EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005938 (Gene tree)
Gene ID: 100186999
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2940 bases
Position: chr2:3200029-3202968
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012258	CNOT11	PF10155.9	1.3e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012258	-	1388	-	ENSCINP00000012258	368 (aa)	-	F6YYW3

Gene Model

Click here to download ENSCING00000005938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005938	-	100	62.933	ENSG00000158435	CNOT11	98	86.290	Homo_sapiens
ENSCING00000005938	-	98	63.462	ENSAPOG00000020231	cnot11	85	63.462	Acanthochromis_polyacanthus
ENSCING00000005938	-	100	62.933	ENSAMEG00000015585	CNOT11	76	62.933	Ailuropoda_melanoleuca
ENSCING00000005938	-	98	63.187	ENSACIG00000002791	cnot11	80	63.187	Amphilophus_citrinellus
ENSCING00000005938	-	98	63.462	ENSAOCG00000005087	cnot11	80	63.462	Amphiprion_ocellaris
ENSCING00000005938	-	85	58.228	ENSAPEG00000019235	cnot11	78	59.091	Amphiprion_percula
ENSCING00000005938	-	98	63.736	ENSATEG00000014714	cnot11	80	63.736	Anabas_testudineus
ENSCING00000005938	-	98	64.850	ENSAPLG00000002957	CNOT11	81	64.850	Anas_platyrhynchos
ENSCING00000005938	-	98	63.462	ENSACAG00000007718	CNOT11	80	63.462	Anolis_carolinensis
ENSCING00000005938	-	100	62.933	ENSANAG00000028092	CNOT11	73	62.933	Aotus_nancymaae
ENSCING00000005938	-	98	63.462	ENSACLG00000015057	cnot11	76	63.462	Astatotilapia_calliptera
ENSCING00000005938	-	98	64.286	ENSAMXG00000012843	cnot11	80	64.286	Astyanax_mexicanus
ENSCING00000005938	-	98	63.686	ENSBTAG00000008267	CNOT11	71	63.686	Bos_taurus
ENSCING00000005938	-	100	62.933	ENSCJAG00000021229	CNOT11	72	62.933	Callithrix_jacchus
ENSCING00000005938	-	100	62.933	ENSCAFG00000002199	CNOT11	71	62.933	Canis_familiaris
ENSCING00000005938	-	100	62.933	ENSCAFG00020024562	CNOT11	71	62.933	Canis_lupus_dingo
ENSCING00000005938	-	98	63.686	ENSCHIG00000026686	CNOT11	73	63.686	Capra_hircus
ENSCING00000005938	-	91	65.579	ENSTSYG00000006729	-	79	65.579	Carlito_syrichta
ENSCING00000005938	-	100	50.949	ENSTSYG00000031278	-	71	50.949	Carlito_syrichta
ENSCING00000005938	-	100	63.784	ENSCPOG00000012029	CNOT11	73	62.933	Cavia_porcellus
ENSCING00000005938	-	100	62.933	ENSCCAG00000027582	CNOT11	73	62.933	Cebus_capucinus
ENSCING00000005938	-	100	60.163	ENSCATG00000040259	CNOT11	72	60.163	Cercocebus_atys
ENSCING00000005938	-	100	62.933	ENSCSAG00000017167	CNOT11	72	62.933	Chlorocebus_sabaeus
ENSCING00000005938	-	81	85.802	ENSCHOG00000012050	CNOT11	73	85.802	Choloepus_hoffmanni
ENSCING00000005938	-	86	50.784	ENSCPBG00000004780	CNOT11	58	50.784	Chrysemys_picta_bellii
ENSCING00000005938	-	100	87.332	ENSCSAVG00000000886	-	82	87.332	Ciona_savignyi
ENSCING00000005938	-	50	87.568	ENSCSAVG00000004868	-	72	65.328	Ciona_savignyi
ENSCING00000005938	-	100	62.933	ENSCANG00000038129	CNOT11	82	62.933	Colobus_angolensis_palliatus
ENSCING00000005938	-	100	63.200	ENSCGRG00001018815	Cnot11	72	63.200	Cricetulus_griseus_chok1gshd
ENSCING00000005938	-	100	63.200	ENSCGRG00000003113	-	72	63.200	Cricetulus_griseus_crigri
ENSCING00000005938	-	98	60.989	ENSCSEG00000020759	cnot11	80	60.989	Cynoglossus_semilaevis
ENSCING00000005938	-	98	63.187	ENSCVAG00000022960	cnot11	80	63.187	Cyprinodon_variegatus
ENSCING00000005938	-	98	63.462	ENSDARG00000068596	cnot11	80	63.462	Danio_rerio
ENSCING00000005938	-	100	62.933	ENSDNOG00000011948	CNOT11	72	62.933	Dasypus_novemcinctus
ENSCING00000005938	-	100	63.200	ENSDORG00000004481	Cnot11	98	85.616	Dipodomys_ordii
ENSCING00000005938	-	60	58.371	FBgn0034963	Not11	96	58.371	Drosophila_melanogaster
ENSCING00000005938	-	98	63.686	ENSETEG00000002098	CNOT11	71	63.686	Echinops_telfairi
ENSCING00000005938	-	77	53.684	ENSEBUG00000011268	cnot11	74	53.684	Eptatretus_burgeri
ENSCING00000005938	-	98	63.686	ENSEASG00005018296	CNOT11	71	63.686	Equus_asinus_asinus
ENSCING00000005938	-	100	62.933	ENSECAG00000011967	CNOT11	72	62.933	Equus_caballus
ENSCING00000005938	-	72	85.106	ENSEEUG00000009076	-	52	85.106	Erinaceus_europaeus
ENSCING00000005938	-	98	63.462	ENSELUG00000009042	cnot11	80	63.462	Esox_lucius
ENSCING00000005938	-	100	62.933	ENSFCAG00000006924	CNOT11	72	62.933	Felis_catus
ENSCING00000005938	-	98	64.578	ENSFALG00000003802	CNOT11	81	64.578	Ficedula_albicollis
ENSCING00000005938	-	98	63.187	ENSFHEG00000001754	cnot11	80	63.187	Fundulus_heteroclitus
ENSCING00000005938	-	98	62.363	ENSGMOG00000005200	cnot11	80	62.363	Gadus_morhua
ENSCING00000005938	-	98	64.578	ENSGALG00000039563	CNOT11	76	64.578	Gallus_gallus
ENSCING00000005938	-	98	63.462	ENSGAFG00000004433	cnot11	80	63.462	Gambusia_affinis
ENSCING00000005938	-	98	63.736	ENSGACG00000007941	cnot11	80	63.736	Gasterosteus_aculeatus
ENSCING00000005938	-	98	63.736	ENSGAGG00000004292	CNOT11	76	63.736	Gopherus_agassizii
ENSCING00000005938	-	96	63.559	ENSGGOG00000005070	CNOT11	68	63.559	Gorilla_gorilla
ENSCING00000005938	-	98	63.462	ENSHBUG00000020454	cnot11	80	63.462	Haplochromis_burtoni
ENSCING00000005938	-	100	63.243	ENSHGLG00000005196	CNOT11	97	86.207	Heterocephalus_glaber_female
ENSCING00000005938	-	100	63.243	ENSHGLG00100005946	CNOT11	97	86.207	Heterocephalus_glaber_male
ENSCING00000005938	-	99	63.014	ENSHCOG00000001826	cnot11	80	63.014	Hippocampus_comes
ENSCING00000005938	-	98	62.466	ENSIPUG00000005134	cnot11	80	62.466	Ictalurus_punctatus
ENSCING00000005938	-	100	63.200	ENSSTOG00000002674	CNOT11	98	85.616	Ictidomys_tridecemlineatus
ENSCING00000005938	-	100	63.200	ENSJJAG00000017976	Cnot11	98	85.616	Jaculus_jaculus
ENSCING00000005938	-	99	63.003	ENSKMAG00000005191	cnot11	82	63.003	Kryptolebias_marmoratus
ENSCING00000005938	-	98	64.011	ENSLBEG00000022855	cnot11	80	64.011	Labrus_bergylta
ENSCING00000005938	-	98	63.736	ENSLACG00000012383	CNOT11	80	63.736	Latimeria_chalumnae
ENSCING00000005938	-	98	62.912	ENSLOCG00000010579	cnot11	80	62.912	Lepisosteus_oculatus
ENSCING00000005938	-	92	64.809	ENSLAFG00000006411	CNOT11	68	64.809	Loxodonta_africana
ENSCING00000005938	-	100	62.933	ENSMFAG00000044449	CNOT11	73	62.933	Macaca_fascicularis
ENSCING00000005938	-	100	62.933	ENSMMUG00000001147	CNOT11	72	62.933	Macaca_mulatta
ENSCING00000005938	-	100	62.933	ENSMNEG00000044355	CNOT11	73	62.933	Macaca_nemestrina
ENSCING00000005938	-	96	63.559	ENSMLEG00000024913	CNOT11	69	63.559	Mandrillus_leucophaeus
ENSCING00000005938	-	98	64.011	ENSMAMG00000013914	cnot11	80	64.011	Mastacembelus_armatus
ENSCING00000005938	-	98	63.462	ENSMZEG00005020316	cnot11	80	63.462	Maylandia_zebra
ENSCING00000005938	-	75	70.609	ENSMGAG00000014802	CNOT11	96	70.609	Meleagris_gallopavo
ENSCING00000005938	-	100	63.200	ENSMAUG00000008251	Cnot11	98	85.616	Mesocricetus_auratus
ENSCING00000005938	-	100	63.200	ENSMICG00000002973	CNOT11	72	63.200	Microcebus_murinus
ENSCING00000005938	-	100	63.200	ENSMOCG00000020059	Cnot11	98	85.616	Microtus_ochrogaster
ENSCING00000005938	-	98	63.462	ENSMMOG00000013493	cnot11	80	63.462	Mola_mola
ENSCING00000005938	-	98	63.462	ENSMODG00000001737	CNOT11	71	63.415	Monodelphis_domestica
ENSCING00000005938	-	97	62.849	ENSMALG00000013293	cnot11	79	62.849	Monopterus_albus
ENSCING00000005938	-	100	63.200	MGP_CAROLIEiJ_G0014071	Cnot11	98	85.616	Mus_caroli
ENSCING00000005938	-	100	63.200	ENSMUSG00000003135	Cnot11	98	85.616	Mus_musculus
ENSCING00000005938	-	100	63.200	MGP_PahariEiJ_G0027318	Cnot11	98	85.616	Mus_pahari
ENSCING00000005938	-	100	63.200	MGP_SPRETEiJ_G0014875	Cnot11	98	85.616	Mus_spretus
ENSCING00000005938	-	100	62.933	ENSMPUG00000012207	CNOT11	72	62.933	Mustela_putorius_furo
ENSCING00000005938	-	100	62.766	ENSMLUG00000004555	CNOT11	73	62.766	Myotis_lucifugus
ENSCING00000005938	-	100	63.200	ENSNGAG00000014276	Cnot11	97	86.207	Nannospalax_galili
ENSCING00000005938	-	98	63.462	ENSNBRG00000014731	cnot11	80	63.462	Neolamprologus_brichardi
ENSCING00000005938	-	100	62.933	ENSNLEG00000014472	CNOT11	74	62.933	Nomascus_leucogenys
ENSCING00000005938	-	98	63.462	ENSMEUG00000004695	CNOT11	72	63.462	Notamacropus_eugenii
ENSCING00000005938	-	90	62.985	ENSOPRG00000009923	CNOT11	65	62.985	Ochotona_princeps
ENSCING00000005938	-	100	63.243	ENSODEG00000007133	CNOT11	97	86.207	Octodon_degus
ENSCING00000005938	-	98	63.462	ENSONIG00000016162	cnot11	80	63.462	Oreochromis_niloticus
ENSCING00000005938	-	98	63.736	ENSOANG00000013148	CNOT11	76	63.736	Ornithorhynchus_anatinus
ENSCING00000005938	-	91	65.579	ENSOCUG00000004448	CNOT11	67	65.579	Oryctolagus_cuniculus
ENSCING00000005938	-	98	63.462	ENSORLG00000014270	cnot11	80	63.462	Oryzias_latipes
ENSCING00000005938	-	98	63.736	ENSORLG00020005490	cnot11	82	63.736	Oryzias_latipes_hni
ENSCING00000005938	-	98	63.736	ENSOMEG00000014389	cnot11	80	63.736	Oryzias_melastigma
ENSCING00000005938	-	100	62.599	ENSOGAG00000014506	CNOT11	72	62.599	Otolemur_garnettii
ENSCING00000005938	-	98	63.686	ENSOARG00000013243	CNOT11	71	63.686	Ovis_aries
ENSCING00000005938	-	100	62.933	ENSPPAG00000033121	CNOT11	85	62.933	Pan_paniscus
ENSCING00000005938	-	100	62.933	ENSPPRG00000025043	CNOT11	72	62.933	Panthera_pardus
ENSCING00000005938	-	91	56.083	ENSPTIG00000008532	CNOT11	82	56.083	Panthera_tigris_altaica
ENSCING00000005938	-	100	62.933	ENSPTRG00000012290	CNOT11	72	62.933	Pan_troglodytes
ENSCING00000005938	-	100	62.933	ENSPANG00000023665	CNOT11	73	62.933	Papio_anubis
ENSCING00000005938	-	98	64.011	ENSPKIG00000019709	cnot11	80	64.011	Paramormyrops_kingsleyae
ENSCING00000005938	-	84	66.987	ENSPSIG00000017469	CNOT11	97	66.987	Pelodiscus_sinensis
ENSCING00000005938	-	99	63.288	ENSPMGG00000000573	cnot11	81	63.288	Periophthalmus_magnuspinnatus
ENSCING00000005938	-	99	62.331	ENSPMAG00000001860	cnot11	81	62.331	Petromyzon_marinus
ENSCING00000005938	-	98	63.462	ENSPCIG00000016312	CNOT11	60	63.462	Phascolarctos_cinereus
ENSCING00000005938	-	98	63.462	ENSPFOG00000000176	cnot11	80	63.462	Poecilia_formosa
ENSCING00000005938	-	98	63.462	ENSPLAG00000023797	cnot11	80	63.462	Poecilia_latipinna
ENSCING00000005938	-	98	63.462	ENSPMEG00000015700	cnot11	80	63.462	Poecilia_mexicana
ENSCING00000005938	-	98	63.462	ENSPREG00000011520	cnot11	80	63.462	Poecilia_reticulata
ENSCING00000005938	-	100	62.933	ENSPPYG00000012103	CNOT11	72	62.933	Pongo_abelii
ENSCING00000005938	-	100	59.091	ENSPCAG00000004690	CNOT11	72	59.091	Procavia_capensis
ENSCING00000005938	-	100	63.200	ENSPCOG00000022088	CNOT11	73	63.200	Propithecus_coquereli
ENSCING00000005938	-	100	62.933	ENSPVAG00000002962	CNOT11	80	62.933	Pteropus_vampyrus
ENSCING00000005938	-	98	63.462	ENSPNYG00000023499	cnot11	80	63.462	Pundamilia_nyererei
ENSCING00000005938	-	98	64.835	ENSPNAG00000006187	cnot11	80	64.835	Pygocentrus_nattereri
ENSCING00000005938	-	100	63.200	ENSRNOG00000023220	Cnot11	73	63.200	Rattus_norvegicus
ENSCING00000005938	-	100	62.400	ENSRBIG00000006823	CNOT11	72	62.400	Rhinopithecus_bieti
ENSCING00000005938	-	100	62.933	ENSRROG00000033116	CNOT11	72	62.933	Rhinopithecus_roxellana
ENSCING00000005938	-	100	62.933	ENSSBOG00000030189	CNOT11	73	62.933	Saimiri_boliviensis_boliviensis
ENSCING00000005938	-	98	63.415	ENSSHAG00000006432	CNOT11	80	63.415	Sarcophilus_harrisii
ENSCING00000005938	-	89	64.955	ENSSFOG00015002194	cnot11	77	64.955	Scleropages_formosus
ENSCING00000005938	-	98	64.011	ENSSMAG00000010790	cnot11	80	64.011	Scophthalmus_maximus
ENSCING00000005938	-	98	63.736	ENSSDUG00000012467	cnot11	80	63.736	Seriola_dumerili
ENSCING00000005938	-	98	63.736	ENSSLDG00000020769	cnot11	80	63.736	Seriola_lalandi_dorsalis
ENSCING00000005938	-	90	62.687	ENSSARG00000006032	CNOT11	99	62.388	Sorex_araneus
ENSCING00000005938	-	98	62.803	ENSSPUG00000012189	CNOT11	81	63.881	Sphenodon_punctatus
ENSCING00000005938	-	98	63.462	ENSSPAG00000005202	cnot11	80	63.462	Stegastes_partitus
ENSCING00000005938	-	100	63.200	ENSSSCG00000008167	CNOT11	72	63.200	Sus_scrofa
ENSCING00000005938	-	97	64.820	ENSTGUG00000009952	-	81	64.820	Taeniopygia_guttata
ENSCING00000005938	-	75	68.817	ENSTGUG00000015810	-	97	68.817	Taeniopygia_guttata
ENSCING00000005938	-	99	62.740	ENSTRUG00000016939	cnot11	81	62.740	Takifugu_rubripes
ENSCING00000005938	-	89	63.830	ENSTBEG00000016383	CNOT11	65	62.985	Tupaia_belangeri
ENSCING00000005938	-	100	62.933	ENSTTRG00000016449	CNOT11	72	62.933	Tursiops_truncatus
ENSCING00000005938	-	100	62.933	ENSUAMG00000022337	CNOT11	72	62.933	Ursus_americanus
ENSCING00000005938	-	91	65.579	ENSUMAG00000007473	CNOT11	89	65.579	Ursus_maritimus
ENSCING00000005938	-	71	83.951	ENSVPAG00000012206	-	78	83.951	Vicugna_pacos
ENSCING00000005938	-	100	62.933	ENSVVUG00000028664	CNOT11	78	62.933	Vulpes_vulpes
ENSCING00000005938	-	98	63.836	ENSXETG00000033799	CNOT11	80	63.836	Xenopus_tropicalis
ENSCING00000005938	-	98	63.187	ENSXCOG00000008490	cnot11	80	63.187	Xiphophorus_couchianus
ENSCING00000005938	-	98	63.187	ENSXMAG00000008671	cnot11	80	63.187	Xiphophorus_maculatus