EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006190 (Gene tree)
Gene ID: 100178254
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3176 bases
Position: chrHT000094.1:335328-338503
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012778	RNase_HII	PF01351.18	2.7e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012778	-	1055	-	ENSCINP00000012778	292 (aa)	-	F7B1W3

Gene Model

Click here to download ENSCING00000006190's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006190	-	100	51.333	ENSG00000104889	RNASEH2A	100	51.333	Homo_sapiens
ENSCING00000006190	-	99	53.115	ENSAPOG00000004101	rnaseh2a	99	53.115	Acanthochromis_polyacanthus
ENSCING00000006190	-	100	51.505	ENSAMEG00000012323	RNASEH2A	100	51.505	Ailuropoda_melanoleuca
ENSCING00000006190	-	87	57.647	ENSACIG00000002658	rnaseh2a	100	57.647	Amphilophus_citrinellus
ENSCING00000006190	-	95	54.082	ENSAOCG00000009217	rnaseh2a	95	54.082	Amphiprion_ocellaris
ENSCING00000006190	-	99	52.787	ENSAPEG00000022937	rnaseh2a	99	52.787	Amphiprion_percula
ENSCING00000006190	-	100	51.623	ENSATEG00000000908	rnaseh2a	100	51.623	Anabas_testudineus
ENSCING00000006190	-	100	53.000	ENSACAG00000003338	RNASEH2A	100	53.000	Anolis_carolinensis
ENSCING00000006190	-	95	42.759	ENSANAG00000037932	RNASEH2A	95	42.759	Aotus_nancymaae
ENSCING00000006190	-	100	52.922	ENSACLG00000009169	rnaseh2a	100	52.922	Astatotilapia_calliptera
ENSCING00000006190	-	99	46.801	ENSAMXG00000000436	rnaseh2a	99	46.801	Astyanax_mexicanus
ENSCING00000006190	-	99	51.178	ENSBTAG00000009661	RNASEH2A	99	51.178	Bos_taurus
ENSCING00000006190	-	91	48.736	WBGene00004383	rnh-2	93	48.736	Caenorhabditis_elegans
ENSCING00000006190	-	100	51.163	ENSCJAG00000004873	RNASEH2A	100	51.163	Callithrix_jacchus
ENSCING00000006190	-	95	53.873	ENSCAFG00000017159	RNASEH2A	95	53.873	Canis_familiaris
ENSCING00000006190	-	95	53.873	ENSCAFG00020005190	RNASEH2A	57	53.873	Canis_lupus_dingo
ENSCING00000006190	-	99	51.178	ENSCHIG00000014460	RNASEH2A	99	51.178	Capra_hircus
ENSCING00000006190	-	95	53.846	ENSTSYG00000025418	RNASEH2A	95	53.846	Carlito_syrichta
ENSCING00000006190	-	62	54.301	ENSCAPG00000003411	RNASEH2A	98	54.301	Cavia_aperea
ENSCING00000006190	-	95	52.817	ENSCPOG00000038877	RNASEH2A	95	52.817	Cavia_porcellus
ENSCING00000006190	-	100	52.159	ENSCCAG00000030453	RNASEH2A	100	52.159	Cebus_capucinus
ENSCING00000006190	-	100	51.495	ENSCATG00000029609	RNASEH2A	100	51.495	Cercocebus_atys
ENSCING00000006190	-	95	54.577	ENSCLAG00000014930	RNASEH2A	95	54.577	Chinchilla_lanigera
ENSCING00000006190	-	100	51.495	ENSCSAG00000006567	RNASEH2A	100	51.495	Chlorocebus_sabaeus
ENSCING00000006190	-	100	53.041	ENSCPBG00000023909	RNASEH2A	100	53.041	Chrysemys_picta_bellii
ENSCING00000006190	-	100	77.397	ENSCSAVG00000010904	-	100	77.397	Ciona_savignyi
ENSCING00000006190	-	100	51.000	ENSCANG00000027433	RNASEH2A	100	51.000	Colobus_angolensis_palliatus
ENSCING00000006190	-	100	51.656	ENSCGRG00001005021	Rnaseh2a	100	51.656	Cricetulus_griseus_chok1gshd
ENSCING00000006190	-	100	51.656	ENSCGRG00000016602	Rnaseh2a	100	51.656	Cricetulus_griseus_crigri
ENSCING00000006190	-	98	52.492	ENSCSEG00000009842	rnaseh2a	98	52.492	Cynoglossus_semilaevis
ENSCING00000006190	-	93	48.746	ENSCVAG00000021203	rnaseh2a	99	46.959	Cyprinodon_variegatus
ENSCING00000006190	-	100	52.443	ENSDARG00000018891	rnaseh2a	100	52.443	Danio_rerio
ENSCING00000006190	-	84	52.778	ENSDNOG00000036532	RNASEH2A	99	52.778	Dasypus_novemcinctus
ENSCING00000006190	-	100	51.333	ENSDORG00000009008	Rnaseh2a	100	51.333	Dipodomys_ordii
ENSCING00000006190	-	94	47.586	FBgn0031252	CG13690	83	47.586	Drosophila_melanogaster
ENSCING00000006190	-	72	43.396	ENSETEG00000001956	-	99	43.396	Echinops_telfairi
ENSCING00000006190	-	81	53.750	ENSEBUG00000003380	rnaseh2a	75	53.659	Eptatretus_burgeri
ENSCING00000006190	-	88	54.864	ENSEASG00005004118	RNASEH2A	93	54.864	Equus_asinus_asinus
ENSCING00000006190	-	98	51.701	ENSECAG00000007013	RNASEH2A	98	51.701	Equus_caballus
ENSCING00000006190	-	100	51.007	ENSEEUG00000008222	RNASEH2A	100	51.007	Erinaceus_europaeus
ENSCING00000006190	-	99	52.303	ENSELUG00000023079	rnaseh2a	100	51.362	Esox_lucius
ENSCING00000006190	-	100	51.000	ENSFCAG00000000474	RNASEH2A	100	51.000	Felis_catus
ENSCING00000006190	-	95	53.169	ENSFDAG00000003595	RNASEH2A	92	57.676	Fukomys_damarensis
ENSCING00000006190	-	100	51.475	ENSFHEG00000007682	rnaseh2a	100	51.475	Fundulus_heteroclitus
ENSCING00000006190	-	98	49.505	ENSGMOG00000005650	rnaseh2a	98	49.505	Gadus_morhua
ENSCING00000006190	-	94	50.709	ENSGALG00000052002	RNASEH2A	68	50.709	Gallus_gallus
ENSCING00000006190	-	99	53.642	ENSGAFG00000009624	rnaseh2a	99	53.642	Gambusia_affinis
ENSCING00000006190	-	99	52.805	ENSGACG00000016019	rnaseh2a	99	52.805	Gasterosteus_aculeatus
ENSCING00000006190	-	100	52.174	ENSGAGG00000013859	RNASEH2A	100	52.174	Gopherus_agassizii
ENSCING00000006190	-	100	51.667	ENSGGOG00000005846	RNASEH2A	100	51.667	Gorilla_gorilla
ENSCING00000006190	-	93	55.556	ENSHBUG00000005267	rnaseh2a	96	55.556	Haplochromis_burtoni
ENSCING00000006190	-	100	50.336	ENSHGLG00000018801	RNASEH2A	100	50.336	Heterocephalus_glaber_female
ENSCING00000006190	-	100	50.671	ENSHGLG00100015773	RNASEH2A	100	50.671	Heterocephalus_glaber_male
ENSCING00000006190	-	99	54.636	ENSHCOG00000016593	rnaseh2a	99	54.636	Hippocampus_comes
ENSCING00000006190	-	99	52.961	ENSIPUG00000024299	rnaseh2a	99	52.961	Ictalurus_punctatus
ENSCING00000006190	-	95	52.650	ENSSTOG00000006224	RNASEH2A	93	56.846	Ictidomys_tridecemlineatus
ENSCING00000006190	-	100	52.000	ENSJJAG00000017547	Rnaseh2a	100	52.000	Jaculus_jaculus
ENSCING00000006190	-	100	51.475	ENSKMAG00000019829	rnaseh2a	100	51.475	Kryptolebias_marmoratus
ENSCING00000006190	-	99	53.443	ENSLBEG00000020494	rnaseh2a	99	53.443	Labrus_bergylta
ENSCING00000006190	-	87	47.287	ENSLACG00000007789	RNASEH2A	99	47.287	Latimeria_chalumnae
ENSCING00000006190	-	100	51.803	ENSLOCG00000007890	rnaseh2a	99	51.803	Lepisosteus_oculatus
ENSCING00000006190	-	100	50.836	ENSLAFG00000015571	RNASEH2A	100	50.836	Loxodonta_africana
ENSCING00000006190	-	100	51.495	ENSMFAG00000002011	RNASEH2A	100	51.495	Macaca_fascicularis
ENSCING00000006190	-	95	54.007	ENSMMUG00000005690	RNASEH2A	95	54.007	Macaca_mulatta
ENSCING00000006190	-	100	51.495	ENSMNEG00000033054	RNASEH2A	100	51.495	Macaca_nemestrina
ENSCING00000006190	-	95	53.659	ENSMLEG00000043654	RNASEH2A	95	53.659	Mandrillus_leucophaeus
ENSCING00000006190	-	99	52.787	ENSMAMG00000003062	rnaseh2a	98	55.556	Mastacembelus_armatus
ENSCING00000006190	-	100	52.597	ENSMZEG00005023857	rnaseh2a	100	52.597	Maylandia_zebra
ENSCING00000006190	-	53	52.147	ENSMAUG00000021740	-	100	52.147	Mesocricetus_auratus
ENSCING00000006190	-	100	50.166	ENSMICG00000016430	RNASEH2A	100	50.166	Microcebus_murinus
ENSCING00000006190	-	95	53.659	ENSMOCG00000017408	Rnaseh2a	95	53.659	Microtus_ochrogaster
ENSCING00000006190	-	87	60.392	ENSMMOG00000008447	rnaseh2a	100	60.392	Mola_mola
ENSCING00000006190	-	100	49.511	ENSMODG00000006997	RNASEH2A	100	49.511	Monodelphis_domestica
ENSCING00000006190	-	100	52.597	ENSMALG00000021607	rnaseh2a	100	53.516	Monopterus_albus
ENSCING00000006190	-	95	39.236	MGP_CAROLIEiJ_G0031319	-	94	51.678	Mus_caroli
ENSCING00000006190	-	95	54.007	ENSMUSG00000052926	Rnaseh2a	93	59.746	Mus_musculus
ENSCING00000006190	-	95	54.035	MGP_PahariEiJ_G0022924	Rnaseh2a	93	59.746	Mus_pahari
ENSCING00000006190	-	95	54.355	MGP_SPRETEiJ_G0032438	Rnaseh2a	95	54.355	Mus_spretus
ENSCING00000006190	-	100	50.836	ENSMPUG00000004586	RNASEH2A	100	50.836	Mustela_putorius_furo
ENSCING00000006190	-	95	54.196	ENSMLUG00000012723	RNASEH2A	95	54.196	Myotis_lucifugus
ENSCING00000006190	-	95	55.944	ENSNGAG00000017988	Rnaseh2a	95	55.944	Nannospalax_galili
ENSCING00000006190	-	100	52.922	ENSNBRG00000018731	rnaseh2a	100	52.922	Neolamprologus_brichardi
ENSCING00000006190	-	100	51.827	ENSNLEG00000012806	RNASEH2A	100	51.827	Nomascus_leucogenys
ENSCING00000006190	-	72	55.189	ENSMEUG00000006001	RNASEH2A	99	55.189	Notamacropus_eugenii
ENSCING00000006190	-	92	45.091	ENSOPRG00000004811	RNASEH2A	93	45.091	Ochotona_princeps
ENSCING00000006190	-	100	51.678	ENSODEG00000009772	RNASEH2A	100	51.678	Octodon_degus
ENSCING00000006190	-	100	52.273	ENSONIG00000018033	rnaseh2a	99	52.273	Oreochromis_niloticus
ENSCING00000006190	-	100	45.695	ENSOANG00000009079	RNASEH2A	100	45.695	Ornithorhynchus_anatinus
ENSCING00000006190	-	100	52.614	ENSORLG00000004042	rnaseh2a	100	52.614	Oryzias_latipes
ENSCING00000006190	-	100	52.614	ENSORLG00020009483	rnaseh2a	100	52.614	Oryzias_latipes_hni
ENSCING00000006190	-	100	52.288	ENSORLG00015007548	rnaseh2a	100	52.288	Oryzias_latipes_hsok
ENSCING00000006190	-	100	52.614	ENSOMEG00000016454	rnaseh2a	96	56.627	Oryzias_melastigma
ENSCING00000006190	-	100	51.163	ENSOGAG00000012214	RNASEH2A	100	51.163	Otolemur_garnettii
ENSCING00000006190	-	99	51.178	ENSOARG00000010721	RNASEH2A	99	51.178	Ovis_aries
ENSCING00000006190	-	100	51.667	ENSPPAG00000028092	RNASEH2A	100	51.667	Pan_paniscus
ENSCING00000006190	-	100	51.333	ENSPPRG00000010585	RNASEH2A	100	51.333	Panthera_pardus
ENSCING00000006190	-	95	53.147	ENSPTIG00000013366	RNASEH2A	95	53.147	Panthera_tigris_altaica
ENSCING00000006190	-	100	51.827	ENSPTRG00000010542	RNASEH2A	100	51.827	Pan_troglodytes
ENSCING00000006190	-	100	51.495	ENSPANG00000034495	RNASEH2A	100	51.495	Papio_anubis
ENSCING00000006190	-	100	51.815	ENSPKIG00000009756	rnaseh2a	100	51.815	Paramormyrops_kingsleyae
ENSCING00000006190	-	64	54.639	ENSPSIG00000012039	RNASEH2A	100	54.639	Pelodiscus_sinensis
ENSCING00000006190	-	87	57.647	ENSPMGG00000023392	rnaseh2a	100	57.647	Periophthalmus_magnuspinnatus
ENSCING00000006190	-	100	50.993	ENSPEMG00000018009	Rnaseh2a	100	50.993	Peromyscus_maniculatus_bairdii
ENSCING00000006190	-	98	48.667	ENSPMAG00000009060	rnaseh2a	98	48.667	Petromyzon_marinus
ENSCING00000006190	-	100	50.489	ENSPCIG00000014119	RNASEH2A	100	50.489	Phascolarctos_cinereus
ENSCING00000006190	-	100	52.787	ENSPFOG00000012627	rnaseh2a	100	51.623	Poecilia_formosa
ENSCING00000006190	-	87	58.039	ENSPLAG00000015901	rnaseh2a	100	58.039	Poecilia_latipinna
ENSCING00000006190	-	62	53.608	ENSPLAG00000018723	-	85	53.608	Poecilia_latipinna
ENSCING00000006190	-	87	57.647	ENSPMEG00000000647	rnaseh2a	100	57.647	Poecilia_mexicana
ENSCING00000006190	-	61	53.646	ENSPMEG00000009032	-	87	53.646	Poecilia_mexicana
ENSCING00000006190	-	100	50.980	ENSPREG00000015015	rnaseh2a	100	50.980	Poecilia_reticulata
ENSCING00000006190	-	100	50.662	ENSPPYG00000009608	RNASEH2A	100	50.662	Pongo_abelii
ENSCING00000006190	-	100	51.007	ENSPCAG00000015319	RNASEH2A	100	51.007	Procavia_capensis
ENSCING00000006190	-	100	50.498	ENSPCOG00000003686	RNASEH2A	100	50.498	Propithecus_coquereli
ENSCING00000006190	-	97	41.438	ENSPVAG00000014703	RNASEH2A	98	41.438	Pteropus_vampyrus
ENSCING00000006190	-	100	48.544	ENSPNYG00000023986	rnaseh2a	100	48.544	Pundamilia_nyererei
ENSCING00000006190	-	99	51.815	ENSPNAG00000021017	rnaseh2a	99	51.815	Pygocentrus_nattereri
ENSCING00000006190	-	100	51.163	ENSRNOG00000003504	Rnaseh2a	100	51.163	Rattus_norvegicus
ENSCING00000006190	-	95	53.659	ENSRBIG00000023554	RNASEH2A	95	53.659	Rhinopithecus_bieti
ENSCING00000006190	-	95	53.659	ENSRROG00000043799	RNASEH2A	95	53.659	Rhinopithecus_roxellana
ENSCING00000006190	-	82	41.732	YNL072W	RNH201	81	41.732	Saccharomyces_cerevisiae
ENSCING00000006190	-	100	51.495	ENSSBOG00000033164	RNASEH2A	100	51.495	Saimiri_boliviensis_boliviensis
ENSCING00000006190	-	100	48.544	ENSSHAG00000015552	RNASEH2A	100	48.544	Sarcophilus_harrisii
ENSCING00000006190	-	98	52.667	ENSSFOG00015009692	rnaseh2a	98	52.667	Scleropages_formosus
ENSCING00000006190	-	100	51.623	ENSSMAG00000013986	rnaseh2a	100	51.623	Scophthalmus_maximus
ENSCING00000006190	-	96	53.125	ENSSDUG00000005280	rnaseh2a	96	54.480	Seriola_dumerili
ENSCING00000006190	-	100	51.623	ENSSLDG00000023766	rnaseh2a	100	51.623	Seriola_lalandi_dorsalis
ENSCING00000006190	-	100	53.247	ENSSPAG00000012769	rnaseh2a	100	53.247	Stegastes_partitus
ENSCING00000006190	-	100	50.498	ENSSSCG00000013737	RNASEH2A	100	50.498	Sus_scrofa
ENSCING00000006190	-	99	52.117	ENSTRUG00000000049	rnaseh2a	100	51.613	Takifugu_rubripes
ENSCING00000006190	-	99	51.803	ENSTNIG00000004533	rnaseh2a	98	51.803	Tetraodon_nigroviridis
ENSCING00000006190	-	72	54.717	ENSTTRG00000003592	RNASEH2A	99	54.717	Tursiops_truncatus
ENSCING00000006190	-	100	51.171	ENSUAMG00000019593	RNASEH2A	100	51.171	Ursus_americanus
ENSCING00000006190	-	79	55.172	ENSUMAG00000006254	-	73	55.172	Ursus_maritimus
ENSCING00000006190	-	100	54.485	ENSXETG00000004762	rnaseh2a	99	54.485	Xenopus_tropicalis
ENSCING00000006190	-	100	52.131	ENSXCOG00000013485	rnaseh2a	100	52.131	Xiphophorus_couchianus
ENSCING00000006190	-	100	52.131	ENSXMAG00000006953	rnaseh2a	100	52.131	Xiphophorus_maculatus