EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006069 (Gene tree)
Gene ID: 100177341
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 7546 bases
Position: chr6:1091994-1099539
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012588	BOP1NT	PF08145.12	1.5e-105	1	1
ENSCINP00000012564	BOP1NT	PF08145.12	4.2e-105	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012564	-	2373	-	ENSCINP00000012564	786 (aa)	-	F6YXI8
ENSCINT00000012588	-	2265	-	ENSCINP00000012588	740 (aa)	-	F6YWT8

Gene Model

Click here to download ENSCING00000006069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006069	-	91	55.357	ENSG00000261236	BOP1	93	51.973	Homo_sapiens
ENSCING00000006069	-	91	59.882	ENSAPOG00000019208	bop1	100	57.532	Acanthochromis_polyacanthus
ENSCING00000006069	-	93	52.326	ENSAMEG00000005886	BOP1	99	50.543	Ailuropoda_melanoleuca
ENSCING00000006069	-	86	59.438	ENSACIG00000007313	bop1	88	59.168	Amphilophus_citrinellus
ENSCING00000006069	-	91	60.030	ENSAOCG00000016222	bop1	92	57.961	Amphiprion_ocellaris
ENSCING00000006069	-	91	59.733	ENSAPEG00000018843	bop1	96	56.640	Amphiprion_percula
ENSCING00000006069	-	91	57.965	ENSATEG00000010331	bop1	99	52.519	Anabas_testudineus
ENSCING00000006069	-	79	54.545	ENSAPLG00000008324	BOP1	100	54.209	Anas_platyrhynchos
ENSCING00000006069	-	98	53.014	ENSANAG00000035474	BOP1	93	52.109	Aotus_nancymaae
ENSCING00000006069	-	88	59.084	ENSACLG00000005923	bop1	98	58.779	Astatotilapia_calliptera
ENSCING00000006069	-	79	55.593	ENSAMXG00000011549	bop1	87	55.593	Astyanax_mexicanus
ENSCING00000006069	-	93	52.251	ENSBTAG00000009811	BOP1	92	53.911	Bos_taurus
ENSCING00000006069	-	88	43.570	WBGene00012978	Y48B6A.1	93	43.268	Caenorhabditis_elegans
ENSCING00000006069	-	87	53.941	ENSCJAG00000021437	BOP1	84	51.511	Callithrix_jacchus
ENSCING00000006069	-	94	46.764	ENSCAFG00000001554	BOP1	94	48.780	Canis_familiaris
ENSCING00000006069	-	98	48.898	ENSCHIG00000013489	BOP1	93	47.891	Capra_hircus
ENSCING00000006069	-	93	55.298	ENSTSYG00000035588	BOP1	92	54.843	Carlito_syrichta
ENSCING00000006069	-	87	55.710	ENSCAPG00000005636	BOP1	100	54.410	Cavia_aperea
ENSCING00000006069	-	99	52.049	ENSCPOG00000005456	BOP1	92	53.067	Cavia_porcellus
ENSCING00000006069	-	91	55.655	ENSCCAG00000028318	BOP1	93	52.740	Cebus_capucinus
ENSCING00000006069	-	98	52.797	ENSCATG00000032450	BOP1	93	51.701	Cercocebus_atys
ENSCING00000006069	-	91	54.464	ENSCLAG00000010297	BOP1	95	51.635	Chinchilla_lanigera
ENSCING00000006069	-	91	55.060	ENSCSAG00000008653	BOP1	96	52.033	Chlorocebus_sabaeus
ENSCING00000006069	-	98	54.808	ENSCPBG00000018884	BOP1	94	55.493	Chrysemys_picta_bellii
ENSCING00000006069	-	87	81.720	ENSCSAVG00000006653	-	100	81.720	Ciona_savignyi
ENSCING00000006069	-	93	54.427	ENSCANG00000038730	BOP1	95	51.216	Colobus_angolensis_palliatus
ENSCING00000006069	-	96	52.933	ENSCGRG00001022601	BOP1	93	54.261	Cricetulus_griseus_chok1gshd
ENSCING00000006069	-	96	53.073	ENSCGRG00000012159	Bop1	93	54.558	Cricetulus_griseus_crigri
ENSCING00000006069	-	93	56.232	ENSCSEG00000018121	bop1	97	56.259	Cynoglossus_semilaevis
ENSCING00000006069	-	88	59.209	ENSCVAG00000023063	bop1	87	57.102	Cyprinodon_variegatus
ENSCING00000006069	-	88	60.578	ENSDARG00000063627	bop1	81	60.578	Danio_rerio
ENSCING00000006069	-	99	52.239	ENSDNOG00000047347	BOP1	94	51.832	Dasypus_novemcinctus
ENSCING00000006069	-	98	52.257	ENSDORG00000004860	Bop1	98	53.791	Dipodomys_ordii
ENSCING00000006069	-	89	48.054	FBgn0028744	CG5033	91	45.308	Drosophila_melanogaster
ENSCING00000006069	-	89	52.807	ENSEBUG00000003348	bop1	99	52.807	Eptatretus_burgeri
ENSCING00000006069	-	99	52.446	ENSEASG00005010217	BOP1	94	52.639	Equus_asinus_asinus
ENSCING00000006069	-	99	52.582	ENSECAG00000016440	BOP1	85	52.774	Equus_caballus
ENSCING00000006069	-	72	53.160	ENSEEUG00000005437	BOP1	99	53.160	Erinaceus_europaeus
ENSCING00000006069	-	88	61.350	ENSELUG00000022099	bop1	79	61.728	Esox_lucius
ENSCING00000006069	-	98	52.466	ENSFCAG00000022942	BOP1	94	52.446	Felis_catus
ENSCING00000006069	-	79	51.278	ENSFALG00000000360	BOP1	100	51.448	Ficedula_albicollis
ENSCING00000006069	-	93	53.690	ENSFDAG00000015755	BOP1	99	51.150	Fukomys_damarensis
ENSCING00000006069	-	74	57.455	ENSFHEG00000017233	bop1	88	57.455	Fundulus_heteroclitus
ENSCING00000006069	-	86	54.844	ENSGMOG00000000569	bop1	100	54.844	Gadus_morhua
ENSCING00000006069	-	95	53.633	ENSGALG00000053353	BOP1	98	54.533	Gallus_gallus
ENSCING00000006069	-	99	55.811	ENSGAFG00000011248	bop1	95	55.435	Gambusia_affinis
ENSCING00000006069	-	91	57.518	ENSGACG00000010420	bop1	99	57.310	Gasterosteus_aculeatus
ENSCING00000006069	-	98	54.905	ENSGAGG00000012770	BOP1	94	55.556	Gopherus_agassizii
ENSCING00000006069	-	93	54.651	ENSGGOG00000013590	BOP1	98	51.973	Gorilla_gorilla
ENSCING00000006069	-	88	59.237	ENSHBUG00000013186	bop1	100	54.679	Haplochromis_burtoni
ENSCING00000006069	-	93	53.980	ENSHGLG00000017934	BOP1	94	51.635	Heterocephalus_glaber_female
ENSCING00000006069	-	93	54.820	ENSHGLG00100007897	BOP1	99	54.820	Heterocephalus_glaber_male
ENSCING00000006069	-	88	59.265	ENSHCOG00000018713	bop1	92	56.835	Hippocampus_comes
ENSCING00000006069	-	96	55.911	ENSIPUG00000012277	bop1	87	56.571	Ictalurus_punctatus
ENSCING00000006069	-	98	52.941	ENSSTOG00000020925	BOP1	98	52.000	Ictidomys_tridecemlineatus
ENSCING00000006069	-	99	52.653	ENSJJAG00000003954	Bop1	98	51.973	Jaculus_jaculus
ENSCING00000006069	-	87	60.896	ENSKMAG00000001743	bop1	99	57.245	Kryptolebias_marmoratus
ENSCING00000006069	-	87	59.969	ENSLBEG00000022444	bop1	96	55.393	Labrus_bergylta
ENSCING00000006069	-	87	59.969	ENSLBEG00000023751	-	96	55.777	Labrus_bergylta
ENSCING00000006069	-	89	60.731	ENSLACG00000013738	BOP1	95	54.941	Latimeria_chalumnae
ENSCING00000006069	-	86	61.659	ENSLOCG00000007429	bop1	100	61.502	Lepisosteus_oculatus
ENSCING00000006069	-	98	48.907	ENSLAFG00000000686	BOP1	98	51.003	Loxodonta_africana
ENSCING00000006069	-	98	52.660	ENSMFAG00000031321	BOP1	96	51.565	Macaca_fascicularis
ENSCING00000006069	-	98	52.660	ENSMMUG00000014724	BOP1	93	51.565	Macaca_mulatta
ENSCING00000006069	-	98	44.672	ENSMNEG00000040269	BOP1	93	43.691	Macaca_nemestrina
ENSCING00000006069	-	98	52.797	ENSMLEG00000039202	BOP1	98	51.701	Mandrillus_leucophaeus
ENSCING00000006069	-	100	53.401	ENSMAMG00000022191	bop1	91	56.652	Mastacembelus_armatus
ENSCING00000006069	-	94	57.471	ENSMZEG00005011990	bop1	93	57.184	Maylandia_zebra
ENSCING00000006069	-	99	50.068	ENSMAUG00000012534	Bop1	99	49.593	Mesocricetus_auratus
ENSCING00000006069	-	98	53.425	ENSMICG00000015653	BOP1	90	54.793	Microcebus_murinus
ENSCING00000006069	-	96	52.793	ENSMOCG00000011668	Bop1	94	54.403	Microtus_ochrogaster
ENSCING00000006069	-	86	58.346	ENSMMOG00000017547	bop1	88	58.190	Mola_mola
ENSCING00000006069	-	93	53.458	ENSMODG00000010589	BOP1	85	51.090	Monodelphis_domestica
ENSCING00000006069	-	88	59.542	ENSMALG00000011552	bop1	93	54.570	Monopterus_albus
ENSCING00000006069	-	96	53.287	MGP_CAROLIEiJ_G0019928	Bop1	95	51.429	Mus_caroli
ENSCING00000006069	-	94	54.035	ENSMUSG00000022557	Bop1	95	51.429	Mus_musculus
ENSCING00000006069	-	95	54.131	MGP_PahariEiJ_G0019938	Bop1	95	51.837	Mus_pahari
ENSCING00000006069	-	95	53.704	MGP_SPRETEiJ_G0020831	Bop1	97	63.077	Mus_spretus
ENSCING00000006069	-	98	54.110	ENSMPUG00000006831	BOP1	95	53.425	Mustela_putorius_furo
ENSCING00000006069	-	99	53.125	ENSMLUG00000030120	BOP1	98	52.782	Myotis_lucifugus
ENSCING00000006069	-	86	56.719	ENSNGAG00000009053	Bop1	98	56.719	Nannospalax_galili
ENSCING00000006069	-	96	52.867	ENSNBRG00000021004	bop1	98	52.646	Neolamprologus_brichardi
ENSCING00000006069	-	86	55.556	ENSMEUG00000000450	BOP1	82	55.556	Notamacropus_eugenii
ENSCING00000006069	-	96	53.427	ENSODEG00000013361	BOP1	96	51.223	Octodon_degus
ENSCING00000006069	-	87	60.031	ENSONIG00000015336	bop1	100	55.570	Oreochromis_niloticus
ENSCING00000006069	-	93	58.526	ENSORLG00000001674	bop1	94	55.691	Oryzias_latipes
ENSCING00000006069	-	93	58.671	ENSORLG00020010315	bop1	94	55.827	Oryzias_latipes_hni
ENSCING00000006069	-	93	58.382	ENSORLG00015017381	bop1	94	55.556	Oryzias_latipes_hsok
ENSCING00000006069	-	88	60.671	ENSOMEG00000009341	bop1	100	54.130	Oryzias_melastigma
ENSCING00000006069	-	92	54.545	ENSOGAG00000017175	BOP1	92	53.736	Otolemur_garnettii
ENSCING00000006069	-	78	58.376	ENSOARG00000014255	BOP1	86	58.376	Ovis_aries
ENSCING00000006069	-	93	54.651	ENSPPAG00000043028	BOP1	98	51.837	Pan_paniscus
ENSCING00000006069	-	87	51.678	ENSPPRG00000008442	BOP1	93	51.678	Panthera_pardus
ENSCING00000006069	-	93	54.651	ENSPTRG00000020690	BOP1	93	51.837	Pan_troglodytes
ENSCING00000006069	-	98	52.596	ENSPANG00000024950	BOP1	93	51.701	Papio_anubis
ENSCING00000006069	-	99	56.753	ENSPKIG00000020273	bop1	75	60.796	Paramormyrops_kingsleyae
ENSCING00000006069	-	96	54.749	ENSPMGG00000023998	bop1	98	54.494	Periophthalmus_magnuspinnatus
ENSCING00000006069	-	86	59.844	ENSPMAG00000004108	bop1	100	59.688	Petromyzon_marinus
ENSCING00000006069	-	99	51.592	ENSPCIG00000009070	BOP1	97	51.921	Phascolarctos_cinereus
ENSCING00000006069	-	88	59.969	ENSPFOG00000007988	bop1	93	55.556	Poecilia_formosa
ENSCING00000006069	-	86	60.156	ENSPLAG00000006820	bop1	95	55.034	Poecilia_latipinna
ENSCING00000006069	-	86	60.000	ENSPMEG00000015671	bop1	93	54.897	Poecilia_mexicana
ENSCING00000006069	-	94	55.099	ENSPREG00000015440	bop1	93	55.601	Poecilia_reticulata
ENSCING00000006069	-	79	55.290	ENSPPYG00000029621	-	99	55.461	Pongo_abelii
ENSCING00000006069	-	98	51.233	ENSPCAG00000006873	BOP1	93	50.685	Procavia_capensis
ENSCING00000006069	-	93	54.046	ENSPCOG00000023196	BOP1	91	54.046	Propithecus_coquereli
ENSCING00000006069	-	86	59.375	ENSPNYG00000010914	bop1	100	54.958	Pundamilia_nyererei
ENSCING00000006069	-	97	52.809	ENSPNAG00000008525	bop1	88	56.104	Pygocentrus_nattereri
ENSCING00000006069	-	96	52.727	ENSRNOG00000021773	Bop1	96	53.517	Rattus_norvegicus
ENSCING00000006069	-	93	54.427	ENSRBIG00000027555	BOP1	93	51.622	Rhinopithecus_bieti
ENSCING00000006069	-	93	49.928	ENSRROG00000043244	BOP1	98	47.908	Rhinopithecus_roxellana
ENSCING00000006069	-	87	42.899	YMR049C	-	82	43.091	Saccharomyces_cerevisiae
ENSCING00000006069	-	98	53.014	ENSSBOG00000030140	BOP1	88	54.245	Saimiri_boliviensis_boliviensis
ENSCING00000006069	-	86	56.231	ENSSHAG00000000887	BOP1	99	56.231	Sarcophilus_harrisii
ENSCING00000006069	-	92	58.419	ENSSFOG00015010596	bop1	95	60.530	Scleropages_formosus
ENSCING00000006069	-	100	53.526	ENSSMAG00000014623	bop1	99	52.889	Scophthalmus_maximus
ENSCING00000006069	-	86	60.440	ENSSDUG00000021097	bop1	100	57.803	Seriola_dumerili
ENSCING00000006069	-	87	60.372	ENSSLDG00000001209	bop1	98	58.150	Seriola_lalandi_dorsalis
ENSCING00000006069	-	86	57.188	ENSSPUG00000017700	BOP1	94	56.563	Sphenodon_punctatus
ENSCING00000006069	-	86	60.062	ENSSPAG00000013925	bop1	92	59.594	Stegastes_partitus
ENSCING00000006069	-	94	54.506	ENSSSCG00000005920	BOP1	96	57.209	Sus_scrofa
ENSCING00000006069	-	94	55.362	ENSTNIG00000018156	bop1	97	57.205	Tetraodon_nigroviridis
ENSCING00000006069	-	88	60.360	ENSTTRG00000006423	BOP1	89	60.360	Tursiops_truncatus
ENSCING00000006069	-	86	56.719	ENSVVUG00000007851	BOP1	91	56.719	Vulpes_vulpes
ENSCING00000006069	-	97	53.112	ENSXCOG00000019431	bop1	94	53.923	Xiphophorus_couchianus