EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006180 (Gene tree)
Gene ID: 100175151
Gene Symbol: -
Alias: -
Full Name: 40S ribosomal protein S10-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 480 bases
Position: chrHT000094.1:369518-369997
Accession: 100175151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012762	S10_plectin	PF03501.15	1.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012762	-	480	-	ENSCINP00000012762	159 (aa)	XP_002126653	F7BK44

Gene Model

Click here to download ENSCING00000006180's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006180	-	64	60.194	ENSAPOG00000014059	-	70	60.194	Acanthochromis_polyacanthus
ENSCING00000006180	-	77	49.242	ENSAPOG00000016494	-	69	49.242	Acanthochromis_polyacanthus
ENSCING00000006180	-	79	47.826	ENSACIG00000019704	-	71	47.826	Amphilophus_citrinellus
ENSCING00000006180	-	64	59.223	ENSACIG00000013806	-	57	59.223	Amphilophus_citrinellus
ENSCING00000006180	-	83	44.872	ENSAOCG00000011000	-	90	44.872	Amphiprion_ocellaris
ENSCING00000006180	-	99	43.396	ENSAOCG00000007730	-	56	57.895	Amphiprion_ocellaris
ENSCING00000006180	-	64	57.282	ENSAPEG00000019531	-	58	57.282	Amphiprion_percula
ENSCING00000006180	-	60	47.917	ENSAPEG00000017745	-	63	47.917	Amphiprion_percula
ENSCING00000006180	-	53	57.647	ENSATEG00000004340	-	60	57.647	Anabas_testudineus
ENSCING00000006180	-	62	57.576	ENSACLG00000001013	-	85	46.053	Astatotilapia_calliptera
ENSCING00000006180	-	67	59.259	ENSAMXG00000037914	-	65	59.259	Astyanax_mexicanus
ENSCING00000006180	-	100	47.799	WBGene00004479	rps-10	89	47.826	Caenorhabditis_elegans
ENSCING00000006180	-	64	59.223	ENSCSEG00000009179	-	60	59.223	Cynoglossus_semilaevis
ENSCING00000006180	-	96	52.201	FBgn0027494	RpS10a	90	53.061	Drosophila_melanogaster
ENSCING00000006180	-	96	58.788	FBgn0285947	RpS10b	94	57.962	Drosophila_melanogaster
ENSCING00000006180	-	59	56.842	ENSEBUG00000015221	-	62	56.842	Eptatretus_burgeri
ENSCING00000006180	-	65	56.604	ENSECAG00000039725	-	51	56.190	Equus_caballus
ENSCING00000006180	-	64	59.223	ENSFHEG00000008769	-	64	59.223	Fundulus_heteroclitus
ENSCING00000006180	-	62	57.576	ENSHBUG00000018067	-	85	46.053	Haplochromis_burtoni
ENSCING00000006180	-	64	60.194	ENSHBUG00000023819	-	61	60.194	Haplochromis_burtoni
ENSCING00000006180	-	94	44.000	ENSLBEG00000020432	-	63	56.842	Labrus_bergylta
ENSCING00000006180	-	88	48.936	ENSLACG00000010998	-	77	48.936	Latimeria_chalumnae
ENSCING00000006180	-	62	57.576	ENSMZEG00005026198	-	85	46.053	Maylandia_zebra
ENSCING00000006180	-	64	61.165	ENSMZEG00005007838	-	61	61.165	Maylandia_zebra
ENSCING00000006180	-	59	63.158	ENSMMOG00000003228	-	54	63.158	Mola_mola
ENSCING00000006180	-	62	54.545	ENSMMOG00000014380	-	52	54.545	Mola_mola
ENSCING00000006180	-	58	54.737	ENSMALG00000015614	-	58	54.255	Monopterus_albus
ENSCING00000006180	-	64	60.194	ENSNBRG00000008848	-	71	60.194	Neolamprologus_brichardi
ENSCING00000006180	-	62	57.576	ENSNBRG00000016554	-	58	57.576	Neolamprologus_brichardi
ENSCING00000006180	-	97	42.938	ENSPKIG00000013061	-	90	44.172	Paramormyrops_kingsleyae
ENSCING00000006180	-	64	60.194	ENSPMGG00000017071	-	79	50.000	Periophthalmus_magnuspinnatus
ENSCING00000006180	-	99	47.059	ENSPMAG00000010266	-	78	50.000	Petromyzon_marinus
ENSCING00000006180	-	100	42.331	ENSPMAG00000003064	-	92	41.892	Petromyzon_marinus
ENSCING00000006180	-	64	59.223	ENSPLAG00000012690	-	75	51.471	Poecilia_latipinna
ENSCING00000006180	-	64	60.194	ENSPNYG00000012665	-	61	60.194	Pundamilia_nyererei
ENSCING00000006180	-	87	45.395	ENSPNYG00000006286	-	85	45.395	Pundamilia_nyererei
ENSCING00000006180	-	63	56.436	ENSPNAG00000021290	-	57	56.436	Pygocentrus_nattereri
ENSCING00000006180	-	62	51.515	YOR293W	RPS10A	93	51.515	Saccharomyces_cerevisiae
ENSCING00000006180	-	62	50.505	YMR230W	RPS10B	93	50.505	Saccharomyces_cerevisiae
ENSCING00000006180	-	82	48.701	ENSSFOG00015009603	-	77	48.701	Scleropages_formosus
ENSCING00000006180	-	72	54.310	ENSSFOG00015012004	-	61	54.310	Scleropages_formosus
ENSCING00000006180	-	64	61.165	ENSSDUG00000010997	-	61	61.165	Seriola_dumerili
ENSCING00000006180	-	87	43.571	ENSSDUG00000011052	-	84	44.286	Seriola_dumerili
ENSCING00000006180	-	88	42.208	ENSSLDG00000016257	-	84	42.208	Seriola_lalandi_dorsalis
ENSCING00000006180	-	64	61.165	ENSSLDG00000012473	-	65	61.165	Seriola_lalandi_dorsalis
ENSCING00000006180	-	59	55.789	ENSSPAG00000012512	-	50	55.789	Stegastes_partitus
ENSCING00000006180	-	64	57.692	ENSSPAG00000015615	-	80	57.692	Stegastes_partitus
ENSCING00000006180	-	62	58.586	ENSSSCG00000033521	-	61	58.586	Sus_scrofa
ENSCING00000006180	-	58	58.511	ENSXETG00000032983	-	83	46.203	Xenopus_tropicalis
ENSCING00000006180	-	64	59.223	ENSXCOG00000016917	-	63	59.223	Xiphophorus_couchianus
ENSCING00000006180	-	82	48.611	ENSXMAG00000029046	-	82	46.897	Xiphophorus_maculatus