papio_anubis
ENSCING00000005471	-	89	51.263	ENSPANG00000004814	EIF5	89	53.133	Papio_anubis
ENSCING00000005471	-	88	55.243	ENSPKIG00000019525	eif5	87	56.283	Paramormyrops_kingsleyae
ENSCING00000005471	-	88	55.673	ENSPSIG00000015356	EIF5	88	56.021	Pelodiscus_sinensis
ENSCING00000005471	-	99	45.342	ENSPMGG00000011364	eif5	86	49.347	Periophthalmus_magnuspinnatus
ENSCING00000005471	-	89	54.974	ENSPEMG00000015312	-	88	54.663	Peromyscus_maniculatus_bairdii
ENSCING00000005471	-	89	54.974	ENSPCIG00000011319	EIF5	88	54.922	Phascolarctos_cinereus
ENSCING00000005471	-	88	56.349	ENSPFOG00000019490	eif5	87	56.464	Poecilia_formosa
ENSCING00000005471	-	88	56.349	ENSPLAG00000013444	eif5	87	56.464	Poecilia_latipinna
ENSCING00000005471	-	88	56.349	ENSPMEG00000001269	eif5	87	56.959	Poecilia_mexicana
ENSCING00000005471	-	88	56.349	ENSPREG00000005696	eif5	87	56.959	Poecilia_reticulata
ENSCING00000005471	-	89	53.003	ENSPPYG00000006169	EIF5	88	54.663	Pongo_abelii
ENSCING00000005471	-	89	53.003	ENSPCAG00000003663	EIF5	89	52.756	Procavia_capensis
ENSCING00000005471	-	89	54.974	ENSPCOG00000018505	EIF5	88	54.737	Propithecus_coquereli
ENSCING00000005471	-	89	51.436	ENSPVAG00000007853	EIF5	88	51.295	Pteropus_vampyrus
ENSCING00000005471	-	88	55.820	ENSPNYG00000017114	eif5	87	55.844	Pundamilia_nyererei
ENSCING00000005471	-	88	55.673	ENSPNAG00000029712	EIF5	88	56.919	Pygocentrus_nattereri
ENSCING00000005471	-	89	55.263	ENSPNAG00000004115	eif5	79	66.279	Pygocentrus_nattereri
ENSCING00000005471	-	89	55.381	ENSRNOG00000010218	NEWGENE_619861	88	54.663	Rattus_norvegicus
ENSCING00000005471	-	92	40.704	ENSRBIG00000045000	-	86	43.714	Rhinopithecus_bieti
ENSCING00000005471	-	89	46.214	ENSRBIG00000028634	-	87	46.891	Rhinopithecus_bieti
ENSCING00000005471	-	89	53.003	ENSRBIG00000038446	-	88	54.922	Rhinopithecus_bieti
ENSCING00000005471	-	92	40.955	ENSRROG00000039706	-	86	43.714	Rhinopithecus_roxellana
ENSCING00000005471	-	89	53.003	ENSRROG00000037169	EIF5	88	54.922	Rhinopithecus_roxellana
ENSCING00000005471	-	88	34.988	YPR041W	TIF5	97	34.321	Saccharomyces_cerevisiae
ENSCING00000005471	-	89	43.421	ENSSBOG00000022170	-	98	33.213	Saimiri_boliviensis_boliviensis
ENSCING00000005471	-	89	54.974	ENSSHAG00000017066	EIF5	88	54.922	Sarcophilus_harrisii
ENSCING00000005471	-	88	56.878	ENSSFOG00015014173	eif5	80	65.143	Scleropages_formosus
ENSCING00000005471	-	88	56.878	ENSSMAG00000006036	eif5	87	57.216	Scophthalmus_maximus
ENSCING00000005471	-	88	56.349	ENSSDUG00000004467	eif5	87	56.623	Seriola_dumerili
ENSCING00000005471	-	88	56.349	ENSSLDG00000014272	eif5	90	56.623	Seriola_lalandi_dorsalis
ENSCING00000005471	-	75	43.789	ENSSARG00000008082	EIF5	86	43.558	Sorex_araneus
ENSCING00000005471	-	88	54.881	ENSSPUG00000004139	EIF5	88	55.181	Sphenodon_punctatus
ENSCING00000005471	-	88	55.789	ENSSPAG00000017515	eif5	87	56.883	Stegastes_partitus
ENSCING00000005471	-	88	39.948	ENSSSCG00000027421	-	87	41.451	Sus_scrofa
ENSCING00000005471	-	63	72.165	ENSSSCG00000032529	-	73	72.165	Sus_scrofa
ENSCING00000005471	-	88	54.737	ENSSSCG00000034709	-	88	54.922	Sus_scrofa
ENSCING00000005471	-	88	54.354	ENSTGUG00000012841	EIF5	88	54.145	Taeniopygia_guttata
ENSCING00000005471	-	99	53.580	ENSTRUG00000006600	eif5	87	56.464	Takifugu_rubripes
ENSCING00000005471	-	99	54.128	ENSTNIG00000012394	eif5	90	56.489	Tetraodon_nigroviridis
ENSCING00000005471	-	88	54.737	ENSTBEG00000009605	EIF5	88	54.663	Tupaia_belangeri
ENSCING00000005471	-	82	54.108	ENSTTRG00000002384	EIF5	99	54.318	Tursiops_truncatus
ENSCING00000005471	-	89	54.712	ENSUAMG00000026118	EIF5	88	54.404	Ursus_americanus
ENSCING00000005471	-	89	54.712	ENSUMAG00000024899	EIF5	88	54.404	Ursus_maritimus
ENSCING00000005471	-	89	54.047	ENSVPAG00000007579	EIF5	88	54.404	Vicugna_pacos
ENSCING00000005471	-	88	54.474	ENSVVUG00000000498	EIF5	88	54.404	Vulpes_vulpes
ENSCING00000005471	-	57	52.590	ENSXETG00000012766	eif5	98	54.878	Xenopus_tropicalis
ENSCING00000005471	-	88	56.878	ENSXCOG00000004401	eif5	87	56.658	Xiphophorus_couchianus
ENSCING00000005471	-	88	56.085	ENSXMAG00000025924	eif5	87	56.701	Xiphophorus_maculatus