EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006332 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 9926 bases
Position: chr8:3005730-3015655
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013050	ResIII	PF04851.15	8.7e-09	1	1
ENSCINP00000013050	DEAD	PF00270.29	8.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013050	-	3058	-	ENSCINP00000013050	804 (aa)	-	F6PXA9

Gene Model

Click here to download ENSCING00000006332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006332	-	89	59.574	ENSG00000163312	HELQ	68	59.574	Homo_sapiens
ENSCING00000006332	-	96	51.667	ENSAMEG00000004921	HELQ	77	51.667	Ailuropoda_melanoleuca
ENSCING00000006332	-	94	48.425	ENSACIG00000020216	helq	80	48.425	Amphilophus_citrinellus
ENSCING00000006332	-	95	50.963	ENSAOCG00000014323	helq	79	50.963	Amphiprion_ocellaris
ENSCING00000006332	-	96	51.535	ENSAPEG00000022964	helq	81	51.535	Amphiprion_percula
ENSCING00000006332	-	94	47.513	ENSAPEG00000023153	-	80	47.513	Amphiprion_percula
ENSCING00000006332	-	96	51.418	ENSATEG00000023420	helq	75	51.418	Anabas_testudineus
ENSCING00000006332	-	95	52.000	ENSAPLG00000012292	HELQ	77	52.000	Anas_platyrhynchos
ENSCING00000006332	-	96	52.672	ENSACAG00000010842	HELQ	74	52.672	Anolis_carolinensis
ENSCING00000006332	-	96	52.179	ENSANAG00000033513	HELQ	70	52.179	Aotus_nancymaae
ENSCING00000006332	-	96	50.960	ENSACLG00000010558	helq	93	50.960	Astatotilapia_calliptera
ENSCING00000006332	-	96	51.550	ENSAMXG00000012252	helq	79	51.680	Astyanax_mexicanus
ENSCING00000006332	-	96	51.667	ENSBTAG00000018151	HELQ	73	51.667	Bos_taurus
ENSCING00000006332	-	98	36.725	WBGene00021905	helq-1	85	36.849	Caenorhabditis_elegans
ENSCING00000006332	-	96	52.051	ENSCJAG00000005247	HELQ	70	52.051	Callithrix_jacchus
ENSCING00000006332	-	96	52.308	ENSCAFG00000009108	HELQ	72	52.308	Canis_familiaris
ENSCING00000006332	-	96	51.795	ENSCAFG00020010495	HELQ	78	51.795	Canis_lupus_dingo
ENSCING00000006332	-	96	52.179	ENSCHIG00000020128	HELQ	71	52.179	Capra_hircus
ENSCING00000006332	-	94	47.757	ENSTSYG00000012900	HELQ	70	47.757	Carlito_syrichta
ENSCING00000006332	-	96	51.282	ENSCPOG00000009180	HELQ	73	51.282	Cavia_porcellus
ENSCING00000006332	-	96	52.051	ENSCCAG00000036773	HELQ	70	52.051	Cebus_capucinus
ENSCING00000006332	-	96	52.179	ENSCATG00000034442	HELQ	70	52.179	Cercocebus_atys
ENSCING00000006332	-	96	51.795	ENSCLAG00000004733	HELQ	74	51.795	Chinchilla_lanigera
ENSCING00000006332	-	96	52.179	ENSCSAG00000004405	HELQ	70	52.179	Chlorocebus_sabaeus
ENSCING00000006332	-	96	52.113	ENSCPBG00000007787	HELQ	72	52.113	Chrysemys_picta_bellii
ENSCING00000006332	-	96	52.246	ENSCANG00000002407	HELQ	70	52.246	Colobus_angolensis_palliatus
ENSCING00000006332	-	96	52.314	ENSCGRG00001024451	Helq	75	52.314	Cricetulus_griseus_chok1gshd
ENSCING00000006332	-	96	52.314	ENSCGRG00000000309	Helq	77	52.314	Cricetulus_griseus_crigri
ENSCING00000006332	-	96	48.843	ENSCVAG00000020159	helq	81	48.843	Cyprinodon_variegatus
ENSCING00000006332	-	95	51.358	ENSDARG00000079818	helq	98	49.465	Danio_rerio
ENSCING00000006332	-	95	39.679	FBgn0002899	mus301	76	39.679	Drosophila_melanogaster
ENSCING00000006332	-	77	54.545	ENSETEG00000012220	HELQ	58	54.545	Echinops_telfairi
ENSCING00000006332	-	96	52.692	ENSEASG00005013248	HELQ	73	51.819	Equus_asinus_asinus
ENSCING00000006332	-	96	51.819	ENSECAG00000020717	HELQ	73	51.819	Equus_caballus
ENSCING00000006332	-	96	48.977	ENSELUG00000002083	helq	77	49.744	Esox_lucius
ENSCING00000006332	-	96	51.538	ENSFCAG00000009921	HELQ	73	51.538	Felis_catus
ENSCING00000006332	-	96	51.995	ENSFALG00000005255	HELQ	80	51.995	Ficedula_albicollis
ENSCING00000006332	-	94	51.239	ENSFDAG00000018169	HELQ	78	51.410	Fukomys_damarensis
ENSCING00000006332	-	96	51.160	ENSFHEG00000015542	helq	75	51.160	Fundulus_heteroclitus
ENSCING00000006332	-	96	49.227	ENSGMOG00000000020	helq	92	49.227	Gadus_morhua
ENSCING00000006332	-	96	52.320	ENSGALG00000011208	HELQ	73	52.320	Gallus_gallus
ENSCING00000006332	-	96	51.480	ENSGAFG00000008037	helq	75	51.480	Gambusia_affinis
ENSCING00000006332	-	96	49.679	ENSGACG00000001186	helq	99	50.329	Gasterosteus_aculeatus
ENSCING00000006332	-	96	52.497	ENSGAGG00000015134	HELQ	72	52.497	Gopherus_agassizii
ENSCING00000006332	-	96	52.051	ENSGGOG00000008598	HELQ	70	52.051	Gorilla_gorilla
ENSCING00000006332	-	96	51.484	ENSHBUG00000001997	helq	80	51.154	Haplochromis_burtoni
ENSCING00000006332	-	96	51.282	ENSHGLG00000019137	HELQ	74	51.282	Heterocephalus_glaber_female
ENSCING00000006332	-	96	51.282	ENSHGLG00100015489	HELQ	74	51.282	Heterocephalus_glaber_male
ENSCING00000006332	-	96	50.902	ENSIPUG00000003800	helq	77	50.902	Ictalurus_punctatus
ENSCING00000006332	-	96	51.285	ENSKMAG00000016486	helq	76	51.285	Kryptolebias_marmoratus
ENSCING00000006332	-	96	50.065	ENSLBEG00000021886	helq	76	50.065	Labrus_bergylta
ENSCING00000006332	-	96	54.615	ENSLACG00000010835	HELQ	74	54.615	Latimeria_chalumnae
ENSCING00000006332	-	96	51.876	ENSLOCG00000012099	helq	77	51.876	Lepisosteus_oculatus
ENSCING00000006332	-	96	51.282	ENSLAFG00000001056	HELQ	74	51.282	Loxodonta_africana
ENSCING00000006332	-	96	52.308	ENSMFAG00000040731	HELQ	70	52.308	Macaca_fascicularis
ENSCING00000006332	-	96	52.308	ENSMMUG00000015350	HELQ	70	52.308	Macaca_mulatta
ENSCING00000006332	-	96	52.179	ENSMNEG00000038829	HELQ	70	52.179	Macaca_nemestrina
ENSCING00000006332	-	96	47.564	ENSMLEG00000035125	HELQ	71	49.933	Mandrillus_leucophaeus
ENSCING00000006332	-	96	51.355	ENSMAMG00000012364	helq	75	51.355	Mastacembelus_armatus
ENSCING00000006332	-	96	51.613	ENSMZEG00005023270	helq	77	51.613	Maylandia_zebra
ENSCING00000006332	-	96	51.737	ENSMGAG00000008112	HELQ	77	51.737	Meleagris_gallopavo
ENSCING00000006332	-	85	57.294	ENSMAUG00000000249	Helq	74	57.294	Mesocricetus_auratus
ENSCING00000006332	-	96	51.476	ENSMOCG00000014354	Helq	72	51.476	Microtus_ochrogaster
ENSCING00000006332	-	96	51.933	ENSMMOG00000011313	helq	80	51.933	Mola_mola
ENSCING00000006332	-	96	51.724	ENSMODG00000020774	HELQ	71	51.724	Monodelphis_domestica
ENSCING00000006332	-	96	52.246	MGP_CAROLIEiJ_G0027457	Helq	72	52.246	Mus_caroli
ENSCING00000006332	-	96	52.246	ENSMUSG00000035266	Helq	72	52.246	Mus_musculus
ENSCING00000006332	-	94	52.418	MGP_PahariEiJ_G0017235	Helq	70	56.061	Mus_pahari
ENSCING00000006332	-	96	52.246	MGP_SPRETEiJ_G0028454	Helq	72	52.246	Mus_spretus
ENSCING00000006332	-	96	50.895	ENSMPUG00000014683	HELQ	81	50.895	Mustela_putorius_furo
ENSCING00000006332	-	96	51.145	ENSMLUG00000017053	HELQ	73	51.145	Myotis_lucifugus
ENSCING00000006332	-	96	51.923	ENSNLEG00000009088	HELQ	70	51.923	Nomascus_leucogenys
ENSCING00000006332	-	96	51.484	ENSONIG00000012532	helq	92	51.484	Oreochromis_niloticus
ENSCING00000006332	-	88	48.818	ENSOANG00000002113	-	98	48.818	Ornithorhynchus_anatinus
ENSCING00000006332	-	96	52.436	ENSOCUG00000013294	HELQ	73	52.436	Oryctolagus_cuniculus
ENSCING00000006332	-	96	50.904	ENSORLG00000022717	helq	78	50.968	Oryzias_latipes
ENSCING00000006332	-	96	50.904	ENSORLG00015006855	helq	80	50.968	Oryzias_latipes_hsok
ENSCING00000006332	-	96	51.226	ENSOMEG00000004983	helq	79	51.226	Oryzias_melastigma
ENSCING00000006332	-	96	44.615	ENSOGAG00000014188	HELQ	70	44.615	Otolemur_garnettii
ENSCING00000006332	-	96	52.308	ENSOARG00000002630	HELQ	73	52.308	Ovis_aries
ENSCING00000006332	-	96	51.795	ENSPPAG00000004520	HELQ	70	51.795	Pan_paniscus
ENSCING00000006332	-	96	51.410	ENSPPRG00000010520	HELQ	71	51.410	Panthera_pardus
ENSCING00000006332	-	96	51.282	ENSPTIG00000021394	HELQ	71	51.282	Panthera_tigris_altaica
ENSCING00000006332	-	96	51.923	ENSPTRG00000016232	HELQ	70	51.923	Pan_troglodytes
ENSCING00000006332	-	96	52.051	ENSPANG00000005130	HELQ	70	52.051	Papio_anubis
ENSCING00000006332	-	96	50.563	ENSPKIG00000021702	helq	76	50.563	Paramormyrops_kingsleyae
ENSCING00000006332	-	96	52.699	ENSPSIG00000015865	HELQ	77	52.699	Pelodiscus_sinensis
ENSCING00000006332	-	96	50.581	ENSPMGG00000002986	helq	79	50.581	Periophthalmus_magnuspinnatus
ENSCING00000006332	-	94	52.294	ENSPEMG00000007325	Helq	72	52.510	Peromyscus_maniculatus_bairdii
ENSCING00000006332	-	94	55.078	ENSPMAG00000004427	helq	100	54.414	Petromyzon_marinus
ENSCING00000006332	-	96	52.163	ENSPCIG00000019746	HELQ	77	52.163	Phascolarctos_cinereus
ENSCING00000006332	-	94	50.591	ENSPFOG00000002091	helq	75	50.591	Poecilia_formosa
ENSCING00000006332	-	96	50.965	ENSPLAG00000015199	helq	75	50.965	Poecilia_latipinna
ENSCING00000006332	-	96	50.708	ENSPMEG00000014496	helq	74	50.708	Poecilia_mexicana
ENSCING00000006332	-	96	50.839	ENSPREG00000012605	helq	75	50.839	Poecilia_reticulata
ENSCING00000006332	-	96	52.051	ENSPPYG00000014897	HELQ	70	52.051	Pongo_abelii
ENSCING00000006332	-	96	48.520	ENSPCAG00000004842	HELQ	70	48.520	Procavia_capensis
ENSCING00000006332	-	96	47.742	ENSPVAG00000006438	HELQ	69	47.742	Pteropus_vampyrus
ENSCING00000006332	-	83	51.407	ENSPNYG00000010575	helq	73	51.407	Pundamilia_nyererei
ENSCING00000006332	-	96	51.933	ENSPNAG00000009397	helq	81	51.933	Pygocentrus_nattereri
ENSCING00000006332	-	94	52.288	ENSRNOG00000002181	Helq	73	52.503	Rattus_norvegicus
ENSCING00000006332	-	96	52.375	ENSRBIG00000041497	HELQ	70	52.375	Rhinopithecus_bieti
ENSCING00000006332	-	96	52.246	ENSRROG00000045128	HELQ	70	52.246	Rhinopithecus_roxellana
ENSCING00000006332	-	96	52.179	ENSSBOG00000034314	HELQ	73	52.179	Saimiri_boliviensis_boliviensis
ENSCING00000006332	-	96	52.302	ENSSHAG00000006446	HELQ	74	52.302	Sarcophilus_harrisii
ENSCING00000006332	-	96	52.436	ENSSFOG00015019460	helq	87	52.436	Scleropages_formosus
ENSCING00000006332	-	96	50.839	ENSSDUG00000015665	helq	75	50.839	Seriola_dumerili
ENSCING00000006332	-	96	51.866	ENSSARG00000013932	HELQ	84	51.866	Sorex_araneus
ENSCING00000006332	-	95	48.582	ENSSPAG00000008705	helq	77	48.582	Stegastes_partitus
ENSCING00000006332	-	96	52.273	ENSSSCG00000009236	HELQ	71	58.140	Sus_scrofa
ENSCING00000006332	-	96	52.124	ENSTGUG00000002154	HELQ	77	52.124	Taeniopygia_guttata
ENSCING00000006332	-	96	50.839	ENSTRUG00000018644	helq	76	50.839	Takifugu_rubripes
ENSCING00000006332	-	96	50.581	ENSTNIG00000005673	helq	91	52.308	Tetraodon_nigroviridis
ENSCING00000006332	-	96	51.671	ENSTTRG00000004895	HELQ	70	51.671	Tursiops_truncatus
ENSCING00000006332	-	96	51.535	ENSUAMG00000012816	HELQ	71	51.535	Ursus_americanus
ENSCING00000006332	-	96	51.538	ENSUMAG00000008823	HELQ	73	51.538	Ursus_maritimus
ENSCING00000006332	-	93	51.523	ENSVPAG00000011357	HELQ	71	51.523	Vicugna_pacos
ENSCING00000006332	-	96	52.179	ENSVVUG00000015676	HELQ	73	52.179	Vulpes_vulpes
ENSCING00000006332	-	96	50.837	ENSXETG00000001831	helq	92	50.837	Xenopus_tropicalis
ENSCING00000006332	-	96	49.488	ENSXCOG00000016210	helq	93	50.128	Xiphophorus_couchianus
ENSCING00000006332	-	96	49.488	ENSXMAG00000012563	helq	93	50.128	Xiphophorus_maculatus