EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005753 (Gene tree)
Gene ID: 101242304
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3190 bases
Position: chr14:1838739-1841928
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000011874	MRP-S28	PF10213.9	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000011874	-	810	-	ENSCINP00000011874	270 (aa)	-	F6PZ15

Gene Model

Click here to download ENSCING00000005753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005753	-	100	42.308	ENSAPOG00000008300	mrps35	82	42.308	Acanthochromis_polyacanthus
ENSCING00000005753	-	96	47.080	ENSAMEG00000011553	MRPS35	81	47.080	Ailuropoda_melanoleuca
ENSCING00000005753	-	96	43.066	ENSACIG00000018701	mrps35	82	42.308	Amphilophus_citrinellus
ENSCING00000005753	-	96	42.336	ENSAOCG00000006741	mrps35	81	42.336	Amphiprion_ocellaris
ENSCING00000005753	-	96	42.336	ENSAPEG00000007022	mrps35	78	42.336	Amphiprion_percula
ENSCING00000005753	-	99	43.657	ENSATEG00000019646	mrps35	83	43.657	Anabas_testudineus
ENSCING00000005753	-	94	49.259	ENSAPLG00000013383	MRPS35	96	49.259	Anas_platyrhynchos
ENSCING00000005753	-	56	52.000	ENSACAG00000004291	-	68	52.000	Anolis_carolinensis
ENSCING00000005753	-	76	52.451	ENSANAG00000025188	MRPS35	70	52.451	Aotus_nancymaae
ENSCING00000005753	-	100	41.958	ENSACLG00000026388	mrps35	82	41.958	Astatotilapia_calliptera
ENSCING00000005753	-	96	46.512	ENSAMXG00000015124	mrps35	68	46.512	Astyanax_mexicanus
ENSCING00000005753	-	96	46.350	ENSBTAG00000006369	MRPS35	81	46.350	Bos_taurus
ENSCING00000005753	-	96	47.080	ENSCJAG00000043200	MRPS35	81	47.080	Callithrix_jacchus
ENSCING00000005753	-	96	47.080	ENSCAFG00000010963	MRPS35	81	47.080	Canis_familiaris
ENSCING00000005753	-	96	47.080	ENSCAFG00020013510	MRPS35	81	47.080	Canis_lupus_dingo
ENSCING00000005753	-	96	45.985	ENSCHIG00000025620	-	81	45.985	Capra_hircus
ENSCING00000005753	-	89	48.031	ENSCHIG00000016426	-	78	48.031	Capra_hircus
ENSCING00000005753	-	86	46.371	ENSTSYG00000003293	MRPS35	77	46.371	Carlito_syrichta
ENSCING00000005753	-	100	42.606	ENSCPOG00000010714	MRPS35	95	42.606	Cavia_porcellus
ENSCING00000005753	-	96	46.715	ENSCCAG00000026788	MRPS35	81	46.715	Cebus_capucinus
ENSCING00000005753	-	96	45.255	ENSCATG00000019666	MRPS35	81	45.255	Cercocebus_atys
ENSCING00000005753	-	96	45.255	ENSCLAG00000000691	MRPS35	81	45.255	Chinchilla_lanigera
ENSCING00000005753	-	96	45.255	ENSCSAG00000007584	MRPS35	99	45.255	Chlorocebus_sabaeus
ENSCING00000005753	-	100	45.614	ENSCPBG00000000621	MRPS35	78	45.614	Chrysemys_picta_bellii
ENSCING00000005753	-	100	74.444	ENSCSAVG00000009395	-	84	74.444	Ciona_savignyi
ENSCING00000005753	-	96	45.620	ENSCANG00000028913	MRPS35	81	45.620	Colobus_angolensis_palliatus
ENSCING00000005753	-	96	46.970	ENSCGRG00001019645	Mrps35	82	46.970	Cricetulus_griseus_chok1gshd
ENSCING00000005753	-	96	46.591	ENSCGRG00000005952	Mrps35	92	46.591	Cricetulus_griseus_crigri
ENSCING00000005753	-	96	42.909	ENSCSEG00000009276	mrps35	79	42.909	Cynoglossus_semilaevis
ENSCING00000005753	-	95	44.747	ENSCVAG00000000647	mrps35	73	44.747	Cyprinodon_variegatus
ENSCING00000005753	-	100	42.143	ENSDARG00000038456	mrps35	81	42.143	Danio_rerio
ENSCING00000005753	-	96	46.715	ENSDNOG00000003068	MRPS35	80	46.715	Dasypus_novemcinctus
ENSCING00000005753	-	96	45.620	ENSDORG00000003486	Mrps35	91	45.620	Dipodomys_ordii
ENSCING00000005753	-	96	43.396	FBgn0035374	mRpS35	78	43.396	Drosophila_melanogaster
ENSCING00000005753	-	93	48.496	ENSETEG00000005034	MRPS35	78	48.496	Echinops_telfairi
ENSCING00000005753	-	79	48.182	ENSEBUG00000006842	mrps35	95	48.182	Eptatretus_burgeri
ENSCING00000005753	-	96	47.619	ENSEASG00005006645	MRPS35	80	47.619	Equus_asinus_asinus
ENSCING00000005753	-	96	47.619	ENSECAG00000010929	MRPS35	80	47.619	Equus_caballus
ENSCING00000005753	-	100	40.288	ENSEEUG00000008229	MRPS35	85	40.288	Erinaceus_europaeus
ENSCING00000005753	-	96	43.431	ENSELUG00000008083	mrps35	78	43.431	Esox_lucius
ENSCING00000005753	-	96	45.985	ENSFCAG00000029524	MRPS35	81	47.080	Felis_catus
ENSCING00000005753	-	96	46.715	ENSFALG00000004625	MRPS35	99	47.080	Ficedula_albicollis
ENSCING00000005753	-	100	44.912	ENSFDAG00000007336	MRPS35	95	44.912	Fukomys_damarensis
ENSCING00000005753	-	94	45.174	ENSFHEG00000002470	mrps35	70	45.174	Fundulus_heteroclitus
ENSCING00000005753	-	94	45.357	ENSGMOG00000004718	mrps35	82	45.357	Gadus_morhua
ENSCING00000005753	-	96	47.445	ENSGALG00000036730	MRPS35	67	47.445	Gallus_gallus
ENSCING00000005753	-	96	41.455	ENSGAFG00000003842	mrps35	79	41.455	Gambusia_affinis
ENSCING00000005753	-	96	43.478	ENSGACG00000003757	mrps35	79	43.478	Gasterosteus_aculeatus
ENSCING00000005753	-	94	46.468	ENSGAGG00000017587	MRPS35	75	46.468	Gopherus_agassizii
ENSCING00000005753	-	96	44.526	ENSGGOG00000003193	MRPS35	81	44.526	Gorilla_gorilla
ENSCING00000005753	-	100	40.909	ENSHBUG00000014651	mrps35	82	40.909	Haplochromis_burtoni
ENSCING00000005753	-	96	39.927	ENSHGLG00000015265	-	78	39.927	Heterocephalus_glaber_female
ENSCING00000005753	-	93	43.071	ENSHGLG00000020219	-	78	43.071	Heterocephalus_glaber_female
ENSCING00000005753	-	96	36.861	ENSHGLG00000009273	-	80	36.861	Heterocephalus_glaber_female
ENSCING00000005753	-	96	44.689	ENSHGLG00000001828	-	82	44.689	Heterocephalus_glaber_female
ENSCING00000005753	-	96	44.689	ENSHGLG00100011411	-	82	44.689	Heterocephalus_glaber_male
ENSCING00000005753	-	96	43.223	ENSHGLG00100002513	-	82	43.223	Heterocephalus_glaber_male
ENSCING00000005753	-	94	42.697	ENSHCOG00000004614	mrps35	77	42.697	Hippocampus_comes
ENSCING00000005753	-	100	43.706	ENSIPUG00000011432	mrps35	82	43.706	Ictalurus_punctatus
ENSCING00000005753	-	96	39.338	ENSSTOG00000011940	-	85	39.338	Ictidomys_tridecemlineatus
ENSCING00000005753	-	96	41.971	ENSJJAG00000010633	Mrps35	91	41.971	Jaculus_jaculus
ENSCING00000005753	-	96	43.431	ENSKMAG00000017026	mrps35	79	43.431	Kryptolebias_marmoratus
ENSCING00000005753	-	96	42.491	ENSLBEG00000022639	mrps35	79	42.491	Labrus_bergylta
ENSCING00000005753	-	96	45.788	ENSLOCG00000016692	mrps35	78	45.788	Lepisosteus_oculatus
ENSCING00000005753	-	96	47.080	ENSLAFG00000010490	MRPS35	96	47.080	Loxodonta_africana
ENSCING00000005753	-	96	45.255	ENSMFAG00000030289	MRPS35	81	45.255	Macaca_fascicularis
ENSCING00000005753	-	96	44.891	ENSMMUG00000047645	MRPS35	81	44.891	Macaca_mulatta
ENSCING00000005753	-	96	45.255	ENSMNEG00000043409	MRPS35	81	45.255	Macaca_nemestrina
ENSCING00000005753	-	96	45.620	ENSMLEG00000014861	MRPS35	81	45.620	Mandrillus_leucophaeus
ENSCING00000005753	-	96	44.161	ENSMAMG00000023147	mrps35	78	44.161	Mastacembelus_armatus
ENSCING00000005753	-	100	41.608	ENSMZEG00005010120	mrps35	82	41.608	Maylandia_zebra
ENSCING00000005753	-	96	46.715	ENSMGAG00000013862	MRPS35	96	46.715	Meleagris_gallopavo
ENSCING00000005753	-	96	45.255	ENSMICG00000017686	-	82	45.255	Microcebus_murinus
ENSCING00000005753	-	96	43.431	ENSMICG00000032618	-	80	43.431	Microcebus_murinus
ENSCING00000005753	-	96	46.154	ENSMOCG00000000925	Mrps35	82	46.154	Microtus_ochrogaster
ENSCING00000005753	-	95	46.304	ENSMMOG00000001035	mrps35	77	46.304	Mola_mola
ENSCING00000005753	-	96	44.526	ENSMODG00000014424	MRPS35	68	44.526	Monodelphis_domestica
ENSCING00000005753	-	96	43.431	ENSMALG00000013767	mrps35	79	43.431	Monopterus_albus
ENSCING00000005753	-	94	44.981	MGP_CAROLIEiJ_G0029064	Mrps35	81	44.981	Mus_caroli
ENSCING00000005753	-	94	44.981	ENSMUSG00000040112	Mrps35	81	44.981	Mus_musculus
ENSCING00000005753	-	94	44.981	MGP_SPRETEiJ_G0030119	Mrps35	81	44.981	Mus_spretus
ENSCING00000005753	-	96	41.241	ENSMPUG00000005878	-	80	41.241	Mustela_putorius_furo
ENSCING00000005753	-	96	46.520	ENSMLUG00000003279	MRPS35	80	46.520	Myotis_lucifugus
ENSCING00000005753	-	94	46.947	ENSNGAG00000000169	Mrps35	88	46.947	Nannospalax_galili
ENSCING00000005753	-	100	40.909	ENSNBRG00000018774	mrps35	82	40.909	Neolamprologus_brichardi
ENSCING00000005753	-	96	43.796	ENSNLEG00000036292	MRPS35	81	43.796	Nomascus_leucogenys
ENSCING00000005753	-	79	43.363	ENSOPRG00000007903	MRPS35	66	43.363	Ochotona_princeps
ENSCING00000005753	-	96	45.788	ENSODEG00000006203	MRPS35	90	45.788	Octodon_degus
ENSCING00000005753	-	100	41.259	ENSONIG00000008827	mrps35	82	41.259	Oreochromis_niloticus
ENSCING00000005753	-	94	47.266	ENSOANG00000010504	MRPS35	81	47.266	Ornithorhynchus_anatinus
ENSCING00000005753	-	96	45.421	ENSOCUG00000016214	MRPS35	80	45.421	Oryctolagus_cuniculus
ENSCING00000005753	-	100	43.972	ENSORLG00000024981	mrps35	81	43.972	Oryzias_latipes
ENSCING00000005753	-	96	45.018	ENSORLG00020019856	mrps35	77	45.018	Oryzias_latipes_hni
ENSCING00000005753	-	100	44.326	ENSORLG00015012791	mrps35	81	44.326	Oryzias_latipes_hsok
ENSCING00000005753	-	94	44.074	ENSOMEG00000007741	mrps35	84	44.074	Oryzias_melastigma
ENSCING00000005753	-	96	45.985	ENSOGAG00000010630	MRPS35	81	45.985	Otolemur_garnettii
ENSCING00000005753	-	96	45.985	ENSOARG00000019704	MRPS35	81	45.985	Ovis_aries
ENSCING00000005753	-	96	44.526	ENSPPAG00000024107	-	81	44.526	Pan_paniscus
ENSCING00000005753	-	96	44.526	ENSPPAG00000008983	-	81	44.526	Pan_paniscus
ENSCING00000005753	-	96	45.985	ENSPPRG00000022747	MRPS35	81	47.080	Panthera_pardus
ENSCING00000005753	-	96	45.255	ENSPTIG00000016892	MRPS35	92	45.614	Panthera_tigris_altaica
ENSCING00000005753	-	96	44.526	ENSPTRG00000004792	MRPS35	81	44.526	Pan_troglodytes
ENSCING00000005753	-	96	44.891	ENSPANG00000004580	MRPS35	81	44.891	Papio_anubis
ENSCING00000005753	-	98	44.086	ENSPKIG00000007441	mrps35	91	44.086	Paramormyrops_kingsleyae
ENSCING00000005753	-	96	48.679	ENSPSIG00000006351	MRPS35	96	48.679	Pelodiscus_sinensis
ENSCING00000005753	-	96	42.336	ENSPMGG00000005809	mrps35	75	44.358	Periophthalmus_magnuspinnatus
ENSCING00000005753	-	96	46.154	ENSPEMG00000005515	Mrps35	82	46.154	Peromyscus_maniculatus_bairdii
ENSCING00000005753	-	96	45.055	ENSPCIG00000008273	-	80	45.055	Phascolarctos_cinereus
ENSCING00000005753	-	84	37.991	ENSPCIG00000016492	-	60	37.991	Phascolarctos_cinereus
ENSCING00000005753	-	96	46.512	ENSPFOG00000012166	mrps35	72	46.512	Poecilia_formosa
ENSCING00000005753	-	95	46.693	ENSPLAG00000005985	mrps35	72	46.693	Poecilia_latipinna
ENSCING00000005753	-	95	46.693	ENSPMEG00000015699	mrps35	73	46.693	Poecilia_mexicana
ENSCING00000005753	-	96	42.701	ENSPREG00000019306	mrps35	79	42.701	Poecilia_reticulata
ENSCING00000005753	-	66	50.562	ENSPPYG00000004383	-	73	50.562	Pongo_abelii
ENSCING00000005753	-	100	46.316	ENSPCAG00000004150	MRPS35	84	46.316	Procavia_capensis
ENSCING00000005753	-	96	40.146	ENSPVAG00000016544	MRPS35	81	40.146	Pteropus_vampyrus
ENSCING00000005753	-	100	41.259	ENSPNYG00000007276	mrps35	82	41.259	Pundamilia_nyererei
ENSCING00000005753	-	100	44.251	ENSPNAG00000024495	mrps35	76	48.148	Pygocentrus_nattereri
ENSCING00000005753	-	94	45.725	ENSRNOG00000001842	Mrps35	81	45.725	Rattus_norvegicus
ENSCING00000005753	-	76	50.980	ENSRBIG00000027610	MRPS35	60	50.980	Rhinopithecus_bieti
ENSCING00000005753	-	96	44.891	ENSRROG00000042830	MRPS35	81	44.891	Rhinopithecus_roxellana
ENSCING00000005753	-	96	46.350	ENSSBOG00000031588	MRPS35	85	46.350	Saimiri_boliviensis_boliviensis
ENSCING00000005753	-	100	43.986	ENSSFOG00015002462	mrps35	84	43.986	Scleropages_formosus
ENSCING00000005753	-	96	40.364	ENSSMAG00000006888	mrps35	72	44.574	Scophthalmus_maximus
ENSCING00000005753	-	83	47.321	ENSSDUG00000023352	mrps35	65	47.321	Seriola_dumerili
ENSCING00000005753	-	96	42.336	ENSSLDG00000023837	mrps35	78	42.336	Seriola_lalandi_dorsalis
ENSCING00000005753	-	96	45.788	ENSSPUG00000018562	MRPS35	93	45.788	Sphenodon_punctatus
ENSCING00000005753	-	96	41.971	ENSSPAG00000012617	mrps35	79	41.971	Stegastes_partitus
ENSCING00000005753	-	96	47.445	ENSSSCG00000000547	MRPS35	72	47.445	Sus_scrofa
ENSCING00000005753	-	96	46.715	ENSTGUG00000012692	-	96	47.080	Taeniopygia_guttata
ENSCING00000005753	-	94	47.638	ENSTRUG00000016486	mrps35	63	47.638	Takifugu_rubripes
ENSCING00000005753	-	94	45.387	ENSTNIG00000003413	mrps35	77	45.387	Tetraodon_nigroviridis
ENSCING00000005753	-	96	39.781	ENSTBEG00000000314	MRPS35	81	39.781	Tupaia_belangeri
ENSCING00000005753	-	96	46.715	ENSTTRG00000012432	MRPS35	81	46.715	Tursiops_truncatus
ENSCING00000005753	-	96	47.445	ENSUAMG00000024912	MRPS35	81	47.445	Ursus_americanus
ENSCING00000005753	-	96	40.511	ENSUMAG00000001347	MRPS35	81	40.511	Ursus_maritimus
ENSCING00000005753	-	96	38.321	ENSVPAG00000012174	MRPS35	92	38.321	Vicugna_pacos
ENSCING00000005753	-	96	46.350	ENSVVUG00000030237	MRPS35	81	46.715	Vulpes_vulpes
ENSCING00000005753	-	77	40.455	ENSXETG00000001312	mrps35	64	40.455	Xenopus_tropicalis
ENSCING00000005753	-	96	44.574	ENSXCOG00000020893	mrps35	80	44.574	Xiphophorus_couchianus
ENSCING00000005753	-	96	44.574	ENSXMAG00000023627	mrps35	72	44.574	Xiphophorus_maculatus