EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005564 (Gene tree)
Gene ID: 100169992
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6355 bases
Position: chr10:2564855-2571209
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011542	KH_1	PF00013.29	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011542	-	1520	-	ENSCINP00000011542	494 (aa)	-	F6URQ9

Gene Model

Click here to download ENSCING00000005564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005564	-	87	56.109	ENSAPOG00000012341	sf1	60	56.398	Acanthochromis_polyacanthus
ENSCING00000005564	-	74	60.372	ENSAMEG00000017828	SF1	58	58.115	Ailuropoda_melanoleuca
ENSCING00000005564	-	92	53.159	ENSACIG00000016514	sf1	58	55.314	Amphilophus_citrinellus
ENSCING00000005564	-	87	57.045	ENSAOCG00000010934	sf1	60	55.687	Amphiprion_ocellaris
ENSCING00000005564	-	87	57.045	ENSAPEG00000009498	sf1	60	55.687	Amphiprion_percula
ENSCING00000005564	-	85	57.541	ENSATEG00000001894	sf1	60	57.007	Anabas_testudineus
ENSCING00000005564	-	74	60.372	ENSANAG00000026664	-	86	59.946	Aotus_nancymaae
ENSCING00000005564	-	72	57.222	ENSANAG00000022607	-	74	61.981	Aotus_nancymaae
ENSCING00000005564	-	92	52.814	ENSACLG00000007633	sf1	62	55.847	Astatotilapia_calliptera
ENSCING00000005564	-	92	55.202	ENSAMXG00000003630	sf1	53	56.338	Astyanax_mexicanus
ENSCING00000005564	-	74	60.372	ENSBTAG00000001035	SF1	62	58.115	Bos_taurus
ENSCING00000005564	-	74	60.372	ENSCJAG00000002780	SF1	59	58.115	Callithrix_jacchus
ENSCING00000005564	-	74	60.372	ENSCAFG00000014239	SF1	59	58.115	Canis_familiaris
ENSCING00000005564	-	74	60.372	ENSCAFG00020014381	SF1	59	58.115	Canis_lupus_dingo
ENSCING00000005564	-	74	60.372	ENSCHIG00000025867	SF1	69	58.115	Capra_hircus
ENSCING00000005564	-	55	70.696	ENSTSYG00000033618	SF1	80	70.696	Carlito_syrichta
ENSCING00000005564	-	74	60.372	ENSCAPG00000010762	SF1	65	59.946	Cavia_aperea
ENSCING00000005564	-	74	60.372	ENSCPOG00000012290	SF1	70	58.115	Cavia_porcellus
ENSCING00000005564	-	74	60.372	ENSCCAG00000037881	SF1	86	59.946	Cebus_capucinus
ENSCING00000005564	-	65	60.185	ENSCCAG00000023781	-	68	60.703	Cebus_capucinus
ENSCING00000005564	-	74	60.372	ENSCATG00000011564	SF1	73	67.093	Cercocebus_atys
ENSCING00000005564	-	74	60.372	ENSCSAG00000007258	SF1	69	58.115	Chlorocebus_sabaeus
ENSCING00000005564	-	72	55.249	ENSCHOG00000006008	SF1	68	52.989	Choloepus_hoffmanni
ENSCING00000005564	-	80	87.056	ENSCSAVG00000009055	-	60	92.400	Ciona_savignyi
ENSCING00000005564	-	74	60.372	ENSCANG00000042201	SF1	74	67.093	Colobus_angolensis_palliatus
ENSCING00000005564	-	72	61.667	ENSCGRG00001003677	Sf1	54	67.093	Cricetulus_griseus_chok1gshd
ENSCING00000005564	-	72	61.667	ENSCGRG00000001708	Sf1	57	67.093	Cricetulus_griseus_crigri
ENSCING00000005564	-	83	55.269	ENSCSEG00000014375	sf1	58	55.582	Cynoglossus_semilaevis
ENSCING00000005564	-	92	54.604	ENSCVAG00000001670	sf1	50	67.197	Cyprinodon_variegatus
ENSCING00000005564	-	85	57.773	ENSDARG00000008188	sf1	56	67.610	Danio_rerio
ENSCING00000005564	-	74	60.638	ENSDNOG00000001282	SF1	69	58.115	Dasypus_novemcinctus
ENSCING00000005564	-	74	60.372	ENSDORG00000016334	Sf1	59	58.115	Dipodomys_ordii
ENSCING00000005564	-	94	49.203	ENSEBUG00000012728	sf1	57	52.414	Eptatretus_burgeri
ENSCING00000005564	-	74	60.106	ENSEASG00005018272	SF1	69	57.853	Equus_asinus_asinus
ENSCING00000005564	-	74	60.372	ENSECAG00000024544	SF1	69	58.115	Equus_caballus
ENSCING00000005564	-	67	61.721	ENSEEUG00000001058	SF1	83	60.961	Erinaceus_europaeus
ENSCING00000005564	-	83	57.210	ENSELUG00000013225	sf1	53	57.518	Esox_lucius
ENSCING00000005564	-	74	60.372	ENSFCAG00000012231	SF1	59	58.115	Felis_catus
ENSCING00000005564	-	74	60.372	ENSFDAG00000009833	SF1	65	59.946	Fukomys_damarensis
ENSCING00000005564	-	87	58.124	ENSFHEG00000022656	sf1	60	57.518	Fundulus_heteroclitus
ENSCING00000005564	-	66	65.373	ENSGMOG00000007469	sf1	57	66.349	Gadus_morhua
ENSCING00000005564	-	83	55.765	ENSGAFG00000019284	sf1	58	67.197	Gambusia_affinis
ENSCING00000005564	-	71	62.011	ENSGACG00000000826	sf1	61	61.096	Gasterosteus_aculeatus
ENSCING00000005564	-	92	53.996	ENSHBUG00000011598	sf1	60	56.028	Haplochromis_burtoni
ENSCING00000005564	-	74	60.372	ENSHGLG00000009541	SF1	64	59.946	Heterocephalus_glaber_female
ENSCING00000005564	-	74	60.372	ENSHGLG00100013879	-	65	59.946	Heterocephalus_glaber_male
ENSCING00000005564	-	61	64.803	ENSHGLG00100008076	-	60	65.529	Heterocephalus_glaber_male
ENSCING00000005564	-	66	60.843	ENSHGLG00100008255	-	58	65.744	Heterocephalus_glaber_male
ENSCING00000005564	-	92	56.061	ENSHCOG00000011388	sf1	60	56.563	Hippocampus_comes
ENSCING00000005564	-	74	60.372	ENSSTOG00000009790	-	60	58.115	Ictidomys_tridecemlineatus
ENSCING00000005564	-	72	52.500	ENSSTOG00000024353	-	54	56.550	Ictidomys_tridecemlineatus
ENSCING00000005564	-	92	53.879	ENSKMAG00000005854	sf1	62	56.595	Kryptolebias_marmoratus
ENSCING00000005564	-	83	57.518	ENSLBEG00000019836	sf1	64	56.971	Labrus_bergylta
ENSCING00000005564	-	73	57.493	ENSLACG00000018493	SF1	59	61.371	Latimeria_chalumnae
ENSCING00000005564	-	93	53.909	ENSLOCG00000002130	sf1	65	57.210	Lepisosteus_oculatus
ENSCING00000005564	-	74	60.372	ENSLAFG00000007201	SF1	64	57.584	Loxodonta_africana
ENSCING00000005564	-	74	60.372	ENSMFAG00000033122	SF1	73	67.093	Macaca_fascicularis
ENSCING00000005564	-	74	60.372	ENSMMUG00000022606	SF1	89	59.946	Macaca_mulatta
ENSCING00000005564	-	74	60.372	ENSMNEG00000037901	SF1	73	67.093	Macaca_nemestrina
ENSCING00000005564	-	74	60.372	ENSMLEG00000040706	SF1	74	67.093	Mandrillus_leucophaeus
ENSCING00000005564	-	92	55.603	ENSMAMG00000001780	sf1	60	55.952	Mastacembelus_armatus
ENSCING00000005564	-	92	53.780	ENSMZEG00005009196	sf1	60	56.028	Maylandia_zebra
ENSCING00000005564	-	72	61.667	ENSMAUG00000014064	Sf1	54	67.093	Mesocricetus_auratus
ENSCING00000005564	-	74	60.372	ENSMICG00000001202	SF1	86	59.786	Microcebus_murinus
ENSCING00000005564	-	72	61.667	ENSMOCG00000022038	Sf1	54	67.093	Microtus_ochrogaster
ENSCING00000005564	-	92	54.978	ENSMMOG00000020474	sf1	59	55.072	Mola_mola
ENSCING00000005564	-	72	61.667	ENSMODG00000029407	SF1	67	67.093	Monodelphis_domestica
ENSCING00000005564	-	92	53.813	ENSMALG00000020521	sf1	64	54.589	Monopterus_albus
ENSCING00000005564	-	72	61.667	MGP_CAROLIEiJ_G0022607	Sf1	99	71.591	Mus_caroli
ENSCING00000005564	-	72	61.667	ENSMUSG00000024949	Sf1	99	71.591	Mus_musculus
ENSCING00000005564	-	72	61.667	MGP_PahariEiJ_G0014101	Sf1	99	71.591	Mus_pahari
ENSCING00000005564	-	72	61.667	MGP_SPRETEiJ_G0023518	Sf1	99	71.591	Mus_spretus
ENSCING00000005564	-	74	60.372	ENSMPUG00000012684	SF1	59	58.115	Mustela_putorius_furo
ENSCING00000005564	-	74	60.638	ENSMLUG00000015217	-	59	58.115	Myotis_lucifugus
ENSCING00000005564	-	73	59.452	ENSMLUG00000029800	-	54	64.151	Myotis_lucifugus
ENSCING00000005564	-	72	61.667	ENSNGAG00000005550	Sf1	54	67.093	Nannospalax_galili
ENSCING00000005564	-	92	53.463	ENSNBRG00000017606	sf1	61	56.325	Neolamprologus_brichardi
ENSCING00000005564	-	74	60.638	ENSNLEG00000005236	-	74	67.093	Nomascus_leucogenys
ENSCING00000005564	-	71	61.732	ENSMEUG00000013424	SF1	58	67.203	Notamacropus_eugenii
ENSCING00000005564	-	64	62.617	ENSOPRG00000005008	SF1	54	68.978	Ochotona_princeps
ENSCING00000005564	-	74	57.713	ENSODEG00000006102	-	60	55.497	Octodon_degus
ENSCING00000005564	-	92	53.780	ENSONIG00000015728	sf1	60	56.028	Oreochromis_niloticus
ENSCING00000005564	-	59	60.667	ENSOANG00000002909	SF1	59	67.213	Ornithorhynchus_anatinus
ENSCING00000005564	-	74	60.372	ENSOCUG00000026486	SF1	60	58.115	Oryctolagus_cuniculus
ENSCING00000005564	-	95	55.417	ENSORLG00000011853	sf1	59	57.554	Oryzias_latipes
ENSCING00000005564	-	95	55.208	ENSORLG00020011834	sf1	59	57.143	Oryzias_latipes_hni
ENSCING00000005564	-	92	56.156	ENSORLG00015012855	sf1	59	57.554	Oryzias_latipes_hsok
ENSCING00000005564	-	92	54.762	ENSOMEG00000005210	sf1	60	56.667	Oryzias_melastigma
ENSCING00000005564	-	74	60.372	ENSOGAG00000016196	SF1	59	58.115	Otolemur_garnettii
ENSCING00000005564	-	74	60.372	ENSOARG00000009166	SF1	66	58.115	Ovis_aries
ENSCING00000005564	-	74	60.963	ENSPPAG00000002799	-	88	59.946	Pan_paniscus
ENSCING00000005564	-	74	60.372	ENSPPRG00000013566	SF1	59	58.696	Panthera_pardus
ENSCING00000005564	-	74	60.372	ENSPTIG00000016141	SF1	66	59.946	Panthera_tigris_altaica
ENSCING00000005564	-	74	60.963	ENSPTRG00000003846	SF1	85	59.946	Pan_troglodytes
ENSCING00000005564	-	74	60.372	ENSPANG00000020754	SF1	73	67.093	Papio_anubis
ENSCING00000005564	-	64	59.202	ENSPKIG00000012116	sf1	65	65.370	Paramormyrops_kingsleyae
ENSCING00000005564	-	72	61.667	ENSPEMG00000010463	Sf1	54	67.093	Peromyscus_maniculatus_bairdii
ENSCING00000005564	-	72	61.667	ENSPCIG00000018173	SF1	50	67.093	Phascolarctos_cinereus
ENSCING00000005564	-	83	56.738	ENSPFOG00000013683	sf1	53	66.981	Poecilia_formosa
ENSCING00000005564	-	83	55.765	ENSPMEG00000005726	sf1	60	56.057	Poecilia_mexicana
ENSCING00000005564	-	83	55.896	ENSPREG00000004155	sf1	60	56.057	Poecilia_reticulata
ENSCING00000005564	-	74	60.372	ENSPPYG00000003098	-	71	58.115	Pongo_abelii
ENSCING00000005564	-	74	60.372	ENSPCAG00000013631	SF1	60	55.961	Procavia_capensis
ENSCING00000005564	-	74	60.372	ENSPCOG00000027546	SF1	86	59.786	Propithecus_coquereli
ENSCING00000005564	-	74	60.638	ENSPVAG00000016938	SF1	57	58.115	Pteropus_vampyrus
ENSCING00000005564	-	92	53.419	ENSPNYG00000004673	sf1	60	55.792	Pundamilia_nyererei
ENSCING00000005564	-	92	55.460	ENSPNAG00000013072	sf1	60	56.872	Pygocentrus_nattereri
ENSCING00000005564	-	74	60.372	ENSRBIG00000042818	SF1	74	67.093	Rhinopithecus_bieti
ENSCING00000005564	-	74	60.372	ENSRROG00000045655	SF1	84	59.946	Rhinopithecus_roxellana
ENSCING00000005564	-	69	37.293	YLR116W	MSL5	66	38.941	Saccharomyces_cerevisiae
ENSCING00000005564	-	69	53.521	ENSSBOG00000022267	-	84	53.779	Saimiri_boliviensis_boliviensis
ENSCING00000005564	-	63	67.302	ENSSHAG00000006841	SF1	58	67.412	Sarcophilus_harrisii
ENSCING00000005564	-	86	57.243	ENSSFOG00015021978	sf1	59	56.867	Scleropages_formosus
ENSCING00000005564	-	87	56.849	ENSSMAG00000007549	sf1	63	55.904	Scophthalmus_maximus
ENSCING00000005564	-	83	56.872	ENSSDUG00000003903	sf1	62	55.529	Seriola_dumerili
ENSCING00000005564	-	83	56.355	ENSSLDG00000013075	sf1	60	55.294	Seriola_lalandi_dorsalis
ENSCING00000005564	-	72	58.889	ENSSARG00000008180	SF1	59	63.898	Sorex_araneus
ENSCING00000005564	-	92	54.176	ENSSPAG00000019060	sf1	60	55.792	Stegastes_partitus
ENSCING00000005564	-	74	60.638	ENSSSCG00000013021	SF1	69	58.115	Sus_scrofa
ENSCING00000005564	-	72	53.784	ENSTNIG00000004820	sf1	59	58.044	Tetraodon_nigroviridis
ENSCING00000005564	-	74	56.117	ENSTTRG00000008857	SF1	67	54.011	Tursiops_truncatus
ENSCING00000005564	-	54	57.509	ENSUAMG00000011977	SF1	52	55.755	Ursus_americanus
ENSCING00000005564	-	74	60.372	ENSUMAG00000007268	SF1	72	58.115	Ursus_maritimus
ENSCING00000005564	-	74	60.372	ENSVVUG00000028585	SF1	69	58.115	Vulpes_vulpes
ENSCING00000005564	-	77	60.104	ENSXETG00000008434	sf1	54	67.093	Xenopus_tropicalis
ENSCING00000005564	-	72	62.604	ENSXCOG00000003704	sf1	60	67.302	Xiphophorus_couchianus
ENSCING00000005564	-	83	55.765	ENSXMAG00000007822	sf1	62	56.057	Xiphophorus_maculatus