EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2346 bases
Position: chr10:3626278-3628623
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000012844	SpoU_methylase	PF00588.19	5.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000012844	-	860	-	ENSCINP00000012844	259 (aa)	-	F6YVG2

Gene Model

Click here to download ENSCING00000006232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006232	-	61	53.503	ENSACIG00000020931	si:dkey-85a20.4	86	53.503	Amphilophus_citrinellus
ENSCING00000006232	-	61	53.503	ENSAOCG00000009950	si:dkey-85a20.4	85	53.503	Amphiprion_ocellaris
ENSCING00000006232	-	61	53.503	ENSAPEG00000012906	si:dkey-85a20.4	85	53.503	Amphiprion_percula
ENSCING00000006232	-	61	54.777	ENSACLG00000002018	si:dkey-85a20.4	86	54.777	Astatotilapia_calliptera
ENSCING00000006232	-	61	54.777	ENSAMXG00000018028	si:dkey-85a20.4	82	54.777	Astyanax_mexicanus
ENSCING00000006232	-	97	77.291	ENSCSAVG00000005745	-	62	77.291	Ciona_savignyi
ENSCING00000006232	-	60	51.282	ENSCVAG00000011124	-	99	51.282	Cyprinodon_variegatus
ENSCING00000006232	-	60	54.194	ENSDARG00000092550	si:dkey-85a20.4	81	54.194	Danio_rerio
ENSCING00000006232	-	60	51.923	ENSHCOG00000013439	si:dkey-85a20.4	85	51.923	Hippocampus_comes
ENSCING00000006232	-	60	52.564	ENSLBEG00000008830	-	96	52.564	Labrus_bergylta
ENSCING00000006232	-	95	43.590	MGP_CAROLIEiJ_G0031729	Tarbp1	78	42.966	Mus_caroli
ENSCING00000006232	-	61	53.503	ENSNBRG00000014368	si:dkey-85a20.4	85	53.503	Neolamprologus_brichardi
ENSCING00000006232	-	61	54.140	ENSOMEG00000001519	-	85	54.140	Oryzias_melastigma
ENSCING00000006232	-	59	55.263	ENSPMGG00000019801	si:dkey-85a20.4	82	55.263	Periophthalmus_magnuspinnatus
ENSCING00000006232	-	59	54.194	ENSTRUG00000021368	si:dkey-85a20.4	96	54.194	Takifugu_rubripes