EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005665 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1965 bases
Position: chr8:5151259-5153223
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011728	DUF382	PF04037.13	6.5e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011728	-	1881	-	ENSCINP00000011728	626 (aa)	-	F6Y1N2

Gene Model

Click here to download ENSCING00000005665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005665	-	99	60.063	ENSG00000087365	SF3B2	99	68.025	Homo_sapiens
ENSCING00000005665	-	81	68.047	ENSAPOG00000001974	sf3b2	71	60.252	Acanthochromis_polyacanthus
ENSCING00000005665	-	99	60.126	ENSAMEG00000017206	SF3B2	72	60.184	Ailuropoda_melanoleuca
ENSCING00000005665	-	100	58.986	ENSACIG00000000624	sf3b2	75	59.293	Amphilophus_citrinellus
ENSCING00000005665	-	100	59.542	ENSAOCG00000009207	sf3b2	75	60.666	Amphiprion_ocellaris
ENSCING00000005665	-	100	60.153	ENSAPEG00000002762	sf3b2	75	61.187	Amphiprion_percula
ENSCING00000005665	-	99	51.314	ENSACAG00000008615	SF3B2	73	50.453	Anolis_carolinensis
ENSCING00000005665	-	99	60.063	ENSANAG00000029120	SF3B2	73	60.429	Aotus_nancymaae
ENSCING00000005665	-	100	58.589	ENSACLG00000014771	sf3b2	62	67.871	Astatotilapia_calliptera
ENSCING00000005665	-	83	68.069	ENSAMXG00000007929	sf3b2	86	61.600	Astyanax_mexicanus
ENSCING00000005665	-	99	59.906	ENSBTAG00000002778	SF3B2	72	59.293	Bos_taurus
ENSCING00000005665	-	87	50.177	WBGene00021004	sftb-2	87	51.509	Caenorhabditis_elegans
ENSCING00000005665	-	99	60.063	ENSCJAG00000001656	SF3B2	73	60.429	Callithrix_jacchus
ENSCING00000005665	-	99	59.906	ENSCAFG00000013033	SF3B2	72	60.061	Canis_familiaris
ENSCING00000005665	-	99	59.906	ENSCAFG00020015382	SF3B2	72	60.061	Canis_lupus_dingo
ENSCING00000005665	-	99	59.906	ENSCHIG00000011211	SF3B2	72	59.293	Capra_hircus
ENSCING00000005665	-	99	59.591	ENSTSYG00000000959	SF3B2	74	59.140	Carlito_syrichta
ENSCING00000005665	-	59	67.797	ENSCAPG00000006065	SF3B2	67	67.797	Cavia_aperea
ENSCING00000005665	-	85	60.036	ENSCPOG00000008294	SF3B2	71	59.503	Cavia_porcellus
ENSCING00000005665	-	99	60.063	ENSCCAG00000035256	SF3B2	73	60.429	Cebus_capucinus
ENSCING00000005665	-	99	60.063	ENSCATG00000042240	SF3B2	74	60.429	Cercocebus_atys
ENSCING00000005665	-	99	60.063	ENSCLAG00000016852	SF3B2	74	59.447	Chinchilla_lanigera
ENSCING00000005665	-	99	60.063	ENSCSAG00000008121	SF3B2	72	60.429	Chlorocebus_sabaeus
ENSCING00000005665	-	72	68.199	ENSCHOG00000001476	SF3B2	51	69.498	Choloepus_hoffmanni
ENSCING00000005665	-	99	61.417	ENSCPBG00000022465	SF3B2	73	67.925	Chrysemys_picta_bellii
ENSCING00000005665	-	99	85.646	ENSCSAVG00000002029	-	100	86.146	Ciona_savignyi
ENSCING00000005665	-	99	60.063	ENSCANG00000039680	SF3B2	74	60.429	Colobus_angolensis_palliatus
ENSCING00000005665	-	99	60.377	ENSCGRG00001015741	Sf3b2	74	59.754	Cricetulus_griseus_chok1gshd
ENSCING00000005665	-	99	60.377	ENSCGRG00000018110	Sf3b2	76	59.754	Cricetulus_griseus_crigri
ENSCING00000005665	-	83	66.730	ENSCSEG00000000230	sf3b2	81	59.907	Cynoglossus_semilaevis
ENSCING00000005665	-	84	66.856	ENSCVAG00000003357	sf3b2	62	67.742	Cyprinodon_variegatus
ENSCING00000005665	-	100	59.815	ENSDARG00000018049	sf3b2	76	60.876	Danio_rerio
ENSCING00000005665	-	99	60.063	ENSDNOG00000009484	SF3B2	81	59.356	Dasypus_novemcinctus
ENSCING00000005665	-	99	59.126	ENSDORG00000002495	Sf3b2	73	59.447	Dipodomys_ordii
ENSCING00000005665	-	83	67.416	ENSEBUG00000013703	sf3b2	74	58.590	Eptatretus_burgeri
ENSCING00000005665	-	99	60.377	ENSEASG00005004508	SF3B2	72	60.429	Equus_asinus_asinus
ENSCING00000005665	-	99	60.377	ENSECAG00000024461	SF3B2	72	60.429	Equus_caballus
ENSCING00000005665	-	99	61.859	ENSELUG00000005586	sf3b2	74	62.679	Esox_lucius
ENSCING00000005665	-	99	60.220	ENSFCAG00000013289	SF3B2	74	60.276	Felis_catus
ENSCING00000005665	-	86	62.295	ENSFALG00000014653	SF3B2	75	63.947	Ficedula_albicollis
ENSCING00000005665	-	99	60.188	ENSFDAG00000019806	SF3B2	73	59.877	Fukomys_damarensis
ENSCING00000005665	-	84	67.297	ENSFHEG00000020968	sf3b2	61	67.932	Fundulus_heteroclitus
ENSCING00000005665	-	99	61.429	ENSGMOG00000012131	sf3b2	97	62.124	Gadus_morhua
ENSCING00000005665	-	84	67.864	ENSGAFG00000001675	sf3b2	61	68.880	Gambusia_affinis
ENSCING00000005665	-	84	66.792	ENSGACG00000019012	sf3b2	99	59.361	Gasterosteus_aculeatus
ENSCING00000005665	-	99	61.224	ENSGAGG00000023916	SF3B2	75	60.829	Gopherus_agassizii
ENSCING00000005665	-	99	60.063	ENSGGOG00000028448	SF3B2	70	69.188	Gorilla_gorilla
ENSCING00000005665	-	100	59.380	ENSHBUG00000017349	sf3b2	74	59.750	Haplochromis_burtoni
ENSCING00000005665	-	99	60.063	ENSHGLG00000010807	SF3B2	74	59.447	Heterocephalus_glaber_female
ENSCING00000005665	-	99	60.063	ENSHGLG00100006361	SF3B2	74	59.447	Heterocephalus_glaber_male
ENSCING00000005665	-	100	59.070	ENSHCOG00000016203	sf3b2	76	59.690	Hippocampus_comes
ENSCING00000005665	-	84	66.667	ENSIPUG00000009383	sf3b2	74	60.490	Ictalurus_punctatus
ENSCING00000005665	-	99	58.970	ENSSTOG00000028892	SF3B2	74	59.447	Ictidomys_tridecemlineatus
ENSCING00000005665	-	99	60.063	ENSJJAG00000018193	Sf3b2	73	59.447	Jaculus_jaculus
ENSCING00000005665	-	84	66.541	ENSKMAG00000020181	sf3b2	61	66.920	Kryptolebias_marmoratus
ENSCING00000005665	-	100	60.790	ENSLBEG00000027739	sf3b2	74	69.011	Labrus_bergylta
ENSCING00000005665	-	87	65.288	ENSLACG00000010429	SF3B2	72	60.276	Latimeria_chalumnae
ENSCING00000005665	-	99	60.220	ENSLAFG00000002128	SF3B2	74	59.908	Loxodonta_africana
ENSCING00000005665	-	99	59.969	ENSMFAG00000003064	SF3B2	74	60.337	Macaca_fascicularis
ENSCING00000005665	-	99	56.289	ENSMMUG00000011743	SF3B2	74	56.748	Macaca_mulatta
ENSCING00000005665	-	99	60.063	ENSMNEG00000034437	SF3B2	74	60.429	Macaca_nemestrina
ENSCING00000005665	-	99	59.906	ENSMLEG00000029373	SF3B2	74	60.276	Mandrillus_leucophaeus
ENSCING00000005665	-	85	67.290	ENSMAMG00000014103	sf3b2	75	60.731	Mastacembelus_armatus
ENSCING00000005665	-	84	67.552	ENSMZEG00005020789	sf3b2	61	67.871	Maylandia_zebra
ENSCING00000005665	-	59	66.755	ENSMAUG00000017040	Sf3b2	67	67.553	Mesocricetus_auratus
ENSCING00000005665	-	99	59.494	ENSMICG00000016942	-	74	60.095	Microcebus_murinus
ENSCING00000005665	-	99	60.535	ENSMICG00000008565	-	74	60.276	Microcebus_murinus
ENSCING00000005665	-	99	60.220	ENSMOCG00000003136	Sf3b2	74	59.754	Microtus_ochrogaster
ENSCING00000005665	-	100	58.860	ENSMMOG00000012928	sf3b2	74	59.505	Mola_mola
ENSCING00000005665	-	99	57.590	ENSMODG00000025020	-	83	64.340	Monodelphis_domestica
ENSCING00000005665	-	84	66.792	ENSMODG00000008490	-	80	60.061	Monodelphis_domestica
ENSCING00000005665	-	100	58.282	ENSMALG00000015137	sf3b2	62	67.300	Monopterus_albus
ENSCING00000005665	-	99	60.535	MGP_CAROLIEiJ_G0022539	Sf3b2	74	59.908	Mus_caroli
ENSCING00000005665	-	99	60.220	ENSMUSG00000024853	Sf3b2	74	59.601	Mus_musculus
ENSCING00000005665	-	99	60.220	MGP_PahariEiJ_G0014036	Sf3b2	74	59.754	Mus_pahari
ENSCING00000005665	-	99	60.220	MGP_SPRETEiJ_G0023453	Sf3b2	73	59.568	Mus_spretus
ENSCING00000005665	-	99	59.906	ENSMPUG00000011349	SF3B2	72	60.061	Mustela_putorius_furo
ENSCING00000005665	-	99	60.535	ENSMLUG00000011136	SF3B2	72	60.276	Myotis_lucifugus
ENSCING00000005665	-	99	60.063	ENSNGAG00000012103	Sf3b2	74	59.447	Nannospalax_galili
ENSCING00000005665	-	99	57.829	ENSNLEG00000006007	SF3B2	74	57.489	Nomascus_leucogenys
ENSCING00000005665	-	87	64.607	ENSMEUG00000000019	SF3B2	53	64.607	Notamacropus_eugenii
ENSCING00000005665	-	99	57.256	ENSODEG00000017764	SF3B2	73	56.923	Octodon_degus
ENSCING00000005665	-	84	67.424	ENSONIG00000013068	sf3b2	62	67.547	Oreochromis_niloticus
ENSCING00000005665	-	71	69.778	ENSOANG00000012482	SF3B2	65	63.851	Ornithorhynchus_anatinus
ENSCING00000005665	-	67	40.758	ENSOCUG00000024154	-	79	41.958	Oryctolagus_cuniculus
ENSCING00000005665	-	99	58.851	ENSOCUG00000015722	-	76	60.061	Oryctolagus_cuniculus
ENSCING00000005665	-	100	59.014	ENSORLG00000008235	sf3b2	61	67.932	Oryzias_latipes
ENSCING00000005665	-	100	59.014	ENSORLG00020005357	sf3b2	63	67.932	Oryzias_latipes_hni
ENSCING00000005665	-	100	59.014	ENSORLG00015022454	sf3b2	74	67.932	Oryzias_latipes_hsok
ENSCING00000005665	-	85	66.168	ENSOMEG00000017480	sf3b2	63	67.420	Oryzias_melastigma
ENSCING00000005665	-	85	66.543	ENSOGAG00000005799	SF3B2	59	67.730	Otolemur_garnettii
ENSCING00000005665	-	99	59.906	ENSOARG00000002125	SF3B2	88	59.754	Ovis_aries
ENSCING00000005665	-	99	60.063	ENSPPAG00000007359	SF3B2	73	60.429	Pan_paniscus
ENSCING00000005665	-	99	60.220	ENSPPRG00000013334	SF3B2	74	60.276	Panthera_pardus
ENSCING00000005665	-	99	60.220	ENSPTIG00000015022	SF3B2	74	60.276	Panthera_tigris_altaica
ENSCING00000005665	-	99	60.063	ENSPTRG00000003912	SF3B2	73	60.429	Pan_troglodytes
ENSCING00000005665	-	99	60.063	ENSPANG00000008593	SF3B2	74	60.429	Papio_anubis
ENSCING00000005665	-	99	61.661	ENSPKIG00000016576	sf3b2	87	62.780	Paramormyrops_kingsleyae
ENSCING00000005665	-	99	62.480	ENSPSIG00000003158	SF3B2	85	61.883	Pelodiscus_sinensis
ENSCING00000005665	-	88	62.545	ENSPMGG00000000819	sf3b2	65	63.129	Periophthalmus_magnuspinnatus
ENSCING00000005665	-	99	60.220	ENSPEMG00000015437	Sf3b2	74	59.601	Peromyscus_maniculatus_bairdii
ENSCING00000005665	-	99	55.625	ENSPEMG00000015451	-	80	55.349	Peromyscus_maniculatus_bairdii
ENSCING00000005665	-	85	66.234	ENSPCIG00000008381	SF3B2	76	60.122	Phascolarctos_cinereus
ENSCING00000005665	-	84	67.424	ENSPFOG00000002552	sf3b2	61	67.978	Poecilia_formosa
ENSCING00000005665	-	84	67.864	ENSPLAG00000001471	sf3b2	61	68.311	Poecilia_latipinna
ENSCING00000005665	-	84	67.358	ENSPMEG00000013180	sf3b2	61	68.311	Poecilia_mexicana
ENSCING00000005665	-	84	67.803	ENSPREG00000002665	sf3b2	61	68.190	Poecilia_reticulata
ENSCING00000005665	-	62	57.389	ENSPPYG00000003034	-	61	59.223	Pongo_abelii
ENSCING00000005665	-	99	61.164	ENSPCAG00000005129	SF3B2	72	60.736	Procavia_capensis
ENSCING00000005665	-	99	60.692	ENSPCOG00000025375	SF3B2	74	60.276	Propithecus_coquereli
ENSCING00000005665	-	84	67.355	ENSPNYG00000023594	sf3b2	88	59.237	Pundamilia_nyererei
ENSCING00000005665	-	83	67.358	ENSPNAG00000001891	sf3b2	73	60.429	Pygocentrus_nattereri
ENSCING00000005665	-	99	60.063	ENSRNOG00000020412	Sf3b2	74	59.509	Rattus_norvegicus
ENSCING00000005665	-	99	60.063	ENSRBIG00000034065	SF3B2	74	60.583	Rhinopithecus_bieti
ENSCING00000005665	-	99	60.063	ENSRROG00000034496	SF3B2	74	60.583	Rhinopithecus_roxellana
ENSCING00000005665	-	99	60.063	ENSSBOG00000026337	SF3B2	73	60.429	Saimiri_boliviensis_boliviensis
ENSCING00000005665	-	85	60.185	ENSSHAG00000018043	-	64	60.338	Sarcophilus_harrisii
ENSCING00000005665	-	99	57.098	ENSSHAG00000010933	-	72	57.781	Sarcophilus_harrisii
ENSCING00000005665	-	99	60.443	ENSSFOG00015021125	sf3b2	71	61.076	Scleropages_formosus
ENSCING00000005665	-	83	67.304	ENSSMAG00000004079	sf3b2	77	60.308	Scophthalmus_maximus
ENSCING00000005665	-	83	67.878	ENSSDUG00000008499	sf3b2	65	66.485	Seriola_dumerili
ENSCING00000005665	-	83	67.878	ENSSLDG00000006838	sf3b2	62	66.425	Seriola_lalandi_dorsalis
ENSCING00000005665	-	84	67.481	ENSSPUG00000009198	SF3B2	61	68.550	Sphenodon_punctatus
ENSCING00000005665	-	84	67.803	ENSSPAG00000004406	sf3b2	60	67.093	Stegastes_partitus
ENSCING00000005665	-	99	60.063	ENSSSCG00000012957	SF3B2	72	60.429	Sus_scrofa
ENSCING00000005665	-	98	55.859	ENSTRUG00000007611	sf3b2	88	56.320	Takifugu_rubripes
ENSCING00000005665	-	84	65.465	ENSTNIG00000007441	sf3b2	64	65.524	Tetraodon_nigroviridis
ENSCING00000005665	-	99	54.936	ENSTBEG00000004258	SF3B2	65	60.682	Tupaia_belangeri
ENSCING00000005665	-	99	59.906	ENSTTRG00000014339	SF3B2	72	59.356	Tursiops_truncatus
ENSCING00000005665	-	95	60.685	ENSUAMG00000020754	SF3B2	69	60.315	Ursus_americanus
ENSCING00000005665	-	99	60.220	ENSUMAG00000010994	SF3B2	72	60.276	Ursus_maritimus
ENSCING00000005665	-	99	59.906	ENSVVUG00000027029	SF3B2	72	60.061	Vulpes_vulpes
ENSCING00000005665	-	99	59.660	ENSXETG00000008422	sf3b2	67	68.620	Xenopus_tropicalis
ENSCING00000005665	-	84	67.864	ENSXCOG00000008943	sf3b2	75	68.691	Xiphophorus_couchianus
ENSCING00000005665	-	84	67.864	ENSXMAG00000008467	sf3b2	61	68.691	Xiphophorus_maculatus