EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005592 (Gene tree)
Gene ID: 100186450
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4952 bases
Position: chr1:6500460-6505411
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011612	GTP_EFTU	PF00009.27	3.4e-44	1	1
ENSCINP00000011612	GTP_EFTU_D3	PF03143.17	6.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011612	-	2457	-	ENSCINP00000011612	711 (aa)	-	F7BBT3

Gene Model

Click here to download ENSCING00000005592's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005592	-	99	48.527	ENSG00000112339	HBS1L	96	56.707	Homo_sapiens
ENSCING00000005592	-	72	64.000	ENSAPOG00000013169	hbs1l	63	64.000	Acanthochromis_polyacanthus
ENSCING00000005592	-	99	48.963	ENSAMEG00000009749	HBS1L	99	48.824	Ailuropoda_melanoleuca
ENSCING00000005592	-	65	61.966	ENSACIG00000017087	hbs1l	81	61.966	Amphilophus_citrinellus
ENSCING00000005592	-	99	48.276	ENSAPEG00000008320	hbs1l	99	48.966	Amphiprion_percula
ENSCING00000005592	-	99	48.148	ENSATEG00000004459	hbs1l	99	48.560	Anabas_testudineus
ENSCING00000005592	-	97	50.280	ENSAPLG00000007791	HBS1L	99	50.141	Anas_platyrhynchos
ENSCING00000005592	-	99	48.347	ENSACAG00000010120	HBS1L	99	47.856	Anolis_carolinensis
ENSCING00000005592	-	100	49.520	ENSANAG00000038076	HBS1L	99	49.656	Aotus_nancymaae
ENSCING00000005592	-	99	48.880	ENSACLG00000010469	hbs1l	99	48.880	Astatotilapia_calliptera
ENSCING00000005592	-	99	47.434	ENSAMXG00000004260	hbs1l	99	48.808	Astyanax_mexicanus
ENSCING00000005592	-	99	48.536	ENSBTAG00000020174	HBS1L	99	48.747	Bos_taurus
ENSCING00000005592	-	72	44.466	WBGene00010622	K07A12.4	82	44.466	Caenorhabditis_elegans
ENSCING00000005592	-	99	49.246	ENSCJAG00000007678	HBS1L	99	49.246	Callithrix_jacchus
ENSCING00000005592	-	99	48.204	ENSCAFG00000000226	HBS1L	99	47.784	Canis_familiaris
ENSCING00000005592	-	99	48.204	ENSCAFG00020021904	HBS1L	99	47.784	Canis_lupus_dingo
ENSCING00000005592	-	99	49.036	ENSCHIG00000010299	HBS1L	99	49.218	Capra_hircus
ENSCING00000005592	-	99	48.045	ENSTSYG00000007089	HBS1L	99	47.493	Carlito_syrichta
ENSCING00000005592	-	72	59.563	ENSCPOG00000007015	HBS1L	99	39.612	Cavia_porcellus
ENSCING00000005592	-	99	49.520	ENSCCAG00000033863	HBS1L	99	50.799	Cebus_capucinus
ENSCING00000005592	-	100	48.468	ENSCATG00000043042	HBS1L	99	48.607	Cercocebus_atys
ENSCING00000005592	-	99	47.559	ENSCLAG00000004937	HBS1L	99	48.261	Chinchilla_lanigera
ENSCING00000005592	-	100	48.468	ENSCSAG00000016791	HBS1L	99	48.472	Chlorocebus_sabaeus
ENSCING00000005592	-	51	53.186	ENSCHOG00000001852	HBS1L	55	53.186	Choloepus_hoffmanni
ENSCING00000005592	-	99	49.508	ENSCPBG00000017635	HBS1L	99	48.805	Chrysemys_picta_bellii
ENSCING00000005592	-	92	85.065	ENSCSAVG00000002297	-	100	88.321	Ciona_savignyi
ENSCING00000005592	-	100	47.772	ENSCANG00000031208	HBS1L	99	47.905	Colobus_angolensis_palliatus
ENSCING00000005592	-	99	48.821	ENSCGRG00001024531	Hbs1l	99	48.485	Cricetulus_griseus_chok1gshd
ENSCING00000005592	-	99	48.821	ENSCGRG00000017361	Hbs1l	99	48.485	Cricetulus_griseus_crigri
ENSCING00000005592	-	99	48.481	ENSCSEG00000002794	hbs1l	94	48.895	Cynoglossus_semilaevis
ENSCING00000005592	-	99	48.560	ENSCVAG00000001462	hbs1l	99	48.560	Cyprinodon_variegatus
ENSCING00000005592	-	99	47.755	ENSDARG00000036778	hbs1l	99	48.649	Danio_rerio
ENSCING00000005592	-	99	49.372	ENSDORG00000005958	Hbs1l	99	49.093	Dipodomys_ordii
ENSCING00000005592	-	99	43.811	FBgn0042712	HBS1	99	43.715	Drosophila_melanogaster
ENSCING00000005592	-	99	45.090	ENSETEG00000000913	HBS1L	99	45.090	Echinops_telfairi
ENSCING00000005592	-	99	46.573	ENSEBUG00000010759	hbs1l	99	50.894	Eptatretus_burgeri
ENSCING00000005592	-	99	47.718	ENSEASG00005011148	HBS1L	99	47.790	Equus_asinus_asinus
ENSCING00000005592	-	99	48.122	ENSECAG00000004470	HBS1L	99	47.844	Equus_caballus
ENSCING00000005592	-	99	45.315	ENSEEUG00000013582	HBS1L	89	49.191	Erinaceus_europaeus
ENSCING00000005592	-	59	57.895	ENSELUG00000006444	hbs1l	69	57.895	Esox_lucius
ENSCING00000005592	-	99	49.379	ENSFCAG00000001810	HBS1L	87	61.674	Felis_catus
ENSCING00000005592	-	85	52.273	ENSFALG00000011898	HBS1L	99	52.273	Ficedula_albicollis
ENSCING00000005592	-	99	47.448	ENSFDAG00000011841	HBS1L	99	48.257	Fukomys_damarensis
ENSCING00000005592	-	99	48.418	ENSFHEG00000006942	hbs1l	99	48.619	Fundulus_heteroclitus
ENSCING00000005592	-	99	46.953	ENSGMOG00000011843	hbs1l	99	47.230	Gadus_morhua
ENSCING00000005592	-	99	49.229	ENSGALG00000013962	HBS1L	99	48.527	Gallus_gallus
ENSCING00000005592	-	99	48.219	ENSGAFG00000004157	hbs1l	99	48.219	Gambusia_affinis
ENSCING00000005592	-	99	45.986	ENSGACG00000011035	hbs1l	99	46.939	Gasterosteus_aculeatus
ENSCING00000005592	-	99	48.409	ENSGAGG00000002033	HBS1L	99	47.671	Gopherus_agassizii
ENSCING00000005592	-	63	58.333	ENSGGOG00000034956	-	94	56.085	Gorilla_gorilla
ENSCING00000005592	-	99	48.824	ENSHBUG00000013424	hbs1l	99	48.824	Haplochromis_burtoni
ENSCING00000005592	-	99	48.050	ENSHGLG00000000516	HBS1L	99	48.050	Heterocephalus_glaber_female
ENSCING00000005592	-	99	48.050	ENSHGLG00100003550	HBS1L	99	48.050	Heterocephalus_glaber_male
ENSCING00000005592	-	99	47.808	ENSHCOG00000007581	hbs1l	93	47.808	Hippocampus_comes
ENSCING00000005592	-	99	47.172	ENSIPUG00000010748	hbs1l	99	47.339	Ictalurus_punctatus
ENSCING00000005592	-	99	47.972	ENSSTOG00000007551	HBS1L	99	47.978	Ictidomys_tridecemlineatus
ENSCING00000005592	-	99	47.368	ENSJJAG00000017024	-	97	48.061	Jaculus_jaculus
ENSCING00000005592	-	99	38.773	ENSJJAG00000012660	-	99	38.494	Jaculus_jaculus
ENSCING00000005592	-	99	48.414	ENSKMAG00000012130	hbs1l	99	48.552	Kryptolebias_marmoratus
ENSCING00000005592	-	99	47.862	ENSLBEG00000002784	hbs1l	99	48.619	Labrus_bergylta
ENSCING00000005592	-	60	60.233	ENSLACG00000004528	HBS1L	85	60.233	Latimeria_chalumnae
ENSCING00000005592	-	99	48.077	ENSLOCG00000016221	hbs1l	99	48.214	Lepisosteus_oculatus
ENSCING00000005592	-	99	47.420	ENSLAFG00000007835	HBS1L	100	46.657	Loxodonta_africana
ENSCING00000005592	-	99	48.464	ENSMFAG00000003766	HBS1L	99	48.468	Macaca_fascicularis
ENSCING00000005592	-	76	62.061	ENSMMUG00000004802	HBS1L	82	62.061	Macaca_mulatta
ENSCING00000005592	-	99	48.464	ENSMNEG00000043942	HBS1L	99	48.468	Macaca_nemestrina
ENSCING00000005592	-	100	48.468	ENSMLEG00000043218	HBS1L	98	48.468	Mandrillus_leucophaeus
ENSCING00000005592	-	99	49.113	ENSMAMG00000016498	hbs1l	99	48.767	Mastacembelus_armatus
ENSCING00000005592	-	99	48.880	ENSMZEG00005015575	hbs1l	99	48.880	Maylandia_zebra
ENSCING00000005592	-	64	63.053	ENSMZEG00005024018	-	77	63.053	Maylandia_zebra
ENSCING00000005592	-	97	49.857	ENSMGAG00000013065	HBS1L	97	48.918	Meleagris_gallopavo
ENSCING00000005592	-	99	49.376	ENSMAUG00000001077	Hbs1l	99	48.889	Mesocricetus_auratus
ENSCING00000005592	-	99	45.152	ENSMICG00000001533	-	100	45.291	Microcebus_murinus
ENSCING00000005592	-	99	41.748	ENSMICG00000030043	-	95	54.301	Microcebus_murinus
ENSCING00000005592	-	99	49.098	ENSMOCG00000023038	Hbs1l	99	48.611	Microtus_ochrogaster
ENSCING00000005592	-	97	47.467	ENSMMOG00000015507	hbs1l	99	47.612	Mola_mola
ENSCING00000005592	-	99	49.444	ENSMODG00000017499	HBS1L	99	48.889	Monodelphis_domestica
ENSCING00000005592	-	99	48.209	ENSMALG00000010768	hbs1l	99	48.281	Monopterus_albus
ENSCING00000005592	-	99	48.199	MGP_CAROLIEiJ_G0015162	Hbs1l	99	47.790	Mus_caroli
ENSCING00000005592	-	99	48.061	ENSMUSG00000019977	Hbs1l	83	64.444	Mus_musculus
ENSCING00000005592	-	99	47.658	MGP_PahariEiJ_G0023782	Hbs1l	99	47.115	Mus_pahari
ENSCING00000005592	-	99	47.724	MGP_SPRETEiJ_G0015970	Hbs1l	99	47.180	Mus_spretus
ENSCING00000005592	-	99	48.824	ENSMPUG00000014810	HBS1L	99	48.485	Mustela_putorius_furo
ENSCING00000005592	-	99	48.189	ENSMLUG00000010618	HBS1L	99	47.573	Myotis_lucifugus
ENSCING00000005592	-	99	47.639	ENSNGAG00000015184	Hbs1l	99	47.368	Nannospalax_galili
ENSCING00000005592	-	99	48.824	ENSNBRG00000020095	hbs1l	99	48.824	Neolamprologus_brichardi
ENSCING00000005592	-	99	49.174	ENSNLEG00000014721	HBS1L	99	49.174	Nomascus_leucogenys
ENSCING00000005592	-	82	53.266	ENSMEUG00000003907	HBS1L	69	53.266	Notamacropus_eugenii
ENSCING00000005592	-	57	62.712	ENSOPRG00000013595	HBS1L	51	62.712	Ochotona_princeps
ENSCING00000005592	-	99	47.157	ENSODEG00000008959	HBS1L	99	48.567	Octodon_degus
ENSCING00000005592	-	99	48.481	ENSONIG00000000460	hbs1l	99	48.481	Oreochromis_niloticus
ENSCING00000005592	-	99	49.167	ENSOANG00000002684	-	99	49.306	Ornithorhynchus_anatinus
ENSCING00000005592	-	99	46.537	ENSOCUG00000011619	HBS1L	99	46.479	Oryctolagus_cuniculus
ENSCING00000005592	-	99	47.340	ENSORLG00000016559	hbs1l	99	47.885	Oryzias_latipes
ENSCING00000005592	-	99	47.059	ENSORLG00020003827	hbs1l	99	47.880	Oryzias_latipes_hni
ENSCING00000005592	-	99	47.059	ENSORLG00015023105	hbs1l	99	47.880	Oryzias_latipes_hsok
ENSCING00000005592	-	99	48.422	ENSOMEG00000016715	hbs1l	99	48.422	Oryzias_melastigma
ENSCING00000005592	-	99	48.531	ENSOGAG00000012604	HBS1L	99	48.531	Otolemur_garnettii
ENSCING00000005592	-	99	48.117	ENSOARG00000005671	-	99	48.468	Ovis_aries
ENSCING00000005592	-	99	48.396	ENSOARG00000014798	-	99	48.747	Ovis_aries
ENSCING00000005592	-	100	48.252	ENSPPAG00000029900	HBS1L	99	48.387	Pan_paniscus
ENSCING00000005592	-	99	49.379	ENSPPRG00000005285	HBS1L	99	49.241	Panthera_pardus
ENSCING00000005592	-	99	49.379	ENSPTIG00000015803	HBS1L	99	49.241	Panthera_tigris_altaica
ENSCING00000005592	-	100	48.252	ENSPTRG00000018630	HBS1L	99	48.387	Pan_troglodytes
ENSCING00000005592	-	100	48.329	ENSPANG00000007075	HBS1L	99	48.468	Papio_anubis
ENSCING00000005592	-	99	48.815	ENSPKIG00000023171	hbs1l	99	48.599	Paramormyrops_kingsleyae
ENSCING00000005592	-	86	47.419	ENSPSIG00000016467	HBS1L	96	47.573	Pelodiscus_sinensis
ENSCING00000005592	-	99	48.247	ENSPMGG00000018051	hbs1l	96	53.684	Periophthalmus_magnuspinnatus
ENSCING00000005592	-	99	47.737	ENSPEMG00000014369	Hbs1l	99	47.253	Peromyscus_maniculatus_bairdii
ENSCING00000005592	-	99	48.087	ENSPMAG00000002516	hbs1l	99	47.874	Petromyzon_marinus
ENSCING00000005592	-	99	48.016	ENSPFOG00000021764	hbs1l	99	48.974	Poecilia_formosa
ENSCING00000005592	-	99	47.934	ENSPLAG00000006193	hbs1l	99	48.834	Poecilia_latipinna
ENSCING00000005592	-	99	49.579	ENSPMEG00000000925	hbs1l	99	49.108	Poecilia_mexicana
ENSCING00000005592	-	99	48.285	ENSPREG00000011270	hbs1l	99	48.285	Poecilia_reticulata
ENSCING00000005592	-	99	48.603	ENSPPYG00000017027	HBS1L	99	48.603	Pongo_abelii
ENSCING00000005592	-	67	59.290	ENSPCAG00000007002	HBS1L	67	59.290	Procavia_capensis
ENSCING00000005592	-	64	60.132	ENSPVAG00000015229	HBS1L	67	60.132	Pteropus_vampyrus
ENSCING00000005592	-	99	48.739	ENSPNYG00000013360	hbs1l	99	48.739	Pundamilia_nyererei
ENSCING00000005592	-	99	46.832	ENSPNAG00000026721	hbs1l	99	46.806	Pygocentrus_nattereri
ENSCING00000005592	-	99	47.361	ENSRNOG00000014531	Hbs1l	99	46.814	Rattus_norvegicus
ENSCING00000005592	-	99	48.112	ENSRBIG00000004484	HBS1L	99	48.112	Rhinopithecus_bieti
ENSCING00000005592	-	100	47.838	ENSRROG00000026176	HBS1L	99	47.972	Rhinopithecus_roxellana
ENSCING00000005592	-	60	35.730	YKR084C	-	73	35.730	Saccharomyces_cerevisiae
ENSCING00000005592	-	100	48.634	ENSSBOG00000019696	-	99	47.606	Saimiri_boliviensis_boliviensis
ENSCING00000005592	-	99	43.562	ENSSBOG00000016930	-	96	50.811	Saimiri_boliviensis_boliviensis
ENSCING00000005592	-	100	49.792	ENSSHAG00000013509	HBS1L	99	49.237	Sarcophilus_harrisii
ENSCING00000005592	-	99	48.732	ENSSFOG00015017544	hbs1l	96	48.596	Scleropages_formosus
ENSCING00000005592	-	99	48.548	ENSSMAG00000010621	hbs1l	99	48.623	Scophthalmus_maximus
ENSCING00000005592	-	99	47.940	ENSSDUG00000012974	hbs1l	99	48.072	Seriola_dumerili
ENSCING00000005592	-	99	47.802	ENSSLDG00000004960	hbs1l	99	47.940	Seriola_lalandi_dorsalis
ENSCING00000005592	-	97	48.515	ENSSARG00000006747	HBS1L	99	47.653	Sorex_araneus
ENSCING00000005592	-	99	48.194	ENSSPUG00000012389	HBS1L	99	47.141	Sphenodon_punctatus
ENSCING00000005592	-	99	47.465	ENSSSCG00000004169	HBS1L	100	46.988	Sus_scrofa
ENSCING00000005592	-	99	49.582	ENSTGUG00000011507	HBS1L	99	49.582	Taeniopygia_guttata
ENSCING00000005592	-	99	46.685	ENSTRUG00000016128	hbs1l	99	47.376	Takifugu_rubripes
ENSCING00000005592	-	99	46.779	ENSTNIG00000016320	hbs1l	99	48.039	Tetraodon_nigroviridis
ENSCING00000005592	-	86	47.903	ENSTBEG00000009950	HBS1L	88	47.903	Tupaia_belangeri
ENSCING00000005592	-	99	48.329	ENSTTRG00000003715	HBS1L	99	47.427	Tursiops_truncatus
ENSCING00000005592	-	99	49.379	ENSUAMG00000001064	HBS1L	99	49.241	Ursus_americanus
ENSCING00000005592	-	99	49.030	ENSUMAG00000024395	HBS1L	99	48.892	Ursus_maritimus
ENSCING00000005592	-	64	62.115	ENSVPAG00000006280	HBS1L	72	62.115	Vicugna_pacos
ENSCING00000005592	-	99	48.204	ENSVVUG00000000295	HBS1L	99	47.784	Vulpes_vulpes
ENSCING00000005592	-	99	47.214	ENSXETG00000003726	hbs1l	99	47.772	Xenopus_tropicalis
ENSCING00000005592	-	99	49.028	ENSXCOG00000005323	hbs1l	99	49.028	Xiphophorus_couchianus
ENSCING00000005592	-	99	48.971	ENSXMAG00000004359	hbs1l	99	48.971	Xiphophorus_maculatus