EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005576 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3477 bases
Position: chr10:2560789-2564265
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011555	ResIII	PF04851.15	6e-07	1	1
ENSCINP00000011555	rRNA_proc-arch	PF13234.6	4.7e-22	1	1
ENSCINP00000011555	DEAD	PF00270.29	6.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011555	-	3477	-	ENSCINP00000011555	1158 (aa)	-	F6U4L6

Gene Model

Click here to download ENSCING00000005576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005576	-	99	50.804	ENSG00000204351	SKIV2L	96	52.542	Homo_sapiens
ENSCING00000005576	-	99	50.690	ENSAPOG00000008257	skiv2l	93	50.690	Acanthochromis_polyacanthus
ENSCING00000005576	-	99	50.590	ENSAMEG00000002078	SKIV2L	94	51.100	Ailuropoda_melanoleuca
ENSCING00000005576	-	99	50.560	ENSACIG00000016719	skiv2l	93	50.731	Amphilophus_citrinellus
ENSCING00000005576	-	99	51.071	ENSAOCG00000017352	skiv2l	93	51.071	Amphiprion_ocellaris
ENSCING00000005576	-	99	50.985	ENSAPEG00000001055	skiv2l	93	50.985	Amphiprion_percula
ENSCING00000005576	-	99	51.284	ENSATEG00000007601	skiv2l	93	51.455	Anabas_testudineus
ENSCING00000005576	-	83	56.821	ENSACAG00000011746	SKIV2L	93	52.513	Anolis_carolinensis
ENSCING00000005576	-	99	51.145	ENSANAG00000037992	SKIV2L	94	51.145	Aotus_nancymaae
ENSCING00000005576	-	99	51.109	ENSACLG00000006886	skiv2l	93	51.330	Astatotilapia_calliptera
ENSCING00000005576	-	98	50.861	ENSAMXG00000011517	skiv2l	93	50.728	Astyanax_mexicanus
ENSCING00000005576	-	99	51.100	ENSBTAG00000005587	SKIV2L	94	51.224	Bos_taurus
ENSCING00000005576	-	98	38.830	WBGene00008502	skih-2	95	38.993	Caenorhabditis_elegans
ENSCING00000005576	-	99	50.975	ENSCJAG00000002263	SKIV2L	94	50.975	Callithrix_jacchus
ENSCING00000005576	-	99	50.889	ENSCAFG00000000679	SKIV2L	94	51.100	Canis_familiaris
ENSCING00000005576	-	99	50.889	ENSCAFG00020000948	SKIV2L	94	51.100	Canis_lupus_dingo
ENSCING00000005576	-	99	51.184	ENSCHIG00000012897	SKIV2L	94	51.310	Capra_hircus
ENSCING00000005576	-	99	51.184	ENSTSYG00000012133	SKIV2L	94	51.096	Carlito_syrichta
ENSCING00000005576	-	99	50.974	ENSCPOG00000001307	SKIV2L	94	51.100	Cavia_porcellus
ENSCING00000005576	-	99	50.974	ENSCCAG00000026206	SKIV2L	94	52.627	Cebus_capucinus
ENSCING00000005576	-	99	50.847	ENSCATG00000036901	SKIV2L	94	51.058	Cercocebus_atys
ENSCING00000005576	-	99	50.764	ENSCLAG00000007678	SKIV2L	94	50.934	Chinchilla_lanigera
ENSCING00000005576	-	99	51.058	ENSCSAG00000008988	SKIV2L	94	51.143	Chlorocebus_sabaeus
ENSCING00000005576	-	86	58.011	ENSCPBG00000000343	SKIV2L	89	58.011	Chrysemys_picta_bellii
ENSCING00000005576	-	99	50.678	ENSCANG00000039709	SKIV2L	94	52.442	Colobus_angolensis_palliatus
ENSCING00000005576	-	99	51.402	ENSCGRG00001008385	Skiv2l	94	51.402	Cricetulus_griseus_chok1gshd
ENSCING00000005576	-	99	50.085	ENSCSEG00000011326	skiv2l	93	50.468	Cynoglossus_semilaevis
ENSCING00000005576	-	99	50.643	ENSCVAG00000003072	skiv2l	94	50.643	Cyprinodon_variegatus
ENSCING00000005576	-	99	51.149	ENSDARG00000062206	skiv2l	93	51.149	Danio_rerio
ENSCING00000005576	-	99	49.873	ENSDNOG00000037590	SKIV2L	94	50.421	Dasypus_novemcinctus
ENSCING00000005576	-	100	43.562	FBgn0039117	tst	97	43.562	Drosophila_melanogaster
ENSCING00000005576	-	73	59.494	ENSETEG00000009522	SKIV2L	69	59.494	Echinops_telfairi
ENSCING00000005576	-	92	49.321	ENSEBUG00000013680	-	91	49.951	Eptatretus_burgeri
ENSCING00000005576	-	99	51.197	ENSEASG00005015534	SKIV2L	99	51.282	Equus_asinus_asinus
ENSCING00000005576	-	94	50.447	ENSECAG00000021823	SKIV2L	89	50.537	Equus_caballus
ENSCING00000005576	-	55	65.217	ENSEEUG00000005049	SKIV2L	57	65.217	Erinaceus_europaeus
ENSCING00000005576	-	99	50.085	ENSELUG00000000181	skiv2l	93	50.085	Esox_lucius
ENSCING00000005576	-	99	50.975	ENSFCAG00000004519	SKIV2L	94	51.230	Felis_catus
ENSCING00000005576	-	99	50.256	ENSFDAG00000009438	SKIV2L	93	50.382	Fukomys_damarensis
ENSCING00000005576	-	99	51.109	ENSFHEG00000008853	skiv2l	93	51.109	Fundulus_heteroclitus
ENSCING00000005576	-	98	50.215	ENSGMOG00000005926	skiv2l	92	50.215	Gadus_morhua
ENSCING00000005576	-	82	50.363	ENSGALG00000035499	SKIV2L	99	50.459	Gallus_gallus
ENSCING00000005576	-	99	50.987	ENSGAFG00000002382	skiv2l	93	50.987	Gambusia_affinis
ENSCING00000005576	-	98	51.042	ENSGACG00000002927	skiv2l	91	51.215	Gasterosteus_aculeatus
ENSCING00000005576	-	99	50.889	ENSGGOG00000002270	SKIV2L	94	52.535	Gorilla_gorilla
ENSCING00000005576	-	99	51.024	ENSHBUG00000000726	skiv2l	93	51.245	Haplochromis_burtoni
ENSCING00000005576	-	99	50.296	ENSHGLG00000016596	SKIV2L	94	50.676	Heterocephalus_glaber_female
ENSCING00000005576	-	99	49.366	ENSHGLG00100014161	SKIV2L	93	49.493	Heterocephalus_glaber_male
ENSCING00000005576	-	99	49.784	ENSHCOG00000007191	skiv2l	94	49.784	Hippocampus_comes
ENSCING00000005576	-	99	50.299	ENSIPUG00000016263	skiv2l	94	50.555	Ictalurus_punctatus
ENSCING00000005576	-	99	50.972	ENSSTOG00000014596	SKIV2L	94	51.184	Ictidomys_tridecemlineatus
ENSCING00000005576	-	56	52.203	ENSLACG00000002986	-	55	52.203	Latimeria_chalumnae
ENSCING00000005576	-	99	51.143	ENSLAFG00000014231	SKIV2L	94	51.143	Loxodonta_africana
ENSCING00000005576	-	99	50.847	ENSMFAG00000034235	SKIV2L	94	52.627	Macaca_fascicularis
ENSCING00000005576	-	99	50.809	ENSMMUG00000000736	SKIV2L	94	52.627	Macaca_mulatta
ENSCING00000005576	-	99	50.847	ENSMNEG00000044474	SKIV2L	94	52.627	Macaca_nemestrina
ENSCING00000005576	-	99	50.847	ENSMLEG00000030512	SKIV2L	94	51.058	Mandrillus_leucophaeus
ENSCING00000005576	-	99	51.111	ENSMAMG00000002927	skiv2l	93	51.111	Mastacembelus_armatus
ENSCING00000005576	-	99	51.024	ENSMZEG00005026415	skiv2l	93	51.245	Maylandia_zebra
ENSCING00000005576	-	74	43.396	ENSMGAG00000001320	SKIV2L	96	43.396	Meleagris_gallopavo
ENSCING00000005576	-	99	51.358	ENSMAUG00000018613	Skiv2l	94	51.273	Mesocricetus_auratus
ENSCING00000005576	-	99	50.974	ENSMICG00000046331	SKIV2L	94	51.143	Microcebus_murinus
ENSCING00000005576	-	99	50.425	ENSMOCG00000014240	Skiv2l	93	50.254	Microtus_ochrogaster
ENSCING00000005576	-	99	50.647	ENSMMOG00000014547	skiv2l	92	50.647	Mola_mola
ENSCING00000005576	-	83	55.831	ENSMODG00000015052	SKIV2L	93	51.315	Monodelphis_domestica
ENSCING00000005576	-	97	50.614	ENSMALG00000010535	skiv2l	92	50.614	Monopterus_albus
ENSCING00000005576	-	99	50.634	MGP_CAROLIEiJ_G0021477	Skiv2l	94	50.719	Mus_caroli
ENSCING00000005576	-	99	50.719	ENSMUSG00000040356	Skiv2l	94	50.803	Mus_musculus
ENSCING00000005576	-	99	50.888	MGP_PahariEiJ_G0020472	Skiv2l	94	50.888	Mus_pahari
ENSCING00000005576	-	99	50.803	MGP_SPRETEiJ_G0022382	Skiv2l	94	50.888	Mus_spretus
ENSCING00000005576	-	99	51.399	ENSMPUG00000010567	SKIV2L	94	51.395	Mustela_putorius_furo
ENSCING00000005576	-	99	51.269	ENSMLUG00000000628	SKIV2L	94	51.269	Myotis_lucifugus
ENSCING00000005576	-	99	50.172	ENSNBRG00000018650	skiv2l	92	50.344	Neolamprologus_brichardi
ENSCING00000005576	-	99	50.425	ENSNLEG00000006451	SKIV2L	93	52.130	Nomascus_leucogenys
ENSCING00000005576	-	59	57.093	ENSMEUG00000006072	SKIV2L	72	52.212	Notamacropus_eugenii
ENSCING00000005576	-	99	50.977	ENSOPRG00000003972	SKIV2L	94	51.107	Ochotona_princeps
ENSCING00000005576	-	99	50.547	ENSODEG00000017516	SKIV2L	94	50.802	Octodon_degus
ENSCING00000005576	-	99	51.117	ENSONIG00000013500	skiv2l	93	51.115	Oreochromis_niloticus
ENSCING00000005576	-	99	50.720	ENSOCUG00000007019	SKIV2L	94	51.057	Oryctolagus_cuniculus
ENSCING00000005576	-	99	51.159	ENSORLG00000002021	skiv2l	93	51.502	Oryzias_latipes
ENSCING00000005576	-	99	50.987	ENSORLG00020009462	skiv2l	93	51.330	Oryzias_latipes_hni
ENSCING00000005576	-	99	51.073	ENSORLG00015016750	skiv2l	93	51.416	Oryzias_latipes_hsok
ENSCING00000005576	-	99	50.599	ENSOMEG00000008531	skiv2l	93	50.771	Oryzias_melastigma
ENSCING00000005576	-	99	51.180	ENSOGAG00000009578	SKIV2L	94	51.180	Otolemur_garnettii
ENSCING00000005576	-	99	48.586	ENSOARG00000002411	-	92	48.712	Ovis_aries
ENSCING00000005576	-	99	50.716	ENSPPAG00000040211	SKIV2L	94	52.337	Pan_paniscus
ENSCING00000005576	-	99	50.889	ENSPPRG00000005017	SKIV2L	94	51.143	Panthera_pardus
ENSCING00000005576	-	99	50.464	ENSPTIG00000021656	SKIV2L	94	50.804	Panthera_tigris_altaica
ENSCING00000005576	-	99	51.017	ENSPTRG00000017997	SKIV2L	94	52.675	Pan_troglodytes
ENSCING00000005576	-	99	49.916	ENSPANG00000011501	SKIV2L	94	50.126	Papio_anubis
ENSCING00000005576	-	99	50.467	ENSPKIG00000011876	skiv2l	93	50.382	Paramormyrops_kingsleyae
ENSCING00000005576	-	99	49.399	ENSPMGG00000019707	skiv2l	92	49.570	Periophthalmus_magnuspinnatus
ENSCING00000005576	-	99	51.060	ENSPEMG00000019001	Skiv2l	94	51.145	Peromyscus_maniculatus_bairdii
ENSCING00000005576	-	99	50.932	ENSPCIG00000018792	SKIV2L	93	51.102	Phascolarctos_cinereus
ENSCING00000005576	-	99	50.598	ENSPFOG00000002424	skiv2l	93	50.598	Poecilia_formosa
ENSCING00000005576	-	99	50.684	ENSPLAG00000018304	skiv2l	93	50.684	Poecilia_latipinna
ENSCING00000005576	-	99	50.730	ENSPMEG00000006997	skiv2l	93	50.598	Poecilia_mexicana
ENSCING00000005576	-	99	50.043	ENSPREG00000002277	skiv2l	92	50.043	Poecilia_reticulata
ENSCING00000005576	-	99	50.466	ENSPPYG00000016472	SKIV2L	94	50.550	Pongo_abelii
ENSCING00000005576	-	75	57.447	ENSPCAG00000004178	SKIV2L	70	57.447	Procavia_capensis
ENSCING00000005576	-	99	50.804	ENSPCOG00000010308	SKIV2L	94	50.974	Propithecus_coquereli
ENSCING00000005576	-	99	51.141	ENSPVAG00000005136	SKIV2L	94	51.141	Pteropus_vampyrus
ENSCING00000005576	-	99	49.441	ENSPNYG00000017853	skiv2l	92	49.441	Pundamilia_nyererei
ENSCING00000005576	-	99	50.852	ENSPNAG00000011823	skiv2l	93	51.024	Pygocentrus_nattereri
ENSCING00000005576	-	99	50.759	ENSRNOG00000000421	Skiv2l	94	50.759	Rattus_norvegicus
ENSCING00000005576	-	99	49.706	ENSRBIG00000035485	SKIV2L	93	51.056	Rhinopithecus_bieti
ENSCING00000005576	-	99	50.763	ENSRROG00000036429	SKIV2L	94	50.974	Rhinopithecus_roxellana
ENSCING00000005576	-	98	38.718	YLR398C	-	92	38.681	Saccharomyces_cerevisiae
ENSCING00000005576	-	99	50.974	ENSSBOG00000027920	SKIV2L	94	50.974	Saimiri_boliviensis_boliviensis
ENSCING00000005576	-	99	50.891	ENSSHAG00000008963	SKIV2L	93	50.382	Sarcophilus_harrisii
ENSCING00000005576	-	99	50.467	ENSSFOG00015016930	skiv2l	93	50.467	Scleropages_formosus
ENSCING00000005576	-	99	50.298	ENSSMAG00000020185	skiv2l	94	50.085	Scophthalmus_maximus
ENSCING00000005576	-	99	50.555	ENSSDUG00000019977	skiv2l	93	50.555	Seriola_dumerili
ENSCING00000005576	-	99	50.130	ENSSLDG00000024382	skiv2l	92	50.130	Seriola_lalandi_dorsalis
ENSCING00000005576	-	100	50.165	ENSSPUG00000012945	SKIV2L	93	50.662	Sphenodon_punctatus
ENSCING00000005576	-	93	50.227	ENSSPAG00000012904	skiv2l	91	50.227	Stegastes_partitus
ENSCING00000005576	-	99	51.057	ENSSSCG00000001424	SKIV2L	99	50.125	Sus_scrofa
ENSCING00000005576	-	66	60.988	ENSTRUG00000000966	skiv2l	76	60.988	Takifugu_rubripes
ENSCING00000005576	-	99	49.616	ENSTNIG00000004382	skiv2l	93	49.614	Tetraodon_nigroviridis
ENSCING00000005576	-	94	51.038	ENSTBEG00000003462	SKIV2L	88	51.038	Tupaia_belangeri
ENSCING00000005576	-	99	47.328	ENSTTRG00000005931	SKIV2L	93	47.413	Tursiops_truncatus
ENSCING00000005576	-	99	50.843	ENSUAMG00000024336	SKIV2L	94	51.269	Ursus_americanus
ENSCING00000005576	-	99	50.974	ENSUMAG00000012666	SKIV2L	99	51.402	Ursus_maritimus
ENSCING00000005576	-	99	50.974	ENSVVUG00000022807	SKIV2L	94	51.184	Vulpes_vulpes
ENSCING00000005576	-	99	50.549	ENSXETG00000010932	skiv2l	93	50.595	Xenopus_tropicalis
ENSCING00000005576	-	99	50.818	ENSXCOG00000019517	skiv2l	91	50.818	Xiphophorus_couchianus
ENSCING00000005576	-	99	50.600	ENSXMAG00000014079	skiv2l	93	50.600	Xiphophorus_maculatus