EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005843 (Gene tree)
Gene ID: 778869
Gene Symbol: zf(c3h)-12
Alias: -
Full Name: Ciona intestinalis zinc finger protein (zf(c3h)-12)%2C mRNA.
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3955 bases
Position: chr14:2019801-2023755
Accession: NM_001078446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012055	RRM_1	PF00076.22	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012055	-	1595	-	ENSCINP00000012055	413 (aa)	-	F6V766

Gene Model

Click here to download ENSCING00000005843's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSG00000086589	RBM22	100	80.108	Homo_sapiens
ENSCING00000005843	zf(c3h)-12	99	62.470	ENSAPOG00000010338	rbm22	98	62.559	Acanthochromis_polyacanthus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSAMEG00000004544	RBM22	98	64.508	Ailuropoda_melanoleuca
ENSCING00000005843	zf(c3h)-12	99	56.308	ENSACIG00000016372	rbm22	98	56.410	Amphilophus_citrinellus
ENSCING00000005843	zf(c3h)-12	99	62.470	ENSAOCG00000007179	rbm22	98	62.559	Amphiprion_ocellaris
ENSCING00000005843	zf(c3h)-12	99	62.470	ENSAPEG00000016689	rbm22	98	62.559	Amphiprion_percula
ENSCING00000005843	zf(c3h)-12	99	63.183	ENSATEG00000008286	rbm22	98	63.357	Anabas_testudineus
ENSCING00000005843	zf(c3h)-12	98	60.000	ENSAPLG00000016408	RBM22	97	62.287	Anas_platyrhynchos
ENSCING00000005843	zf(c3h)-12	99	64.048	ENSACAG00000014750	RBM22	98	64.029	Anolis_carolinensis
ENSCING00000005843	zf(c3h)-12	91	58.793	ENSANAG00000019688	-	98	55.528	Aotus_nancymaae
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSANAG00000033743	-	98	64.508	Aotus_nancymaae
ENSCING00000005843	zf(c3h)-12	77	71.698	ENSACLG00000008863	rbm22	98	62.648	Astatotilapia_calliptera
ENSCING00000005843	zf(c3h)-12	99	62.559	ENSAMXG00000038080	rbm22	98	56.028	Astyanax_mexicanus
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSAMXG00000018529	-	98	61.520	Astyanax_mexicanus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSBTAG00000030366	RBM22	98	64.508	Bos_taurus
ENSCING00000005843	zf(c3h)-12	82	57.143	WBGene00011722	rbm-22	97	51.095	Caenorhabditis_elegans
ENSCING00000005843	zf(c3h)-12	94	60.567	ENSCJAG00000013247	-	88	62.690	Callithrix_jacchus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCJAG00000020963	RBM22	98	64.508	Callithrix_jacchus
ENSCING00000005843	zf(c3h)-12	99	61.466	ENSCAFG00000018082	RBM22	98	64.200	Canis_familiaris
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCAFG00020023671	RBM22	98	64.508	Canis_lupus_dingo
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCHIG00000015561	RBM22	98	64.508	Capra_hircus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSTSYG00000003939	-	98	64.508	Carlito_syrichta
ENSCING00000005843	zf(c3h)-12	88	53.100	ENSTSYG00000037586	-	98	54.223	Carlito_syrichta
ENSCING00000005843	zf(c3h)-12	94	59.259	ENSCAPG00000002598	RBM22	94	60.260	Cavia_aperea
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCPOG00000001946	RBM22	98	64.508	Cavia_porcellus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCCAG00000033546	RBM22	98	64.508	Cebus_capucinus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCATG00000042133	RBM22	98	64.508	Cercocebus_atys
ENSCING00000005843	zf(c3h)-12	99	54.028	ENSCLAG00000007106	-	98	53.349	Chinchilla_lanigera
ENSCING00000005843	zf(c3h)-12	99	49.282	ENSCLAG00000014221	-	92	50.839	Chinchilla_lanigera
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCLAG00000010842	-	98	64.508	Chinchilla_lanigera
ENSCING00000005843	zf(c3h)-12	80	70.091	ENSCSAG00000019006	-	89	68.644	Chlorocebus_sabaeus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCHOG00000001041	-	98	64.508	Choloepus_hoffmanni
ENSCING00000005843	zf(c3h)-12	99	63.484	ENSCHOG00000013522	-	98	63.549	Choloepus_hoffmanni
ENSCING00000005843	zf(c3h)-12	72	68.667	ENSCHOG00000004192	-	100	68.667	Choloepus_hoffmanni
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCPBG00000010094	RBM22	98	64.508	Chrysemys_picta_bellii
ENSCING00000005843	zf(c3h)-12	100	89.904	ENSCSAVG00000009145	-	100	88.462	Ciona_savignyi
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCANG00000025232	RBM22	98	64.508	Colobus_angolensis_palliatus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSCGRG00001015110	Rbm22	98	64.508	Cricetulus_griseus_chok1gshd
ENSCING00000005843	zf(c3h)-12	99	61.951	ENSCGRG00000011751	Rbm22	98	61.951	Cricetulus_griseus_crigri
ENSCING00000005843	zf(c3h)-12	99	63.507	ENSCSEG00000010790	rbm22	98	62.824	Cynoglossus_semilaevis
ENSCING00000005843	zf(c3h)-12	99	61.327	ENSCVAG00000010670	rbm22	98	63.744	Cyprinodon_variegatus
ENSCING00000005843	zf(c3h)-12	99	61.374	ENSDARG00000010238	rbm22	98	63.270	Danio_rerio
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSDNOG00000011166	RBM22	98	64.508	Dasypus_novemcinctus
ENSCING00000005843	zf(c3h)-12	99	45.131	ENSDORG00000005329	Rbm22	98	48.201	Dipodomys_ordii
ENSCING00000005843	zf(c3h)-12	75	65.161	FBgn0037220	CG14641	73	65.161	Drosophila_melanogaster
ENSCING00000005843	zf(c3h)-12	94	72.222	ENSEBUG00000016742	-	99	80.851	Eptatretus_burgeri
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSEASG00005002681	RBM22	98	64.508	Equus_asinus_asinus
ENSCING00000005843	zf(c3h)-12	80	70.091	ENSECAG00000014940	RBM22	76	68.644	Equus_caballus
ENSCING00000005843	zf(c3h)-12	99	47.031	ENSEEUG00000009778	-	98	49.161	Erinaceus_europaeus
ENSCING00000005843	zf(c3h)-12	99	61.137	ENSEEUG00000005638	-	98	63.549	Erinaceus_europaeus
ENSCING00000005843	zf(c3h)-12	99	61.667	ENSELUG00000001106	rbm22	98	60.526	Esox_lucius
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSFCAG00000018845	RBM22	98	64.508	Felis_catus
ENSCING00000005843	zf(c3h)-12	99	62.322	ENSFALG00000008051	RBM22	98	64.508	Ficedula_albicollis
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSFDAG00000020067	RBM22	98	64.508	Fukomys_damarensis
ENSCING00000005843	zf(c3h)-12	99	61.995	ENSFHEG00000014032	rbm22	98	62.322	Fundulus_heteroclitus
ENSCING00000005843	zf(c3h)-12	76	72.188	ENSGMOG00000010186	rbm22	99	61.939	Gadus_morhua
ENSCING00000005843	zf(c3h)-12	99	62.085	ENSGALG00000004555	RBM22	98	64.269	Gallus_gallus
ENSCING00000005843	zf(c3h)-12	77	71.384	ENSGAFG00000008621	rbm22	98	62.559	Gambusia_affinis
ENSCING00000005843	zf(c3h)-12	99	61.647	ENSGACG00000018027	rbm22	99	62.118	Gasterosteus_aculeatus
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSGAGG00000024305	RBM22	98	64.269	Gopherus_agassizii
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSGGOG00000012947	RBM22	98	64.508	Gorilla_gorilla
ENSCING00000005843	zf(c3h)-12	77	71.698	ENSHBUG00000002941	rbm22	98	62.648	Haplochromis_burtoni
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSHGLG00000008488	RBM22	98	64.508	Heterocephalus_glaber_female
ENSCING00000005843	zf(c3h)-12	98	61.408	ENSHGLG00100006872	RBM22	97	64.216	Heterocephalus_glaber_male
ENSCING00000005843	zf(c3h)-12	77	71.293	ENSHCOG00000016334	rbm22	89	67.989	Hippocampus_comes
ENSCING00000005843	zf(c3h)-12	77	71.698	ENSIPUG00000019751	rbm22	98	63.059	Ictalurus_punctatus
ENSCING00000005843	zf(c3h)-12	99	53.538	ENSSTOG00000029346	-	96	54.916	Ictidomys_tridecemlineatus
ENSCING00000005843	zf(c3h)-12	99	49.881	ENSSTOG00000027197	RBM22	98	52.518	Ictidomys_tridecemlineatus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSJJAG00000009565	Rbm22	98	64.508	Jaculus_jaculus
ENSCING00000005843	zf(c3h)-12	99	62.470	ENSKMAG00000004354	rbm22	98	62.796	Kryptolebias_marmoratus
ENSCING00000005843	zf(c3h)-12	99	61.995	ENSLBEG00000027750	rbm22	93	60.476	Labrus_bergylta
ENSCING00000005843	zf(c3h)-12	99	61.611	ENSLOCG00000010989	rbm22	98	64.218	Lepisosteus_oculatus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSLAFG00000006638	RBM22	98	64.508	Loxodonta_africana
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMFAG00000004034	RBM22	98	64.508	Macaca_fascicularis
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMMUG00000020683	RBM22	98	64.508	Macaca_mulatta
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMNEG00000035500	RBM22	98	64.508	Macaca_nemestrina
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMLEG00000034825	RBM22	98	64.508	Mandrillus_leucophaeus
ENSCING00000005843	zf(c3h)-12	99	62.470	ENSMAMG00000007370	rbm22	98	62.559	Mastacembelus_armatus
ENSCING00000005843	zf(c3h)-12	77	71.698	ENSMZEG00005013001	rbm22	98	62.648	Maylandia_zebra
ENSCING00000005843	zf(c3h)-12	99	62.085	ENSMGAG00000006298	RBM22	98	64.269	Meleagris_gallopavo
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMAUG00000001133	Rbm22	98	64.508	Mesocricetus_auratus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMICG00000033712	RBM22	98	64.508	Microcebus_murinus
ENSCING00000005843	zf(c3h)-12	99	56.770	ENSMOCG00000018311	Rbm22	98	59.472	Microtus_ochrogaster
ENSCING00000005843	zf(c3h)-12	77	71.069	ENSMMOG00000003192	rbm22	98	62.085	Mola_mola
ENSCING00000005843	zf(c3h)-12	99	59.427	ENSMODG00000006398	-	98	61.244	Monodelphis_domestica
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSMODG00000009574	-	98	64.269	Monodelphis_domestica
ENSCING00000005843	zf(c3h)-12	99	62.233	ENSMALG00000013964	rbm22	98	62.322	Monopterus_albus
ENSCING00000005843	zf(c3h)-12	99	61.758	MGP_CAROLIEiJ_G0022307	Rbm22	98	64.508	Mus_caroli
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMUSG00000024604	Rbm22	98	64.508	Mus_musculus
ENSCING00000005843	zf(c3h)-12	99	61.758	MGP_PahariEiJ_G0019037	Rbm22	98	64.508	Mus_pahari
ENSCING00000005843	zf(c3h)-12	99	61.758	MGP_SPRETEiJ_G0023219	Rbm22	98	64.508	Mus_spretus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMPUG00000013760	RBM22	98	64.508	Mustela_putorius_furo
ENSCING00000005843	zf(c3h)-12	99	63.549	ENSMLUG00000003461	-	98	64.029	Myotis_lucifugus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSMLUG00000009040	RBM22	98	64.508	Myotis_lucifugus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSNGAG00000018233	Rbm22	98	64.508	Nannospalax_galili
ENSCING00000005843	zf(c3h)-12	77	66.352	ENSNBRG00000010458	rbm22	91	63.277	Neolamprologus_brichardi
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSNLEG00000010397	-	98	64.508	Nomascus_leucogenys
ENSCING00000005843	zf(c3h)-12	74	54.902	ENSMEUG00000001573	-	72	54.902	Notamacropus_eugenii
ENSCING00000005843	zf(c3h)-12	99	59.390	ENSMEUG00000009348	-	98	59.472	Notamacropus_eugenii
ENSCING00000005843	zf(c3h)-12	99	51.435	ENSOPRG00000016612	-	83	57.185	Ochotona_princeps
ENSCING00000005843	zf(c3h)-12	99	62.233	ENSOPRG00000008481	-	98	64.508	Ochotona_princeps
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSODEG00000005016	RBM22	98	64.269	Octodon_degus
ENSCING00000005843	zf(c3h)-12	99	62.085	ENSONIG00000013049	rbm22	99	62.736	Oreochromis_niloticus
ENSCING00000005843	zf(c3h)-12	99	62.796	ENSOANG00000002314	RBM22	98	63.744	Ornithorhynchus_anatinus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSOCUG00000011532	RBM22	98	64.508	Oryctolagus_cuniculus
ENSCING00000005843	zf(c3h)-12	99	59.767	ENSORLG00000004975	rbm22	98	62.470	Oryzias_latipes
ENSCING00000005843	zf(c3h)-12	99	59.767	ENSORLG00020012969	rbm22	98	62.470	Oryzias_latipes_hni
ENSCING00000005843	zf(c3h)-12	99	59.767	ENSORLG00015022508	rbm22	98	62.470	Oryzias_latipes_hsok
ENSCING00000005843	zf(c3h)-12	99	59.535	ENSOMEG00000004904	rbm22	98	62.470	Oryzias_melastigma
ENSCING00000005843	zf(c3h)-12	99	61.268	ENSOGAG00000011086	RBM22	98	62.201	Otolemur_garnettii
ENSCING00000005843	zf(c3h)-12	99	61.229	ENSOARG00000007633	RBM22	98	63.007	Ovis_aries
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPPAG00000034432	RBM22	98	64.508	Pan_paniscus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPPRG00000011577	RBM22	98	64.508	Panthera_pardus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPTIG00000004453	RBM22	98	64.508	Panthera_tigris_altaica
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPTRG00000017423	RBM22	98	64.508	Pan_troglodytes
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPANG00000011297	RBM22	98	64.508	Papio_anubis
ENSCING00000005843	zf(c3h)-12	99	60.520	ENSPKIG00000010315	rbm22	98	62.796	Paramormyrops_kingsleyae
ENSCING00000005843	zf(c3h)-12	75	71.061	ENSPKIG00000019326	rbm22	80	67.232	Paramormyrops_kingsleyae
ENSCING00000005843	zf(c3h)-12	99	62.233	ENSPSIG00000012818	RBM22	98	64.508	Pelodiscus_sinensis
ENSCING00000005843	zf(c3h)-12	77	71.924	ENSPMGG00000017638	rbm22	99	62.559	Periophthalmus_magnuspinnatus
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSPEMG00000001753	Rbm22	98	64.269	Peromyscus_maniculatus_bairdii
ENSCING00000005843	zf(c3h)-12	78	57.143	ENSPMAG00000007317	-	98	56.725	Petromyzon_marinus
ENSCING00000005843	zf(c3h)-12	99	51.790	ENSPCIG00000015088	RBM22	98	53.477	Phascolarctos_cinereus
ENSCING00000005843	zf(c3h)-12	99	62.143	ENSPFOG00000005625	rbm22	98	62.708	Poecilia_formosa
ENSCING00000005843	zf(c3h)-12	99	61.628	ENSPLAG00000006344	rbm22	98	62.381	Poecilia_latipinna
ENSCING00000005843	zf(c3h)-12	99	57.110	ENSPMEG00000007992	rbm22	98	60.622	Poecilia_mexicana
ENSCING00000005843	zf(c3h)-12	99	61.905	ENSPREG00000003546	rbm22	98	62.233	Poecilia_reticulata
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPPYG00000015955	RBM22	98	64.508	Pongo_abelii
ENSCING00000005843	zf(c3h)-12	80	54.683	ENSPCAG00000015091	RBM22	93	54.237	Procavia_capensis
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSPVAG00000014231	RBM22	98	64.508	Pteropus_vampyrus
ENSCING00000005843	zf(c3h)-12	77	66.352	ENSPNYG00000000380	rbm22	91	63.277	Pundamilia_nyererei
ENSCING00000005843	zf(c3h)-12	99	62.824	ENSPNAG00000002687	rbm22	98	63.765	Pygocentrus_nattereri
ENSCING00000005843	zf(c3h)-12	80	70.181	ENSPNAG00000010001	-	98	62.945	Pygocentrus_nattereri
ENSCING00000005843	zf(c3h)-12	99	61.283	ENSRNOG00000019235	Rbm22	98	64.269	Rattus_norvegicus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSRBIG00000041683	RBM22	98	64.508	Rhinopithecus_bieti
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSRROG00000041637	RBM22	98	64.508	Rhinopithecus_roxellana
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSSBOG00000035400	-	98	64.269	Saimiri_boliviensis_boliviensis
ENSCING00000005843	zf(c3h)-12	99	61.283	ENSSHAG00000017734	-	98	64.029	Sarcophilus_harrisii
ENSCING00000005843	zf(c3h)-12	99	57.482	ENSSFOG00015022259	rbm22	98	62.619	Scleropages_formosus
ENSCING00000005843	zf(c3h)-12	99	63.507	ENSSFOG00015014955	rbm22	98	62.884	Scleropages_formosus
ENSCING00000005843	zf(c3h)-12	99	62.233	ENSSMAG00000002921	rbm22	98	62.648	Scophthalmus_maximus
ENSCING00000005843	zf(c3h)-12	99	62.945	ENSSDUG00000003846	rbm22	98	63.033	Seriola_dumerili
ENSCING00000005843	zf(c3h)-12	99	62.945	ENSSLDG00000003804	rbm22	98	63.033	Seriola_lalandi_dorsalis
ENSCING00000005843	zf(c3h)-12	99	61.995	ENSSPUG00000003986	RBM22	98	64.508	Sphenodon_punctatus
ENSCING00000005843	zf(c3h)-12	99	62.708	ENSSPAG00000000383	rbm22	98	62.796	Stegastes_partitus
ENSCING00000005843	zf(c3h)-12	99	61.520	ENSSSCG00000023231	RBM22	98	64.269	Sus_scrofa
ENSCING00000005843	zf(c3h)-12	99	62.322	ENSTGUG00000000850	RBM22	98	64.508	Taeniopygia_guttata
ENSCING00000005843	zf(c3h)-12	99	62.005	ENSTRUG00000004724	rbm22	98	63.121	Takifugu_rubripes
ENSCING00000005843	zf(c3h)-12	99	50.594	ENSTBEG00000005617	RBM22	98	53.237	Tupaia_belangeri
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSTTRG00000012778	RBM22	98	64.508	Tursiops_truncatus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSUAMG00000025133	RBM22	98	64.508	Ursus_americanus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSUMAG00000003651	RBM22	98	64.508	Ursus_maritimus
ENSCING00000005843	zf(c3h)-12	99	61.758	ENSVVUG00000007193	RBM22	98	64.508	Vulpes_vulpes
ENSCING00000005843	zf(c3h)-12	99	60.337	ENSXETG00000020435	rbm22	98	62.169	Xenopus_tropicalis
ENSCING00000005843	zf(c3h)-12	99	58.195	ENSXCOG00000003316	rbm22	98	58.531	Xiphophorus_couchianus
ENSCING00000005843	zf(c3h)-12	99	62.233	ENSXMAG00000008681	rbm22	98	62.559	Xiphophorus_maculatus