EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006179 (Gene tree)
Gene ID: 100185291
Gene Symbol: -
Alias: -
Full Name: nucleolar protein 16
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1666 bases
Position: chrHT000094.1:367610-369275
Accession: 100185291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012761	Nop16	PF09420.10	9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012761	-	919	-	ENSCINP00000012761	184 (aa)	XP_002126782	F7BK53

Gene Model

Click here to download ENSCING00000006179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006179	-	90	38.554	ENSAPOG00000010682	-	91	38.554	Acanthochromis_polyacanthus
ENSCING00000006179	-	94	44.000	ENSAMEG00000006988	-	96	44.000	Ailuropoda_melanoleuca
ENSCING00000006179	-	93	38.150	ENSACIG00000019263	nop16	95	38.150	Amphilophus_citrinellus
ENSCING00000006179	-	90	39.286	ENSAOCG00000005504	nop16	91	39.286	Amphiprion_ocellaris
ENSCING00000006179	-	90	39.286	ENSAPEG00000006605	nop16	91	39.286	Amphiprion_percula
ENSCING00000006179	-	87	40.491	ENSATEG00000014089	nop16	95	40.571	Anabas_testudineus
ENSCING00000006179	-	95	41.899	ENSACAG00000006333	-	98	41.899	Anolis_carolinensis
ENSCING00000006179	-	93	41.618	ENSANAG00000027410	-	95	41.618	Aotus_nancymaae
ENSCING00000006179	-	94	42.045	ENSANAG00000015743	-	96	42.045	Aotus_nancymaae
ENSCING00000006179	-	93	40.230	ENSACLG00000025227	nop16	95	40.230	Astatotilapia_calliptera
ENSCING00000006179	-	90	37.500	ENSAMXG00000006843	nop16	92	37.500	Astyanax_mexicanus
ENSCING00000006179	-	94	44.571	ENSBTAG00000010734	NOP16	96	44.571	Bos_taurus
ENSCING00000006179	-	68	34.483	WBGene00013958	ZK265.6	88	33.146	Caenorhabditis_elegans
ENSCING00000006179	-	94	44.571	ENSCAFG00000016694	NOP16	96	44.571	Canis_familiaris
ENSCING00000006179	-	94	44.571	ENSCAFG00020011505	-	91	44.571	Canis_lupus_dingo
ENSCING00000006179	-	94	44.571	ENSCHIG00000022082	-	96	44.571	Capra_hircus
ENSCING00000006179	-	94	44.000	ENSTSYG00000030409	-	96	44.000	Carlito_syrichta
ENSCING00000006179	-	94	38.286	ENSTSYG00000032690	-	96	38.286	Carlito_syrichta
ENSCING00000006179	-	95	45.198	ENSCPOG00000026072	-	96	45.198	Cavia_porcellus
ENSCING00000006179	-	87	44.099	ENSCCAG00000026775	-	91	44.099	Cebus_capucinus
ENSCING00000006179	-	93	45.087	ENSCLAG00000015405	-	95	45.087	Chinchilla_lanigera
ENSCING00000006179	-	94	45.714	ENSCSAG00000009400	-	96	45.714	Chlorocebus_sabaeus
ENSCING00000006179	-	87	43.210	ENSCPBG00000022647	-	88	43.210	Chrysemys_picta_bellii
ENSCING00000006179	-	100	69.022	ENSCSAVG00000000269	-	100	69.022	Ciona_savignyi
ENSCING00000006179	-	98	44.505	ENSCGRG00001004259	Nop16	100	44.505	Cricetulus_griseus_chok1gshd
ENSCING00000006179	-	98	44.505	ENSCGRG00000010975	Nop16	100	44.505	Cricetulus_griseus_crigri
ENSCING00000006179	-	76	35.000	ENSCSEG00000020523	nop16	91	34.756	Cynoglossus_semilaevis
ENSCING00000006179	-	93	36.000	ENSCVAG00000020140	nop16	95	36.000	Cyprinodon_variegatus
ENSCING00000006179	-	93	38.150	ENSDARG00000044402	nop16	95	38.150	Danio_rerio
ENSCING00000006179	-	94	44.571	ENSDNOG00000042890	-	96	44.571	Dasypus_novemcinctus
ENSCING00000006179	-	97	42.778	ENSDORG00000008872	Nop16	99	42.778	Dipodomys_ordii
ENSCING00000006179	-	94	31.771	FBgn0039868	CG11563	91	31.771	Drosophila_melanogaster
ENSCING00000006179	-	84	36.250	ENSEBUG00000011196	nop16	87	36.250	Eptatretus_burgeri
ENSCING00000006179	-	94	44.571	ENSEASG00005011988	-	96	44.571	Equus_asinus_asinus
ENSCING00000006179	-	94	44.571	ENSECAG00000021354	NOP16	96	44.571	Equus_caballus
ENSCING00000006179	-	93	36.628	ENSELUG00000000401	nop16	95	36.628	Esox_lucius
ENSCING00000006179	-	94	44.571	ENSFCAG00000025473	-	96	44.571	Felis_catus
ENSCING00000006179	-	86	40.491	ENSFALG00000008553	-	88	40.491	Ficedula_albicollis
ENSCING00000006179	-	94	45.143	ENSFDAG00000000193	-	96	45.143	Fukomys_damarensis
ENSCING00000006179	-	93	38.150	ENSFHEG00000016452	nop16	95	38.150	Fundulus_heteroclitus
ENSCING00000006179	-	86	44.375	ENSGALG00000003355	-	88	44.375	Gallus_gallus
ENSCING00000006179	-	82	37.500	ENSGAFG00000011616	nop16	81	37.500	Gambusia_affinis
ENSCING00000006179	-	81	35.099	ENSGACG00000020810	nop16	94	36.196	Gasterosteus_aculeatus
ENSCING00000006179	-	81	35.099	ENSGACG00000020819	-	92	36.585	Gasterosteus_aculeatus
ENSCING00000006179	-	87	34.337	ENSGACG00000003122	-	98	36.723	Gasterosteus_aculeatus
ENSCING00000006179	-	87	37.037	ENSGACG00000002618	-	98	37.931	Gasterosteus_aculeatus
ENSCING00000006179	-	93	39.655	ENSHBUG00000013527	nop16	95	39.655	Haplochromis_burtoni
ENSCING00000006179	-	97	45.556	ENSHGLG00000013437	NOP16	97	45.556	Heterocephalus_glaber_female
ENSCING00000006179	-	97	45.556	ENSHGLG00100011375	NOP16	97	45.556	Heterocephalus_glaber_male
ENSCING00000006179	-	88	41.615	ENSHCOG00000019999	nop16	89	41.615	Hippocampus_comes
ENSCING00000006179	-	85	37.179	ENSIPUG00000006682	nop16	86	37.179	Ictalurus_punctatus
ENSCING00000006179	-	94	44.571	ENSSTOG00000004869	-	96	44.571	Ictidomys_tridecemlineatus
ENSCING00000006179	-	98	43.407	ENSJJAG00000017655	Nop16	100	43.407	Jaculus_jaculus
ENSCING00000006179	-	90	39.286	ENSKMAG00000006164	nop16	91	39.286	Kryptolebias_marmoratus
ENSCING00000006179	-	93	38.857	ENSLBEG00000018355	nop16	77	38.857	Labrus_bergylta
ENSCING00000006179	-	97	39.444	ENSLACG00000014884	nop16	99	39.444	Latimeria_chalumnae
ENSCING00000006179	-	89	35.152	ENSLOCG00000012348	nop16	96	36.723	Lepisosteus_oculatus
ENSCING00000006179	-	94	44.571	ENSLAFG00000017886	-	96	44.571	Loxodonta_africana
ENSCING00000006179	-	87	39.506	ENSMAMG00000021868	nop16	88	41.358	Mastacembelus_armatus
ENSCING00000006179	-	93	40.230	ENSMZEG00005012112	nop16	95	40.230	Maylandia_zebra
ENSCING00000006179	-	93	40.116	ENSMAUG00000015569	-	99	40.116	Mesocricetus_auratus
ENSCING00000006179	-	98	45.055	ENSMOCG00000020788	Nop16	100	45.055	Microtus_ochrogaster
ENSCING00000006179	-	93	40.462	ENSMMOG00000016054	nop16	98	40.462	Mola_mola
ENSCING00000006179	-	93	40.805	ENSMODG00000005214	-	95	40.805	Monodelphis_domestica
ENSCING00000006179	-	81	37.333	ENSMALG00000021263	nop16	88	38.272	Monopterus_albus
ENSCING00000006179	-	98	45.055	MGP_CAROLIEiJ_G0018538	Nop16	100	45.055	Mus_caroli
ENSCING00000006179	-	98	44.505	ENSMUSG00000025869	Nop16	100	44.505	Mus_musculus
ENSCING00000006179	-	98	43.956	MGP_PahariEiJ_G0019603	Nop16	100	43.956	Mus_pahari
ENSCING00000006179	-	98	44.505	MGP_SPRETEiJ_G0019418	Nop16	100	44.505	Mus_spretus
ENSCING00000006179	-	94	45.143	ENSMPUG00000012552	-	96	45.143	Mustela_putorius_furo
ENSCING00000006179	-	94	45.143	ENSMPUG00000016964	-	96	45.143	Mustela_putorius_furo
ENSCING00000006179	-	87	44.099	ENSMLUG00000003504	-	88	44.099	Myotis_lucifugus
ENSCING00000006179	-	95	45.198	ENSNGAG00000018045	Nop16	97	45.198	Nannospalax_galili
ENSCING00000006179	-	93	39.655	ENSNBRG00000015181	nop16	96	39.655	Neolamprologus_brichardi
ENSCING00000006179	-	94	45.714	ENSODEG00000009586	-	96	45.714	Octodon_degus
ENSCING00000006179	-	93	41.379	ENSONIG00000016417	nop16	95	41.379	Oreochromis_niloticus
ENSCING00000006179	-	100	42.473	ENSOCUG00000013171	-	99	42.473	Oryctolagus_cuniculus
ENSCING00000006179	-	87	37.037	ENSORLG00000026611	nop16	95	37.356	Oryzias_latipes
ENSCING00000006179	-	93	38.728	ENSOMEG00000023001	nop16	95	38.728	Oryzias_melastigma
ENSCING00000006179	-	100	44.624	ENSOGAG00000000824	-	99	44.624	Otolemur_garnettii
ENSCING00000006179	-	94	44.571	ENSOARG00000002165	-	96	44.571	Ovis_aries
ENSCING00000006179	-	94	45.714	ENSPPAG00000035473	-	96	45.714	Pan_paniscus
ENSCING00000006179	-	94	44.571	ENSPPRG00000016600	-	96	44.571	Panthera_pardus
ENSCING00000006179	-	94	45.143	ENSPTIG00000011708	-	96	45.143	Panthera_tigris_altaica
ENSCING00000006179	-	94	45.714	ENSPTRG00000017560	NOP16	96	45.714	Pan_troglodytes
ENSCING00000006179	-	75	35.252	ENSPKIG00000009587	nop16	88	37.267	Paramormyrops_kingsleyae
ENSCING00000006179	-	67	44.000	ENSPSIG00000013546	-	85	44.000	Pelodiscus_sinensis
ENSCING00000006179	-	87	40.361	ENSPMGG00000003443	nop16	92	40.361	Periophthalmus_magnuspinnatus
ENSCING00000006179	-	98	45.055	ENSPEMG00000020268	Nop16	100	45.055	Peromyscus_maniculatus_bairdii
ENSCING00000006179	-	95	41.011	ENSPCIG00000009782	-	98	41.011	Phascolarctos_cinereus
ENSCING00000006179	-	93	36.571	ENSPFOG00000010549	nop16	95	36.571	Poecilia_formosa
ENSCING00000006179	-	76	37.589	ENSPLAG00000007124	nop16	69	37.589	Poecilia_latipinna
ENSCING00000006179	-	93	37.572	ENSPMEG00000008611	nop16	95	37.572	Poecilia_mexicana
ENSCING00000006179	-	93	38.150	ENSPREG00000012940	nop16	95	38.150	Poecilia_reticulata
ENSCING00000006179	-	94	45.714	ENSPPYG00000016070	-	96	45.714	Pongo_abelii
ENSCING00000006179	-	93	40.230	ENSPNYG00000013529	nop16	95	40.230	Pundamilia_nyererei
ENSCING00000006179	-	92	39.412	ENSPNAG00000016233	nop16	95	39.412	Pygocentrus_nattereri
ENSCING00000006179	-	98	44.505	ENSRNOG00000017284	Nop16	100	44.505	Rattus_norvegicus
ENSCING00000006179	-	94	39.429	ENSSHAG00000001724	-	96	39.429	Sarcophilus_harrisii
ENSCING00000006179	-	76	39.716	ENSSFOG00015010537	nop16	76	38.286	Scleropages_formosus
ENSCING00000006179	-	73	40.580	ENSSDUG00000022349	nop16	95	37.714	Seriola_dumerili
ENSCING00000006179	-	73	39.855	ENSSLDG00000025171	nop16	95	37.143	Seriola_lalandi_dorsalis
ENSCING00000006179	-	77	37.415	ENSSARG00000006699	-	65	37.415	Sorex_araneus
ENSCING00000006179	-	87	42.236	ENSSPUG00000006508	-	88	42.236	Sphenodon_punctatus
ENSCING00000006179	-	87	41.358	ENSSPAG00000011772	nop16	88	41.358	Stegastes_partitus
ENSCING00000006179	-	93	44.253	ENSSSCG00000029577	-	95	44.253	Sus_scrofa
ENSCING00000006179	-	86	42.331	ENSTGUG00000000543	-	88	42.331	Taeniopygia_guttata
ENSCING00000006179	-	86	38.272	ENSTRUG00000020255	nop16	95	38.857	Takifugu_rubripes
ENSCING00000006179	-	86	38.750	ENSTNIG00000007616	nop16	95	39.306	Tetraodon_nigroviridis
ENSCING00000006179	-	94	44.000	ENSUAMG00000005139	-	96	44.000	Ursus_americanus
ENSCING00000006179	-	94	44.000	ENSVVUG00000001697	-	91	44.000	Vulpes_vulpes
ENSCING00000006179	-	93	36.000	ENSXETG00000022342	nop16	98	36.000	Xenopus_tropicalis
ENSCING00000006179	-	93	38.150	ENSXCOG00000018829	nop16	96	38.150	Xiphophorus_couchianus
ENSCING00000006179	-	93	38.728	ENSXMAG00000029113	nop16	95	38.728	Xiphophorus_maculatus