EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005698 (Gene tree)
Gene ID: 100183191
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1994 bases
Position: chr3:2840272-2842265
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011772	Ribosomal_S5_C	PF03719.15	1e-21	1	1
ENSCINP00000011772	Ribosomal_S5	PF00333.20	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011772	-	1260	-	ENSCINP00000011772	385 (aa)	-	F6WQI3

Gene Model

Click here to download ENSCING00000005698's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005698	-	75	41.391	ENSG00000144029	MRPS5	73	41.772	Homo_sapiens
ENSCING00000005698	-	79	40.575	ENSAPOG00000006057	mrps5	75	40.575	Acanthochromis_polyacanthus
ENSCING00000005698	-	84	38.953	ENSAMEG00000009757	MRPS5	80	40.115	Ailuropoda_melanoleuca
ENSCING00000005698	-	79	39.048	ENSACIG00000011594	mrps5	76	39.048	Amphilophus_citrinellus
ENSCING00000005698	-	76	41.914	ENSAPEG00000000853	mrps5	77	40.895	Amphiprion_percula
ENSCING00000005698	-	76	40.594	ENSATEG00000012264	mrps5	84	37.719	Anabas_testudineus
ENSCING00000005698	-	82	38.485	ENSAPLG00000002557	MRPS5	85	38.485	Anas_platyrhynchos
ENSCING00000005698	-	84	38.462	ENSACAG00000000830	MRPS5	83	38.462	Anolis_carolinensis
ENSCING00000005698	-	78	41.424	ENSANAG00000030230	MRPS5	73	41.083	Aotus_nancymaae
ENSCING00000005698	-	67	36.604	ENSACLG00000025759	mrps5	76	36.242	Astatotilapia_calliptera
ENSCING00000005698	-	76	39.869	ENSAMXG00000033743	mrps5	79	41.176	Astyanax_mexicanus
ENSCING00000005698	-	84	38.757	ENSBTAG00000008241	MRPS5	78	39.941	Bos_taurus
ENSCING00000005698	-	75	35.897	WBGene00008452	mrps-5	70	35.897	Caenorhabditis_elegans
ENSCING00000005698	-	79	41.401	ENSCJAG00000018942	MRPS5	73	41.401	Callithrix_jacchus
ENSCING00000005698	-	84	38.596	ENSCAFG00000007040	MRPS5	79	39.766	Canis_familiaris
ENSCING00000005698	-	84	38.596	ENSCAFG00020019650	MRPS5	79	39.766	Canis_lupus_dingo
ENSCING00000005698	-	91	38.211	ENSCHIG00000020942	MRPS5	85	39.295	Capra_hircus
ENSCING00000005698	-	82	39.275	ENSTSYG00000001808	MRPS5	78	40.179	Carlito_syrichta
ENSCING00000005698	-	79	40.938	ENSCAPG00000016441	MRPS5	74	41.956	Cavia_aperea
ENSCING00000005698	-	79	41.956	ENSCPOG00000004405	MRPS5	73	41.956	Cavia_porcellus
ENSCING00000005698	-	79	41.083	ENSCCAG00000026269	MRPS5	73	41.083	Cebus_capucinus
ENSCING00000005698	-	79	40.312	ENSCATG00000031215	MRPS5	78	40.708	Cercocebus_atys
ENSCING00000005698	-	79	41.379	ENSCLAG00000006224	MRPS5	73	42.405	Chinchilla_lanigera
ENSCING00000005698	-	79	40.694	ENSCSAG00000017411	MRPS5	62	40.694	Chlorocebus_sabaeus
ENSCING00000005698	-	83	37.048	ENSCPBG00000018258	MRPS5	85	38.253	Chrysemys_picta_bellii
ENSCING00000005698	-	79	34.194	ENSCANG00000042096	-	76	35.484	Colobus_angolensis_palliatus
ENSCING00000005698	-	79	41.640	ENSCANG00000042646	MRPS5	76	41.640	Colobus_angolensis_palliatus
ENSCING00000005698	-	75	38.944	ENSCGRG00001019558	Mrps5	76	39.403	Cricetulus_griseus_chok1gshd
ENSCING00000005698	-	75	38.944	ENSCGRG00000006508	Mrps5	76	39.403	Cricetulus_griseus_crigri
ENSCING00000005698	-	76	40.065	ENSCSEG00000000495	mrps5	75	40.065	Cynoglossus_semilaevis
ENSCING00000005698	-	71	39.007	ENSCVAG00000015403	mrps5	87	39.007	Cyprinodon_variegatus
ENSCING00000005698	-	82	39.640	ENSDARG00000062209	mrps5	83	39.640	Danio_rerio
ENSCING00000005698	-	67	43.173	ENSDNOG00000007247	MRPS5	62	44.649	Dasypus_novemcinctus
ENSCING00000005698	-	79	40.764	ENSDORG00000001493	Mrps5	73	41.720	Dipodomys_ordii
ENSCING00000005698	-	83	35.736	FBgn0044510	mRpS5	81	35.736	Drosophila_melanogaster
ENSCING00000005698	-	52	38.571	ENSEBUG00000013756	mrps5	64	38.571	Eptatretus_burgeri
ENSCING00000005698	-	84	38.889	ENSEASG00005005278	MRPS5	80	39.481	Equus_asinus_asinus
ENSCING00000005698	-	84	38.596	ENSECAG00000001234	MRPS5	80	39.193	Equus_caballus
ENSCING00000005698	-	83	34.897	ENSEEUG00000011502	MRPS5	80	35.549	Erinaceus_europaeus
ENSCING00000005698	-	79	39.873	ENSELUG00000003664	mrps5	83	39.412	Esox_lucius
ENSCING00000005698	-	80	38.941	ENSFCAG00000009358	MRPS5	69	39.255	Felis_catus
ENSCING00000005698	-	76	38.361	ENSFALG00000002327	MRPS5	85	37.822	Ficedula_albicollis
ENSCING00000005698	-	78	40.705	ENSFDAG00000004115	MRPS5	73	41.325	Fukomys_damarensis
ENSCING00000005698	-	75	39.799	ENSFHEG00000007507	mrps5	81	39.799	Fundulus_heteroclitus
ENSCING00000005698	-	59	35.865	ENSGMOG00000008049	mrps5	92	35.865	Gadus_morhua
ENSCING00000005698	-	78	37.778	ENSGALG00000008550	MRPS5	77	39.812	Gallus_gallus
ENSCING00000005698	-	76	40.924	ENSGAFG00000012707	mrps5	75	40.924	Gambusia_affinis
ENSCING00000005698	-	62	38.462	ENSGACG00000000216	mrps5	83	38.462	Gasterosteus_aculeatus
ENSCING00000005698	-	69	38.267	ENSGAGG00000005665	MRPS5	80	39.711	Gopherus_agassizii
ENSCING00000005698	-	77	31.046	ENSGGOG00000022731	-	77	32.362	Gorilla_gorilla
ENSCING00000005698	-	79	39.873	ENSGGOG00000001750	MRPS5	73	41.139	Gorilla_gorilla
ENSCING00000005698	-	79	34.161	ENSHBUG00000006687	mrps5	87	33.526	Haplochromis_burtoni
ENSCING00000005698	-	85	39.316	ENSHGLG00000016278	MRPS5	80	40.171	Heterocephalus_glaber_female
ENSCING00000005698	-	85	39.316	ENSHGLG00100013743	MRPS5	80	40.171	Heterocephalus_glaber_male
ENSCING00000005698	-	67	39.405	ENSHCOG00000014200	mrps5	79	39.405	Hippocampus_comes
ENSCING00000005698	-	83	39.329	ENSIPUG00000018395	mrps5	64	41.275	Ictalurus_punctatus
ENSCING00000005698	-	78	39.744	ENSJJAG00000022513	Mrps5	76	40.379	Jaculus_jaculus
ENSCING00000005698	-	81	41.176	ENSKMAG00000016581	mrps5	80	41.176	Kryptolebias_marmoratus
ENSCING00000005698	-	78	37.700	ENSLBEG00000007499	mrps5	69	37.342	Labrus_bergylta
ENSCING00000005698	-	56	36.842	ENSLOCG00000015618	mrps5	78	36.842	Lepisosteus_oculatus
ENSCING00000005698	-	78	41.424	ENSMFAG00000043526	MRPS5	73	41.139	Macaca_fascicularis
ENSCING00000005698	-	78	36.246	ENSMFAG00000002850	-	82	34.731	Macaca_fascicularis
ENSCING00000005698	-	78	37.778	ENSMMUG00000003033	-	78	37.778	Macaca_mulatta
ENSCING00000005698	-	51	37.056	ENSMMUG00000029361	-	69	31.392	Macaca_mulatta
ENSCING00000005698	-	78	36.977	ENSMNEG00000029316	-	82	35.417	Macaca_nemestrina
ENSCING00000005698	-	78	36.508	ENSMNEG00000028934	-	72	37.143	Macaca_nemestrina
ENSCING00000005698	-	78	41.424	ENSMNEG00000041571	-	73	41.139	Macaca_nemestrina
ENSCING00000005698	-	85	35.000	ENSMLEG00000006829	-	86	35.000	Mandrillus_leucophaeus
ENSCING00000005698	-	79	40.312	ENSMLEG00000032039	MRPS5	64	41.640	Mandrillus_leucophaeus
ENSCING00000005698	-	78	39.677	ENSMAMG00000022074	mrps5	78	39.677	Mastacembelus_armatus
ENSCING00000005698	-	67	36.604	ENSMZEG00005020014	mrps5	76	36.242	Maylandia_zebra
ENSCING00000005698	-	78	38.462	ENSMGAG00000007201	MRPS5	91	39.355	Meleagris_gallopavo
ENSCING00000005698	-	75	38.944	ENSMAUG00000002765	Mrps5	77	39.169	Mesocricetus_auratus
ENSCING00000005698	-	75	38.796	ENSMICG00000007318	-	83	38.796	Microcebus_murinus
ENSCING00000005698	-	79	36.306	ENSMICG00000046753	-	72	36.306	Microcebus_murinus
ENSCING00000005698	-	75	40.264	ENSMOCG00000001710	Mrps5	73	41.640	Microtus_ochrogaster
ENSCING00000005698	-	76	35.948	ENSMMOG00000007366	mrps5	79	35.329	Mola_mola
ENSCING00000005698	-	78	40.952	ENSMODG00000007235	MRPS5	81	41.640	Monodelphis_domestica
ENSCING00000005698	-	81	36.741	ENSMALG00000020388	mrps5	77	36.741	Monopterus_albus
ENSCING00000005698	-	75	41.667	MGP_CAROLIEiJ_G0024262	Mrps5	72	42.357	Mus_caroli
ENSCING00000005698	-	75	41.667	ENSMUSG00000027374	Mrps5	72	42.357	Mus_musculus
ENSCING00000005698	-	75	41.667	MGP_SPRETEiJ_G0025182	Mrps5	72	42.357	Mus_spretus
ENSCING00000005698	-	84	38.261	ENSMPUG00000009170	MRPS5	81	38.857	Mustela_putorius_furo
ENSCING00000005698	-	78	39.490	ENSMLUG00000003183	MRPS5	74	40.439	Myotis_lucifugus
ENSCING00000005698	-	82	37.838	ENSNGAG00000013050	Mrps5	80	38.329	Nannospalax_galili
ENSCING00000005698	-	86	38.261	ENSNLEG00000000002	MRPS5	80	39.130	Nomascus_leucogenys
ENSCING00000005698	-	53	31.553	ENSMEUG00000013751	-	65	31.553	Notamacropus_eugenii
ENSCING00000005698	-	80	40.312	ENSOPRG00000005079	MRPS5	77	41.562	Ochotona_princeps
ENSCING00000005698	-	79	41.640	ENSODEG00000006937	MRPS5	78	42.587	Octodon_degus
ENSCING00000005698	-	79	38.339	ENSONIG00000001150	mrps5	77	38.339	Oreochromis_niloticus
ENSCING00000005698	-	79	40.764	ENSOCUG00000003547	MRPS5	73	42.038	Oryctolagus_cuniculus
ENSCING00000005698	-	85	38.872	ENSORLG00020014512	mrps5	82	38.872	Oryzias_latipes_hni
ENSCING00000005698	-	85	37.685	ENSORLG00015019956	mrps5	82	38.576	Oryzias_latipes_hsok
ENSCING00000005698	-	82	40.061	ENSOMEG00000013610	mrps5	77	39.169	Oryzias_melastigma
ENSCING00000005698	-	79	41.009	ENSOGAG00000031363	MRPS5	72	42.271	Otolemur_garnettii
ENSCING00000005698	-	82	39.940	ENSOARG00000014191	MRPS5	79	40.828	Ovis_aries
ENSCING00000005698	-	79	40.506	ENSPPAG00000039966	MRPS5	73	41.772	Pan_paniscus
ENSCING00000005698	-	86	32.945	ENSPPAG00000015080	-	77	32.362	Pan_paniscus
ENSCING00000005698	-	85	38.150	ENSPPRG00000004724	MRPS5	80	38.682	Panthera_pardus
ENSCING00000005698	-	79	39.252	ENSPTIG00000011824	MRPS5	75	39.815	Panthera_tigris_altaica
ENSCING00000005698	-	86	32.945	ENSPTRG00000048267	-	77	32.362	Pan_troglodytes
ENSCING00000005698	-	79	40.506	ENSPTRG00000012209	MRPS5	73	41.772	Pan_troglodytes
ENSCING00000005698	-	78	42.308	ENSPANG00000022839	MRPS5	73	41.693	Papio_anubis
ENSCING00000005698	-	83	35.736	ENSPANG00000032455	-	82	35.417	Papio_anubis
ENSCING00000005698	-	83	37.910	ENSPKIG00000022123	mrps5	84	37.910	Paramormyrops_kingsleyae
ENSCING00000005698	-	78	40.063	ENSPSIG00000004820	MRPS5	87	40.615	Pelodiscus_sinensis
ENSCING00000005698	-	78	40.129	ENSPMGG00000003674	mrps5	82	40.129	Periophthalmus_magnuspinnatus
ENSCING00000005698	-	77	38.907	ENSPEMG00000012667	Mrps5	74	40.308	Peromyscus_maniculatus_bairdii
ENSCING00000005698	-	68	41.026	ENSPMAG00000007465	mrps5	95	41.026	Petromyzon_marinus
ENSCING00000005698	-	78	41.100	ENSPCIG00000003207	-	72	40.764	Phascolarctos_cinereus
ENSCING00000005698	-	76	39.934	ENSPFOG00000006753	mrps5	75	39.934	Poecilia_formosa
ENSCING00000005698	-	76	39.934	ENSPLAG00000015964	mrps5	75	39.934	Poecilia_latipinna
ENSCING00000005698	-	76	39.934	ENSPMEG00000023362	mrps5	75	39.934	Poecilia_mexicana
ENSCING00000005698	-	76	39.934	ENSPREG00000001722	mrps5	75	39.934	Poecilia_reticulata
ENSCING00000005698	-	78	39.365	ENSPPYG00000012051	MRPS5	72	40.635	Pongo_abelii
ENSCING00000005698	-	78	42.071	ENSPCOG00000026442	MRPS5	78	41.009	Propithecus_coquereli
ENSCING00000005698	-	78	40.645	ENSPVAG00000006094	MRPS5	73	41.270	Pteropus_vampyrus
ENSCING00000005698	-	85	37.982	ENSPNYG00000009861	mrps5	83	37.982	Pundamilia_nyererei
ENSCING00000005698	-	76	39.216	ENSPNAG00000011574	mrps5	77	38.037	Pygocentrus_nattereri
ENSCING00000005698	-	75	42.333	ENSRNOG00000015192	Mrps5	72	43.312	Rattus_norvegicus
ENSCING00000005698	-	79	42.271	ENSRROG00000037350	MRPS5	73	42.271	Rhinopithecus_roxellana
ENSCING00000005698	-	89	31.445	ENSRROG00000036340	-	79	33.433	Rhinopithecus_roxellana
ENSCING00000005698	-	78	41.424	ENSSBOG00000021540	MRPS5	73	41.083	Saimiri_boliviensis_boliviensis
ENSCING00000005698	-	85	37.607	ENSSHAG00000012969	MRPS5	80	39.080	Sarcophilus_harrisii
ENSCING00000005698	-	92	36.436	ENSSFOG00015006898	mrps5	93	36.436	Scleropages_formosus
ENSCING00000005698	-	82	38.226	ENSSMAG00000019624	mrps5	81	38.226	Scophthalmus_maximus
ENSCING00000005698	-	83	36.842	ENSSDUG00000019792	mrps5	90	36.842	Seriola_dumerili
ENSCING00000005698	-	79	37.778	ENSSLDG00000016726	mrps5	77	37.778	Seriola_lalandi_dorsalis
ENSCING00000005698	-	67	38.806	ENSSPUG00000018881	MRPS5	88	39.355	Sphenodon_punctatus
ENSCING00000005698	-	79	38.658	ENSSPAG00000021042	mrps5	80	38.390	Stegastes_partitus
ENSCING00000005698	-	84	37.283	ENSSSCG00000008113	MRPS5	80	37.931	Sus_scrofa
ENSCING00000005698	-	76	37.582	ENSTGUG00000002166	MRPS5	87	38.485	Taeniopygia_guttata
ENSCING00000005698	-	78	36.392	ENSTBEG00000013607	MRPS5	82	37.342	Tupaia_belangeri
ENSCING00000005698	-	78	41.479	ENSTTRG00000004963	MRPS5	77	41.139	Tursiops_truncatus
ENSCING00000005698	-	74	38.562	ENSUAMG00000011086	MRPS5	78	39.869	Ursus_americanus
ENSCING00000005698	-	85	38.968	ENSUMAG00000012079	MRPS5	80	39.828	Ursus_maritimus
ENSCING00000005698	-	79	40.125	ENSVPAG00000003674	MRPS5	78	41.121	Vicugna_pacos
ENSCING00000005698	-	84	38.889	ENSVVUG00000027421	MRPS5	80	40.058	Vulpes_vulpes
ENSCING00000005698	-	81	40.867	ENSXETG00000022440	mrps5	90	40.867	Xenopus_tropicalis
ENSCING00000005698	-	76	38.944	ENSXCOG00000000561	mrps5	78	38.944	Xiphophorus_couchianus
ENSCING00000005698	-	76	40.264	ENSXMAG00000028833	mrps5	75	40.264	Xiphophorus_maculatus