EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000005950 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2343 bases
Position: chr2:3223333-3225675
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012297	S1	PF00575.23	6.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012297	-	2313	-	ENSCINP00000012297	771 (aa)	-	F6YFB9

Gene Model

Click here to download ENSCING00000005950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000005950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000005950	-	99	42.420	ENSG00000068784	SRBD1	79	42.420	Homo_sapiens
ENSCING00000005950	-	99	40.025	ENSAPOG00000005103	si:ch211-117n7.8	78	40.050	Acanthochromis_polyacanthus
ENSCING00000005950	-	99	42.930	ENSAMEG00000005993	SRBD1	79	42.930	Ailuropoda_melanoleuca
ENSCING00000005950	-	99	39.776	ENSACIG00000009875	si:ch211-117n7.8	80	39.900	Amphilophus_citrinellus
ENSCING00000005950	-	99	39.900	ENSAOCG00000024718	si:ch211-117n7.8	79	39.900	Amphiprion_ocellaris
ENSCING00000005950	-	99	39.900	ENSAPEG00000002645	si:ch211-117n7.8	82	39.900	Amphiprion_percula
ENSCING00000005950	-	99	40.200	ENSATEG00000010844	si:ch211-117n7.8	79	40.200	Anabas_testudineus
ENSCING00000005950	-	99	43.829	ENSAPLG00000006313	SRBD1	79	43.829	Anas_platyrhynchos
ENSCING00000005950	-	99	42.366	ENSANAG00000025573	SRBD1	79	42.366	Aotus_nancymaae
ENSCING00000005950	-	99	40.025	ENSACLG00000024219	si:ch211-117n7.8	77	40.025	Astatotilapia_calliptera
ENSCING00000005950	-	99	39.497	ENSAMXG00000004294	SRBD1	78	39.924	Astyanax_mexicanus
ENSCING00000005950	-	99	42.132	ENSBTAG00000007508	SRBD1	76	42.132	Bos_taurus
ENSCING00000005950	-	99	42.694	ENSCJAG00000000727	SRBD1	79	42.694	Callithrix_jacchus
ENSCING00000005950	-	99	42.551	ENSCAFG00000002554	SRBD1	79	42.551	Canis_familiaris
ENSCING00000005950	-	99	42.405	ENSCAFG00020026284	SRBD1	91	41.890	Canis_lupus_dingo
ENSCING00000005950	-	99	42.239	ENSCHIG00000016535	SRBD1	78	42.239	Capra_hircus
ENSCING00000005950	-	99	42.551	ENSTSYG00000012797	SRBD1	79	42.551	Carlito_syrichta
ENSCING00000005950	-	99	42.894	ENSCPOG00000004773	SRBD1	79	42.894	Cavia_porcellus
ENSCING00000005950	-	99	42.911	ENSCCAG00000025589	SRBD1	79	42.911	Cebus_capucinus
ENSCING00000005950	-	99	42.366	ENSCATG00000039530	SRBD1	79	42.366	Cercocebus_atys
ENSCING00000005950	-	99	43.022	ENSCLAG00000008623	SRBD1	79	43.022	Chinchilla_lanigera
ENSCING00000005950	-	99	42.239	ENSCSAG00000013350	SRBD1	79	42.239	Chlorocebus_sabaeus
ENSCING00000005950	-	69	69.231	ENSCHOG00000003805	SRBD1	54	69.231	Choloepus_hoffmanni
ENSCING00000005950	-	99	42.748	ENSCPBG00000005677	SRBD1	80	42.748	Chrysemys_picta_bellii
ENSCING00000005950	-	100	61.089	ENSCSAVG00000000861	-	99	61.089	Ciona_savignyi
ENSCING00000005950	-	99	42.405	ENSCANG00000016307	SRBD1	79	42.405	Colobus_angolensis_palliatus
ENSCING00000005950	-	99	42.911	ENSCGRG00001000513	Srbd1	79	42.911	Cricetulus_griseus_chok1gshd
ENSCING00000005950	-	99	42.911	ENSCGRG00000002283	Srbd1	79	42.911	Cricetulus_griseus_crigri
ENSCING00000005950	-	99	39.900	ENSCSEG00000000856	si:ch211-117n7.8	79	39.900	Cynoglossus_semilaevis
ENSCING00000005950	-	99	41.074	ENSCVAG00000020212	si:ch211-117n7.8	84	41.074	Cyprinodon_variegatus
ENSCING00000005950	-	99	42.405	ENSDNOG00000018686	SRBD1	79	42.405	Dasypus_novemcinctus
ENSCING00000005950	-	99	42.038	ENSDORG00000010468	Srbd1	79	42.038	Dipodomys_ordii
ENSCING00000005950	-	99	36.181	FBgn0051156	CG31156	79	37.014	Drosophila_melanogaster
ENSCING00000005950	-	89	40.575	ENSETEG00000000739	SRBD1	72	40.820	Echinops_telfairi
ENSCING00000005950	-	92	39.945	ENSEBUG00000008902	si:ch211-117n7.8	96	39.945	Eptatretus_burgeri
ENSCING00000005950	-	98	41.806	ENSEASG00005003132	SRBD1	94	42.091	Equus_asinus_asinus
ENSCING00000005950	-	99	42.366	ENSECAG00000013865	SRBD1	77	42.366	Equus_caballus
ENSCING00000005950	-	99	40.602	ENSELUG00000012592	si:ch211-117n7.8	76	40.727	Esox_lucius
ENSCING00000005950	-	99	42.748	ENSFCAG00000005101	SRBD1	79	42.748	Felis_catus
ENSCING00000005950	-	99	43.980	ENSFALG00000012966	SRBD1	80	43.980	Ficedula_albicollis
ENSCING00000005950	-	99	42.638	ENSFDAG00000016670	SRBD1	80	42.638	Fukomys_damarensis
ENSCING00000005950	-	99	40.994	ENSFHEG00000019480	si:ch211-117n7.8	77	40.994	Fundulus_heteroclitus
ENSCING00000005950	-	54	37.757	ENSGMOG00000018010	-	87	37.757	Gadus_morhua
ENSCING00000005950	-	99	44.346	ENSGALG00000009990	SRBD1	79	44.346	Gallus_gallus
ENSCING00000005950	-	99	39.950	ENSGAFG00000019664	si:ch211-117n7.8	79	39.950	Gambusia_affinis
ENSCING00000005950	-	78	41.534	ENSGACG00000010794	si:ch211-117n7.8	99	41.853	Gasterosteus_aculeatus
ENSCING00000005950	-	99	42.748	ENSGAGG00000006166	SRBD1	94	42.748	Gopherus_agassizii
ENSCING00000005950	-	99	42.293	ENSGGOG00000005910	SRBD1	81	42.293	Gorilla_gorilla
ENSCING00000005950	-	92	38.981	ENSHBUG00000013207	si:ch211-117n7.8	76	38.981	Haplochromis_burtoni
ENSCING00000005950	-	99	42.254	ENSHGLG00000018153	-	79	42.254	Heterocephalus_glaber_female
ENSCING00000005950	-	99	42.254	ENSHGLG00100015183	-	79	42.254	Heterocephalus_glaber_male
ENSCING00000005950	-	99	39.747	ENSIPUG00000009661	srbd1	79	39.747	Ictalurus_punctatus
ENSCING00000005950	-	99	42.548	ENSSTOG00000005898	SRBD1	79	42.548	Ictidomys_tridecemlineatus
ENSCING00000005950	-	99	43.095	ENSJJAG00000022244	Srbd1	79	43.095	Jaculus_jaculus
ENSCING00000005950	-	99	40.699	ENSKMAG00000003473	si:ch211-117n7.8	78	40.699	Kryptolebias_marmoratus
ENSCING00000005950	-	99	40.226	ENSLBEG00000027518	si:ch211-117n7.8	77	40.226	Labrus_bergylta
ENSCING00000005950	-	99	43.219	ENSLACG00000009790	SRBD1	93	43.219	Latimeria_chalumnae
ENSCING00000005950	-	99	43.270	ENSLOCG00000016360	si:ch211-117n7.8	79	43.270	Lepisosteus_oculatus
ENSCING00000005950	-	99	42.239	ENSMFAG00000042026	SRBD1	79	42.239	Macaca_fascicularis
ENSCING00000005950	-	99	42.239	ENSMMUG00000003490	SRBD1	79	42.239	Macaca_mulatta
ENSCING00000005950	-	99	41.550	ENSMNEG00000034701	SRBD1	79	41.550	Macaca_nemestrina
ENSCING00000005950	-	99	42.366	ENSMLEG00000000745	SRBD1	79	42.366	Mandrillus_leucophaeus
ENSCING00000005950	-	99	40.476	ENSMAMG00000021921	si:ch211-117n7.8	79	40.476	Mastacembelus_armatus
ENSCING00000005950	-	99	39.900	ENSMZEG00005027369	si:ch211-117n7.8	77	39.900	Maylandia_zebra
ENSCING00000005950	-	99	41.761	ENSMGAG00000010273	SRBD1	98	41.761	Meleagris_gallopavo
ENSCING00000005950	-	99	40.881	ENSMAUG00000013916	Srbd1	95	40.881	Mesocricetus_auratus
ENSCING00000005950	-	99	42.532	ENSMICG00000007835	SRBD1	79	42.532	Microcebus_murinus
ENSCING00000005950	-	99	42.839	ENSMOCG00000018716	Srbd1	79	42.839	Microtus_ochrogaster
ENSCING00000005950	-	99	40.500	ENSMMOG00000007507	si:ch211-117n7.8	82	40.500	Mola_mola
ENSCING00000005950	-	99	39.179	ENSMALG00000001562	si:ch211-117n7.8	78	39.250	Monopterus_albus
ENSCING00000005950	-	99	43.710	MGP_CAROLIEiJ_G0021934	Srbd1	99	42.812	Mus_caroli
ENSCING00000005950	-	99	43.710	ENSMUSG00000024135	Srbd1	95	41.155	Mus_musculus
ENSCING00000005950	-	99	43.853	MGP_PahariEiJ_G0020924	Srbd1	79	43.853	Mus_pahari
ENSCING00000005950	-	99	43.456	MGP_SPRETEiJ_G0022850	Srbd1	79	43.456	Mus_spretus
ENSCING00000005950	-	99	42.045	ENSMLUG00000007039	SRBD1	79	42.045	Myotis_lucifugus
ENSCING00000005950	-	99	42.118	ENSNGAG00000011893	Srbd1	79	42.118	Nannospalax_galili
ENSCING00000005950	-	99	39.570	ENSNBRG00000012873	si:ch211-117n7.8	79	39.570	Neolamprologus_brichardi
ENSCING00000005950	-	99	42.748	ENSNLEG00000016877	SRBD1	79	42.748	Nomascus_leucogenys
ENSCING00000005950	-	99	41.997	ENSODEG00000012095	SRBD1	80	41.997	Octodon_degus
ENSCING00000005950	-	99	39.900	ENSONIG00000000945	si:ch211-117n7.8	94	39.447	Oreochromis_niloticus
ENSCING00000005950	-	99	42.239	ENSOCUG00000015385	SRBD1	79	41.940	Oryctolagus_cuniculus
ENSCING00000005950	-	99	38.202	ENSORLG00000004427	si:ch211-117n7.8	76	38.202	Oryzias_latipes
ENSCING00000005950	-	99	40.274	ENSORLG00020012792	si:ch211-117n7.8	77	40.323	Oryzias_latipes_hni
ENSCING00000005950	-	99	40.150	ENSORLG00015018598	si:ch211-117n7.8	77	40.150	Oryzias_latipes_hsok
ENSCING00000005950	-	99	40.025	ENSOMEG00000012229	si:ch211-117n7.8	77	40.375	Oryzias_melastigma
ENSCING00000005950	-	99	41.624	ENSOGAG00000001076	SRBD1	79	41.624	Otolemur_garnettii
ENSCING00000005950	-	99	39.225	ENSOARG00000005958	SRBD1	80	39.225	Ovis_aries
ENSCING00000005950	-	99	42.293	ENSPPAG00000038442	SRBD1	79	42.293	Pan_paniscus
ENSCING00000005950	-	99	42.621	ENSPPRG00000003449	SRBD1	79	42.621	Panthera_pardus
ENSCING00000005950	-	99	42.748	ENSPTIG00000012495	SRBD1	79	42.748	Panthera_tigris_altaica
ENSCING00000005950	-	99	42.025	ENSPTRG00000011889	SRBD1	79	42.025	Pan_troglodytes
ENSCING00000005950	-	99	42.239	ENSPANG00000008063	SRBD1	79	42.239	Papio_anubis
ENSCING00000005950	-	99	41.804	ENSPKIG00000021973	si:ch211-117n7.8	80	41.804	Paramormyrops_kingsleyae
ENSCING00000005950	-	99	42.621	ENSPSIG00000008992	SRBD1	79	42.621	Pelodiscus_sinensis
ENSCING00000005950	-	99	40.750	ENSPMGG00000013348	si:ch211-117n7.8	81	40.847	Periophthalmus_magnuspinnatus
ENSCING00000005950	-	99	41.605	ENSPEMG00000020684	Srbd1	79	41.605	Peromyscus_maniculatus_bairdii
ENSCING00000005950	-	99	40.325	ENSPFOG00000010650	si:ch211-117n7.8	78	40.325	Poecilia_formosa
ENSCING00000005950	-	99	40.075	ENSPLAG00000002141	si:ch211-117n7.8	78	40.075	Poecilia_latipinna
ENSCING00000005950	-	99	40.449	ENSPMEG00000018537	si:ch211-117n7.8	78	40.449	Poecilia_mexicana
ENSCING00000005950	-	99	40.150	ENSPREG00000003258	si:ch211-117n7.8	80	40.150	Poecilia_reticulata
ENSCING00000005950	-	99	44.118	ENSPPYG00000012444	SRBD1	75	44.118	Pongo_abelii
ENSCING00000005950	-	94	37.311	ENSPCAG00000005629	SRBD1	77	37.311	Procavia_capensis
ENSCING00000005950	-	92	39.065	ENSPCOG00000017669	SRBD1	72	39.065	Propithecus_coquereli
ENSCING00000005950	-	92	38.767	ENSPVAG00000001782	SRBD1	72	38.767	Pteropus_vampyrus
ENSCING00000005950	-	99	39.447	ENSPNYG00000000508	si:ch211-117n7.8	80	39.447	Pundamilia_nyererei
ENSCING00000005950	-	99	40.202	ENSPNAG00000013492	SRBD1	79	40.684	Pygocentrus_nattereri
ENSCING00000005950	-	99	43.130	ENSRNOG00000014720	Srbd1	79	43.112	Rattus_norvegicus
ENSCING00000005950	-	99	42.112	ENSRBIG00000033486	SRBD1	79	42.112	Rhinopithecus_bieti
ENSCING00000005950	-	99	42.112	ENSRROG00000041599	SRBD1	79	42.112	Rhinopithecus_roxellana
ENSCING00000005950	-	99	42.278	ENSSBOG00000024982	SRBD1	79	42.278	Saimiri_boliviensis_boliviensis
ENSCING00000005950	-	99	41.604	ENSSFOG00015001128	si:ch211-117n7.8	85	41.604	Scleropages_formosus
ENSCING00000005950	-	99	40.801	ENSSMAG00000018256	si:ch211-117n7.8	77	40.926	Scophthalmus_maximus
ENSCING00000005950	-	99	40.648	ENSSLDG00000023189	si:ch211-117n7.8	78	40.648	Seriola_lalandi_dorsalis
ENSCING00000005950	-	99	38.599	ENSSARG00000009740	SRBD1	80	38.599	Sorex_araneus
ENSCING00000005950	-	99	41.582	ENSSPUG00000010475	SRBD1	87	41.582	Sphenodon_punctatus
ENSCING00000005950	-	99	38.798	ENSSPAG00000008092	-	79	39.201	Stegastes_partitus
ENSCING00000005950	-	99	42.621	ENSSSCG00000008445	SRBD1	77	42.621	Sus_scrofa
ENSCING00000005950	-	99	44.291	ENSTGUG00000003878	SRBD1	95	44.291	Taeniopygia_guttata
ENSCING00000005950	-	99	40.926	ENSTRUG00000007080	si:ch211-117n7.8	87	40.926	Takifugu_rubripes
ENSCING00000005950	-	99	40.691	ENSTNIG00000007464	si:ch211-117n7.8	78	40.691	Tetraodon_nigroviridis
ENSCING00000005950	-	87	44.118	ENSTTRG00000011871	SRBD1	68	44.118	Tursiops_truncatus
ENSCING00000005950	-	99	42.875	ENSUAMG00000008126	SRBD1	96	38.909	Ursus_americanus
ENSCING00000005950	-	99	42.748	ENSUMAG00000012902	SRBD1	78	42.748	Ursus_maritimus
ENSCING00000005950	-	99	42.875	ENSVPAG00000006825	SRBD1	86	42.875	Vicugna_pacos
ENSCING00000005950	-	99	42.478	ENSVVUG00000005389	SRBD1	79	42.478	Vulpes_vulpes
ENSCING00000005950	-	99	33.981	ENSXETG00000002760	srbd1	80	34.420	Xenopus_tropicalis
ENSCING00000005950	-	99	40.075	ENSXMAG00000016861	si:ch211-117n7.8	78	40.075	Xiphophorus_maculatus