EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005595 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: exosome complex component RRP46
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2097 bases
Position: chr10:2621273-2623369
Accession: 100183725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011586	RNase_PH	PF01138.21	2.2e-21	1	1
ENSCINP00000011586	RNase_PH_C	PF03725.15	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011586	-	892	-	ENSCINP00000011586	235 (aa)	XP_002130542	A0A1W2WG08

Gene Model

Click here to download ENSCING00000005595's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005595	-	90	41.038	ENSG00000077348	EXOSC5	87	48.148	Homo_sapiens
ENSCING00000005595	-	91	38.028	ENSAPOG00000012910	exosc5	93	38.028	Acanthochromis_polyacanthus
ENSCING00000005595	-	89	40.952	ENSAMEG00000011623	EXOSC5	86	40.952	Ailuropoda_melanoleuca
ENSCING00000005595	-	96	37.004	ENSACIG00000024067	exosc5	99	37.004	Amphilophus_citrinellus
ENSCING00000005595	-	57	31.081	ENSAOCG00000005105	exosc4	59	31.081	Amphiprion_ocellaris
ENSCING00000005595	-	91	38.028	ENSAOCG00000006601	exosc5	93	38.028	Amphiprion_ocellaris
ENSCING00000005595	-	57	31.081	ENSAPEG00000003972	exosc4	59	31.081	Amphiprion_percula
ENSCING00000005595	-	91	38.028	ENSAPEG00000014199	exosc5	93	38.028	Amphiprion_percula
ENSCING00000005595	-	92	37.963	ENSATEG00000008886	exosc5	94	37.963	Anabas_testudineus
ENSCING00000005595	-	91	37.209	ENSACAG00000003784	EXOSC5	92	37.209	Anolis_carolinensis
ENSCING00000005595	-	90	30.189	ENSANAG00000022449	EXOSC5	83	30.189	Aotus_nancymaae
ENSCING00000005595	-	57	30.405	ENSACLG00000020071	exosc4	59	30.405	Astatotilapia_calliptera
ENSCING00000005595	-	92	37.963	ENSACLG00000020944	exosc5	89	37.963	Astatotilapia_calliptera
ENSCING00000005595	-	91	37.559	ENSAMXG00000034946	exosc5	93	37.559	Astyanax_mexicanus
ENSCING00000005595	-	90	41.981	ENSBTAG00000016034	EXOSC5	86	41.981	Bos_taurus
ENSCING00000005595	-	90	41.038	ENSCJAG00000020152	EXOSC5	86	41.429	Callithrix_jacchus
ENSCING00000005595	-	89	41.429	ENSCAFG00000032654	EXOSC5	86	41.429	Canis_familiaris
ENSCING00000005595	-	51	32.061	ENSCAFG00000001521	EXOSC4	53	32.061	Canis_familiaris
ENSCING00000005595	-	89	41.429	ENSCAFG00020014770	EXOSC5	86	41.429	Canis_lupus_dingo
ENSCING00000005595	-	51	32.061	ENSCAFG00020018820	EXOSC4	53	32.061	Canis_lupus_dingo
ENSCING00000005595	-	89	42.381	ENSCHIG00000026498	EXOSC5	86	42.381	Capra_hircus
ENSCING00000005595	-	51	32.824	ENSTSYG00000029697	EXOSC4	53	32.824	Carlito_syrichta
ENSCING00000005595	-	90	41.038	ENSTSYG00000014183	EXOSC5	86	41.429	Carlito_syrichta
ENSCING00000005595	-	89	41.429	ENSCPOG00000035731	EXOSC5	84	41.429	Cavia_porcellus
ENSCING00000005595	-	89	40.952	ENSCCAG00000013179	EXOSC5	86	40.952	Cebus_capucinus
ENSCING00000005595	-	90	41.509	ENSCATG00000044084	EXOSC5	86	41.905	Cercocebus_atys
ENSCING00000005595	-	89	41.905	ENSCLAG00000001186	EXOSC5	86	41.905	Chinchilla_lanigera
ENSCING00000005595	-	89	41.905	ENSCSAG00000003522	EXOSC5	77	41.905	Chlorocebus_sabaeus
ENSCING00000005595	-	89	41.429	ENSCHOG00000000047	EXOSC5	86	41.429	Choloepus_hoffmanni
ENSCING00000005595	-	51	31.343	ENSCPBG00000018860	EXOSC4	53	31.343	Chrysemys_picta_bellii
ENSCING00000005595	-	99	70.638	ENSCSAVG00000009006	-	100	70.638	Ciona_savignyi
ENSCING00000005595	-	90	41.509	ENSCANG00000039325	EXOSC5	86	41.905	Colobus_angolensis_palliatus
ENSCING00000005595	-	89	42.381	ENSCGRG00001017207	Exosc5	86	42.381	Cricetulus_griseus_chok1gshd
ENSCING00000005595	-	80	40.107	ENSCGRG00000003031	Exosc5	93	40.107	Cricetulus_griseus_crigri
ENSCING00000005595	-	92	36.574	ENSCSEG00000007190	exosc5	95	36.574	Cynoglossus_semilaevis
ENSCING00000005595	-	57	30.405	ENSCSEG00000010906	exosc4	59	30.405	Cynoglossus_semilaevis
ENSCING00000005595	-	92	38.889	ENSCVAG00000009396	exosc5	94	38.889	Cyprinodon_variegatus
ENSCING00000005595	-	57	31.081	ENSCVAG00000006625	exosc4	59	31.081	Cyprinodon_variegatus
ENSCING00000005595	-	97	37.281	ENSDARG00000040557	exosc5	99	37.281	Danio_rerio
ENSCING00000005595	-	89	40.476	ENSDNOG00000017137	EXOSC5	87	40.476	Dasypus_novemcinctus
ENSCING00000005595	-	55	31.206	ENSDNOG00000009800	EXOSC4	53	32.824	Dasypus_novemcinctus
ENSCING00000005595	-	55	31.206	ENSDORG00000008461	Exosc4	58	31.206	Dipodomys_ordii
ENSCING00000005595	-	90	41.981	ENSDORG00000003611	Exosc5	89	41.981	Dipodomys_ordii
ENSCING00000005595	-	57	32.857	FBgn0032487	Ski6	57	32.857	Drosophila_melanogaster
ENSCING00000005595	-	92	31.963	FBgn0037815	Rrp46	89	31.963	Drosophila_melanogaster
ENSCING00000005595	-	97	39.916	ENSETEG00000009358	EXOSC5	97	39.916	Echinops_telfairi
ENSCING00000005595	-	89	36.058	ENSEBUG00000000312	exosc5	88	36.058	Eptatretus_burgeri
ENSCING00000005595	-	90	41.038	ENSEASG00005006327	EXOSC5	76	41.429	Equus_asinus_asinus
ENSCING00000005595	-	90	41.509	ENSECAG00000024210	EXOSC5	86	41.509	Equus_caballus
ENSCING00000005595	-	76	42.697	ENSEEUG00000007299	EXOSC5	71	42.697	Erinaceus_europaeus
ENSCING00000005595	-	93	33.945	ENSELUG00000021719	exosc5	95	33.945	Esox_lucius
ENSCING00000005595	-	89	42.857	ENSFCAG00000033818	EXOSC5	86	42.857	Felis_catus
ENSCING00000005595	-	82	37.306	ENSFALG00000012886	EXOSC5	96	37.306	Ficedula_albicollis
ENSCING00000005595	-	55	31.206	ENSFDAG00000006708	EXOSC4	58	31.206	Fukomys_damarensis
ENSCING00000005595	-	89	41.429	ENSFDAG00000001207	EXOSC5	86	41.429	Fukomys_damarensis
ENSCING00000005595	-	57	30.405	ENSFHEG00000013533	exosc4	59	30.405	Fundulus_heteroclitus
ENSCING00000005595	-	95	37.118	ENSFHEG00000021919	exosc5	93	37.118	Fundulus_heteroclitus
ENSCING00000005595	-	91	35.681	ENSGMOG00000015865	exosc5	95	35.681	Gadus_morhua
ENSCING00000005595	-	92	37.037	ENSGAFG00000015767	exosc5	88	37.037	Gambusia_affinis
ENSCING00000005595	-	57	30.405	ENSGAFG00000021407	exosc4	59	30.405	Gambusia_affinis
ENSCING00000005595	-	91	36.620	ENSGACG00000012986	exosc5	96	36.620	Gasterosteus_aculeatus
ENSCING00000005595	-	57	31.757	ENSGACG00000017838	exosc4	58	31.757	Gasterosteus_aculeatus
ENSCING00000005595	-	68	38.994	ENSGAGG00000003166	EXOSC5	82	38.994	Gopherus_agassizii
ENSCING00000005595	-	90	41.038	ENSGGOG00000008428	EXOSC5	86	41.038	Gorilla_gorilla
ENSCING00000005595	-	57	30.405	ENSHBUG00000006605	exosc4	59	30.405	Haplochromis_burtoni
ENSCING00000005595	-	92	37.963	ENSHBUG00000010082	exosc5	89	37.963	Haplochromis_burtoni
ENSCING00000005595	-	55	31.206	ENSHGLG00000016299	EXOSC4	58	31.206	Heterocephalus_glaber_female
ENSCING00000005595	-	89	41.429	ENSHGLG00000008975	EXOSC5	86	41.429	Heterocephalus_glaber_female
ENSCING00000005595	-	89	41.905	ENSHGLG00100016097	EXOSC5	86	41.905	Heterocephalus_glaber_male
ENSCING00000005595	-	55	31.206	ENSHGLG00100018786	EXOSC4	58	31.206	Heterocephalus_glaber_male
ENSCING00000005595	-	91	35.681	ENSHCOG00000017818	exosc5	86	35.681	Hippocampus_comes
ENSCING00000005595	-	57	30.405	ENSHCOG00000018875	exosc4	56	30.405	Hippocampus_comes
ENSCING00000005595	-	91	38.028	ENSIPUG00000011820	Exosc5	94	38.028	Ictalurus_punctatus
ENSCING00000005595	-	89	42.381	ENSSTOG00000019738	EXOSC5	86	42.381	Ictidomys_tridecemlineatus
ENSCING00000005595	-	96	40.351	ENSJJAG00000013914	Exosc5	98	40.708	Jaculus_jaculus
ENSCING00000005595	-	92	37.500	ENSKMAG00000009517	exosc5	95	37.500	Kryptolebias_marmoratus
ENSCING00000005595	-	57	31.081	ENSLBEG00000012754	exosc4	59	31.081	Labrus_bergylta
ENSCING00000005595	-	92	30.093	ENSLBEG00000018216	exosc5	93	30.093	Labrus_bergylta
ENSCING00000005595	-	76	33.702	ENSLACG00000018233	EXOSC5	84	33.702	Latimeria_chalumnae
ENSCING00000005595	-	89	43.333	ENSLAFG00000013753	EXOSC5	86	43.333	Loxodonta_africana
ENSCING00000005595	-	51	32.824	ENSLAFG00000030187	EXOSC4	53	32.824	Loxodonta_africana
ENSCING00000005595	-	89	41.905	ENSMFAG00000045851	EXOSC5	77	41.905	Macaca_fascicularis
ENSCING00000005595	-	90	41.509	ENSMMUG00000014345	EXOSC5	86	41.905	Macaca_mulatta
ENSCING00000005595	-	89	41.905	ENSMNEG00000044403	EXOSC5	77	41.905	Macaca_nemestrina
ENSCING00000005595	-	90	41.509	ENSMLEG00000042915	EXOSC5	86	41.905	Mandrillus_leucophaeus
ENSCING00000005595	-	57	30.405	ENSMAMG00000014749	exosc4	59	30.405	Mastacembelus_armatus
ENSCING00000005595	-	92	37.963	ENSMAMG00000014323	exosc5	88	37.963	Mastacembelus_armatus
ENSCING00000005595	-	92	37.963	ENSMZEG00005024196	exosc5	90	37.963	Maylandia_zebra
ENSCING00000005595	-	57	30.405	ENSMZEG00005025086	exosc4	59	30.405	Maylandia_zebra
ENSCING00000005595	-	93	39.450	ENSMAUG00000010419	Exosc5	92	39.450	Mesocricetus_auratus
ENSCING00000005595	-	89	42.857	ENSMICG00000002016	EXOSC5	86	42.857	Microcebus_murinus
ENSCING00000005595	-	90	41.038	ENSMOCG00000002379	Exosc5	86	41.429	Microtus_ochrogaster
ENSCING00000005595	-	92	37.963	ENSMMOG00000004799	exosc5	88	37.963	Mola_mola
ENSCING00000005595	-	57	31.757	ENSMMOG00000016779	exosc4	59	31.757	Mola_mola
ENSCING00000005595	-	55	30.496	ENSMODG00000010435	EXOSC4	66	30.496	Monodelphis_domestica
ENSCING00000005595	-	89	41.905	ENSMODG00000008642	EXOSC5	85	41.905	Monodelphis_domestica
ENSCING00000005595	-	92	37.037	ENSMALG00000009453	exosc5	94	37.037	Monopterus_albus
ENSCING00000005595	-	55	31.206	MGP_CAROLIEiJ_G0019919	Exosc4	58	31.206	Mus_caroli
ENSCING00000005595	-	89	42.381	MGP_CAROLIEiJ_G0029376	Exosc5	86	42.381	Mus_caroli
ENSCING00000005595	-	89	42.381	ENSMUSG00000061286	Exosc5	86	42.381	Mus_musculus
ENSCING00000005595	-	55	31.206	ENSMUSG00000034259	Exosc4	58	31.206	Mus_musculus
ENSCING00000005595	-	89	42.381	MGP_PahariEiJ_G0021229	Exosc5	86	42.381	Mus_pahari
ENSCING00000005595	-	89	42.381	MGP_SPRETEiJ_G0030472	Exosc5	86	42.381	Mus_spretus
ENSCING00000005595	-	55	31.206	MGP_SPRETEiJ_G0020822	Exosc4	58	31.206	Mus_spretus
ENSCING00000005595	-	89	41.429	ENSMPUG00000017649	EXOSC5	86	41.429	Mustela_putorius_furo
ENSCING00000005595	-	90	41.981	ENSMLUG00000013104	EXOSC5	86	42.381	Myotis_lucifugus
ENSCING00000005595	-	89	41.429	ENSNGAG00000005929	Exosc5	86	41.429	Nannospalax_galili
ENSCING00000005595	-	92	37.963	ENSNBRG00000004340	exosc5	95	37.963	Neolamprologus_brichardi
ENSCING00000005595	-	57	30.405	ENSNBRG00000012326	exosc4	59	30.405	Neolamprologus_brichardi
ENSCING00000005595	-	90	41.038	ENSNLEG00000013696	EXOSC5	86	41.429	Nomascus_leucogenys
ENSCING00000005595	-	66	48.980	ENSMEUG00000010485	EXOSC5	67	48.980	Notamacropus_eugenii
ENSCING00000005595	-	57	30.405	ENSONIG00000009617	exosc4	59	30.405	Oreochromis_niloticus
ENSCING00000005595	-	92	37.963	ENSONIG00000004023	exosc5	89	37.963	Oreochromis_niloticus
ENSCING00000005595	-	51	31.343	ENSOANG00000014904	EXOSC4	53	31.343	Ornithorhynchus_anatinus
ENSCING00000005595	-	89	43.333	ENSOCUG00000011497	EXOSC5	86	43.333	Oryctolagus_cuniculus
ENSCING00000005595	-	55	31.206	ENSOCUG00000021243	EXOSC4	58	31.206	Oryctolagus_cuniculus
ENSCING00000005595	-	92	37.963	ENSORLG00000023035	exosc5	95	37.963	Oryzias_latipes
ENSCING00000005595	-	92	37.500	ENSORLG00020017279	exosc5	95	37.500	Oryzias_latipes_hni
ENSCING00000005595	-	92	37.037	ENSORLG00015001719	exosc5	95	37.037	Oryzias_latipes_hsok
ENSCING00000005595	-	90	37.441	ENSOMEG00000021763	exosc5	92	37.441	Oryzias_melastigma
ENSCING00000005595	-	89	42.381	ENSOGAG00000016075	EXOSC5	86	42.381	Otolemur_garnettii
ENSCING00000005595	-	51	31.579	ENSOARG00000015188	EXOSC4	54	31.579	Ovis_aries
ENSCING00000005595	-	89	42.381	ENSOARG00000007412	EXOSC5	86	42.381	Ovis_aries
ENSCING00000005595	-	90	41.509	ENSPPAG00000024210	EXOSC5	86	41.509	Pan_paniscus
ENSCING00000005595	-	89	43.333	ENSPPRG00000003713	EXOSC5	86	43.333	Panthera_pardus
ENSCING00000005595	-	89	43.333	ENSPTIG00000015884	EXOSC5	86	43.333	Panthera_tigris_altaica
ENSCING00000005595	-	90	41.509	ENSPTRG00000011024	EXOSC5	86	41.509	Pan_troglodytes
ENSCING00000005595	-	90	41.509	ENSPANG00000004945	EXOSC5	86	41.905	Papio_anubis
ENSCING00000005595	-	92	37.037	ENSPKIG00000013092	exosc5	90	37.037	Paramormyrops_kingsleyae
ENSCING00000005595	-	92	37.963	ENSPMGG00000015323	exosc5	93	37.963	Periophthalmus_magnuspinnatus
ENSCING00000005595	-	57	30.405	ENSPMGG00000019307	exosc4	59	30.405	Periophthalmus_magnuspinnatus
ENSCING00000005595	-	90	41.038	ENSPEMG00000018589	Exosc5	86	41.429	Peromyscus_maniculatus_bairdii
ENSCING00000005595	-	55	31.206	ENSPMAG00000001175	exosc4	58	31.206	Petromyzon_marinus
ENSCING00000005595	-	90	42.453	ENSPCIG00000016745	EXOSC5	91	42.453	Phascolarctos_cinereus
ENSCING00000005595	-	92	37.327	ENSPFOG00000014158	exosc5	95	37.327	Poecilia_formosa
ENSCING00000005595	-	57	30.405	ENSPFOG00000015214	exosc4	59	30.405	Poecilia_formosa
ENSCING00000005595	-	92	37.963	ENSPLAG00000005701	exosc5	80	37.963	Poecilia_latipinna
ENSCING00000005595	-	57	30.405	ENSPLAG00000018751	exosc4	59	30.405	Poecilia_latipinna
ENSCING00000005595	-	92	37.963	ENSPMEG00000020815	exosc5	90	37.900	Poecilia_mexicana
ENSCING00000005595	-	57	30.405	ENSPMEG00000023116	exosc4	59	30.405	Poecilia_mexicana
ENSCING00000005595	-	95	36.245	ENSPREG00000017723	exosc5	93	36.245	Poecilia_reticulata
ENSCING00000005595	-	82	40.625	ENSPPYG00000010016	-	97	40.838	Pongo_abelii
ENSCING00000005595	-	90	37.736	ENSPCAG00000005946	EXOSC5	86	37.736	Procavia_capensis
ENSCING00000005595	-	55	31.206	ENSPCOG00000020992	EXOSC4	58	31.206	Propithecus_coquereli
ENSCING00000005595	-	89	41.905	ENSPCOG00000020582	EXOSC5	86	41.905	Propithecus_coquereli
ENSCING00000005595	-	57	30.405	ENSPNYG00000014429	exosc4	59	30.405	Pundamilia_nyererei
ENSCING00000005595	-	92	37.963	ENSPNYG00000007712	exosc5	89	37.963	Pundamilia_nyererei
ENSCING00000005595	-	91	37.559	ENSPNAG00000030099	exosc5	94	37.559	Pygocentrus_nattereri
ENSCING00000005595	-	89	41.905	ENSRNOG00000020635	Exosc5	86	41.905	Rattus_norvegicus
ENSCING00000005595	-	89	42.381	ENSRBIG00000040585	EXOSC5	77	42.381	Rhinopithecus_bieti
ENSCING00000005595	-	89	41.905	ENSRROG00000044020	EXOSC5	77	41.905	Rhinopithecus_roxellana
ENSCING00000005595	-	65	45.752	ENSSBOG00000031753	EXOSC5	83	37.143	Saimiri_boliviensis_boliviensis
ENSCING00000005595	-	92	36.574	ENSSFOG00015022999	exosc5	92	36.574	Scleropages_formosus
ENSCING00000005595	-	57	31.690	ENSSFOG00015011830	exosc6	59	31.884	Scleropages_formosus
ENSCING00000005595	-	57	30.405	ENSSMAG00000020020	exosc4	59	30.405	Scophthalmus_maximus
ENSCING00000005595	-	92	38.889	ENSSMAG00000020240	exosc5	86	38.889	Scophthalmus_maximus
ENSCING00000005595	-	92	37.963	ENSSDUG00000000339	exosc5	80	37.963	Seriola_dumerili
ENSCING00000005595	-	57	30.405	ENSSDUG00000018966	exosc4	59	30.405	Seriola_dumerili
ENSCING00000005595	-	57	30.405	ENSSLDG00000008003	exosc4	59	30.405	Seriola_lalandi_dorsalis
ENSCING00000005595	-	92	37.963	ENSSLDG00000005218	exosc5	80	37.963	Seriola_lalandi_dorsalis
ENSCING00000005595	-	90	32.075	ENSSARG00000010083	-	86	32.381	Sorex_araneus
ENSCING00000005595	-	95	38.496	ENSSPAG00000018306	exosc5	99	38.496	Stegastes_partitus
ENSCING00000005595	-	76	44.382	ENSSSCG00000003015	EXOSC5	98	34.615	Sus_scrofa
ENSCING00000005595	-	81	36.126	ENSTGUG00000014136	EXOSC5	93	36.126	Taeniopygia_guttata
ENSCING00000005595	-	57	31.081	ENSTRUG00000025054	exosc4	59	31.081	Takifugu_rubripes
ENSCING00000005595	-	91	36.744	ENSTRUG00000009689	exosc5	94	36.744	Takifugu_rubripes
ENSCING00000005595	-	91	34.545	ENSTNIG00000000238	exosc5	94	34.545	Tetraodon_nigroviridis
ENSCING00000005595	-	57	30.405	ENSTNIG00000008519	exosc4	59	30.405	Tetraodon_nigroviridis
ENSCING00000005595	-	89	42.381	ENSTBEG00000007203	EXOSC5	98	42.381	Tupaia_belangeri
ENSCING00000005595	-	89	42.381	ENSTTRG00000012863	EXOSC5	86	42.381	Tursiops_truncatus
ENSCING00000005595	-	90	33.019	ENSUAMG00000010104	EXOSC5	83	33.333	Ursus_americanus
ENSCING00000005595	-	76	44.382	ENSUMAG00000005660	EXOSC5	76	44.382	Ursus_maritimus
ENSCING00000005595	-	89	41.429	ENSVVUG00000005320	EXOSC5	86	41.429	Vulpes_vulpes
ENSCING00000005595	-	51	32.061	ENSVVUG00000009675	EXOSC4	53	32.061	Vulpes_vulpes
ENSCING00000005595	-	91	37.089	ENSXETG00000018752	exosc5	90	37.089	Xenopus_tropicalis
ENSCING00000005595	-	92	37.963	ENSXCOG00000012487	exosc5	88	37.963	Xiphophorus_couchianus
ENSCING00000005595	-	57	30.405	ENSXCOG00000015017	exosc4	59	30.405	Xiphophorus_couchianus
ENSCING00000005595	-	57	30.405	ENSXMAG00000016287	exosc4	59	30.405	Xiphophorus_maculatus
ENSCING00000005595	-	94	37.557	ENSXMAG00000004786	exosc5	71	37.557	Xiphophorus_maculatus