EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005713 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1107 bases
Position: chrHT000114.1:40988-42094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	1	6
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	2	6
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	3	6
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	4	6
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	5	6
ENSCINP00000011790	zf-C2H2	PF00096.26	3.9e-33	6	6
ENSCINP00000011790	zf-met	PF12874.7	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011790	-	1107	-	ENSCINP00000011790	369 (aa)	-	F6WPJ4

Gene Model

Click here to download ENSCING00000005713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005713	-	69	32.432	ENSACIG00000017166	-	55	32.432	Amphilophus_citrinellus
ENSCING00000005713	-	67	38.525	ENSAOCG00000018579	-	79	38.525	Amphiprion_ocellaris
ENSCING00000005713	-	69	32.370	ENSAPEG00000019755	-	86	32.370	Amphiprion_percula
ENSCING00000005713	-	72	32.766	ENSAPEG00000007889	-	75	32.766	Amphiprion_percula
ENSCING00000005713	-	69	30.435	WBGene00021374	Y37E11B.1	92	30.435	Caenorhabditis_elegans
ENSCING00000005713	-	69	30.120	ENSCING00000003384	-	92	30.120	Ciona_intestinalis
ENSCING00000005713	-	82	35.971	ENSCSAVG00000009574	-	100	35.971	Ciona_savignyi
ENSCING00000005713	-	71	32.857	ENSCSAVG00000005896	-	68	32.857	Ciona_savignyi
ENSCING00000005713	-	68	32.836	ENSCSAVG00000006729	-	68	33.088	Ciona_savignyi
ENSCING00000005713	-	68	35.135	ENSCSAVG00000003895	-	100	35.135	Ciona_savignyi
ENSCING00000005713	-	79	33.562	ENSCSEG00000005491	-	78	33.562	Cynoglossus_semilaevis
ENSCING00000005713	-	61	30.556	ENSCVAG00000002502	-	93	32.530	Cyprinodon_variegatus
ENSCING00000005713	-	80	32.432	ENSCVAG00000016098	-	99	32.432	Cyprinodon_variegatus
ENSCING00000005713	-	69	31.092	ENSCVAG00000019574	-	88	31.092	Cyprinodon_variegatus
ENSCING00000005713	-	89	35.036	ENSCVAG00000002295	-	88	35.036	Cyprinodon_variegatus
ENSCING00000005713	-	67	32.298	FBgn0030012	CG18262	53	32.298	Drosophila_melanogaster
ENSCING00000005713	-	69	35.238	FBgn0028895	CG17328	54	35.238	Drosophila_melanogaster
ENSCING00000005713	-	75	39.496	ENSEBUG00000000735	-	99	39.496	Eptatretus_burgeri
ENSCING00000005713	-	70	38.767	ENSEBUG00000015522	-	68	38.767	Eptatretus_burgeri
ENSCING00000005713	-	69	39.759	ENSEBUG00000004841	-	79	39.759	Eptatretus_burgeri
ENSCING00000005713	-	70	38.462	ENSEBUG00000008392	-	76	37.500	Eptatretus_burgeri
ENSCING00000005713	-	93	42.000	ENSELUG00000020794	-	65	31.944	Esox_lucius
ENSCING00000005713	-	81	33.755	ENSFHEG00000003596	-	73	33.755	Fundulus_heteroclitus
ENSCING00000005713	-	92	32.404	ENSFHEG00000020889	-	74	35.135	Fundulus_heteroclitus
ENSCING00000005713	-	95	34.940	ENSFHEG00000013644	-	90	38.095	Fundulus_heteroclitus
ENSCING00000005713	-	82	35.000	ENSFHEG00000012990	-	94	35.000	Fundulus_heteroclitus
ENSCING00000005713	-	69	33.028	ENSGACG00000018415	-	100	35.948	Gasterosteus_aculeatus
ENSCING00000005713	-	76	33.831	ENSHCOG00000014881	-	72	33.831	Hippocampus_comes
ENSCING00000005713	-	68	34.842	ENSHCOG00000017437	-	71	34.842	Hippocampus_comes
ENSCING00000005713	-	91	35.165	ENSHCOG00000014891	-	56	35.165	Hippocampus_comes
ENSCING00000005713	-	77	39.759	ENSKMAG00000012909	-	91	39.759	Kryptolebias_marmoratus
ENSCING00000005713	-	77	33.133	ENSKMAG00000007658	-	83	33.133	Kryptolebias_marmoratus
ENSCING00000005713	-	67	32.558	ENSMMOG00000001961	-	96	32.558	Mola_mola
ENSCING00000005713	-	72	33.588	ENSONIG00000003224	-	99	33.588	Oreochromis_niloticus
ENSCING00000005713	-	69	35.556	ENSONIG00000007812	-	99	34.800	Oreochromis_niloticus
ENSCING00000005713	-	85	34.661	ENSONIG00000016416	-	98	34.661	Oreochromis_niloticus
ENSCING00000005713	-	69	30.539	ENSONIG00000009894	-	96	30.539	Oreochromis_niloticus
ENSCING00000005713	-	78	33.824	ENSONIG00000003471	-	98	40.000	Oreochromis_niloticus
ENSCING00000005713	-	69	37.931	ENSORLG00015018254	-	89	37.931	Oryzias_latipes_hsok
ENSCING00000005713	-	68	33.918	ENSOMEG00000017673	-	68	33.918	Oryzias_melastigma
ENSCING00000005713	-	72	31.760	ENSPMGG00000010563	-	74	31.760	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	68	31.792	ENSPMGG00000019842	-	68	31.792	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	80	34.337	ENSPMGG00000010664	-	97	34.337	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	69	30.952	ENSPMGG00000012289	-	70	30.952	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	80	34.109	ENSPMGG00000000458	-	95	33.740	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	69	32.031	ENSPMGG00000000218	-	60	31.955	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	68	37.349	ENSPMGG00000000489	-	76	37.349	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	92	37.736	ENSPMGG00000022524	-	95	32.114	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	73	33.036	ENSPMGG00000000243	-	76	33.036	Periophthalmus_magnuspinnatus
ENSCING00000005713	-	73	33.088	ENSPMAG00000007983	-	98	31.228	Petromyzon_marinus
ENSCING00000005713	-	69	35.294	ENSPFOG00000020691	-	82	30.256	Poecilia_formosa
ENSCING00000005713	-	70	36.000	ENSPFOG00000002879	-	100	36.000	Poecilia_formosa
ENSCING00000005713	-	88	35.270	ENSPLAG00000006174	-	76	34.677	Poecilia_latipinna
ENSCING00000005713	-	86	35.088	ENSPLAG00000011254	-	83	35.088	Poecilia_latipinna
ENSCING00000005713	-	89	35.366	ENSPMEG00000022676	-	99	35.246	Poecilia_mexicana
ENSCING00000005713	-	68	36.585	ENSPMEG00000007503	-	58	36.585	Poecilia_mexicana
ENSCING00000005713	-	86	31.200	ENSPMEG00000019229	-	73	31.200	Poecilia_mexicana
ENSCING00000005713	-	73	37.089	ENSPREG00000016204	-	64	37.089	Poecilia_reticulata
ENSCING00000005713	-	69	37.209	ENSPREG00000007146	-	67	31.200	Poecilia_reticulata
ENSCING00000005713	-	73	32.609	ENSPREG00000015352	-	65	32.609	Poecilia_reticulata
ENSCING00000005713	-	93	30.729	ENSPNAG00000025211	-	74	30.729	Pygocentrus_nattereri
ENSCING00000005713	-	69	35.294	ENSSMAG00000000404	-	50	35.294	Scophthalmus_maximus
ENSCING00000005713	-	82	32.995	ENSSDUG00000000946	-	100	35.983	Seriola_dumerili
ENSCING00000005713	-	82	34.667	ENSSLDG00000000464	-	65	36.842	Seriola_lalandi_dorsalis
ENSCING00000005713	-	89	31.481	ENSSLDG00000002515	-	88	31.481	Seriola_lalandi_dorsalis
ENSCING00000005713	-	69	33.813	ENSSPAG00000009405	-	51	33.813	Stegastes_partitus
ENSCING00000005713	-	92	32.039	ENSXCOG00000005697	-	96	32.039	Xiphophorus_couchianus