EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006565 (Gene tree)
Gene ID: 100175470
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5801 bases
Position: chr9:1012412-1018212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013541	HA2	PF04408.23	3.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013541	-	1834	-	ENSCINP00000013541	545 (aa)	-	F6QVH1

Gene Model

Click here to download ENSCING00000006565's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006565	-	100	77.839	ENSG00000204560	DHX16	95	76.822	Homo_sapiens
ENSCING00000006565	-	100	81.868	ENSAPOG00000008825	dhx16	54	81.868	Acanthochromis_polyacanthus
ENSCING00000006565	-	100	78.205	ENSAMEG00000013213	DHX16	52	78.205	Ailuropoda_melanoleuca
ENSCING00000006565	-	100	81.502	ENSACIG00000021825	dhx16	53	81.502	Amphilophus_citrinellus
ENSCING00000006565	-	100	81.868	ENSAOCG00000024217	dhx16	52	81.868	Amphiprion_ocellaris
ENSCING00000006565	-	100	77.656	ENSAPEG00000022508	dhx16	52	77.656	Amphiprion_percula
ENSCING00000006565	-	100	81.868	ENSATEG00000006665	dhx16	52	81.868	Anabas_testudineus
ENSCING00000006565	-	99	81.651	ENSACAG00000010952	DHX16	51	81.651	Anolis_carolinensis
ENSCING00000006565	-	100	78.022	ENSANAG00000024212	DHX16	95	77.009	Aotus_nancymaae
ENSCING00000006565	-	100	81.502	ENSACLG00000010932	dhx16	56	81.502	Astatotilapia_calliptera
ENSCING00000006565	-	100	83.333	ENSAMXG00000005181	dhx16	54	83.333	Astyanax_mexicanus
ENSCING00000006565	-	100	78.388	ENSBTAG00000006960	DHX16	52	78.388	Bos_taurus
ENSCING00000006565	-	99	72.761	WBGene00003392	mog-4	54	72.761	Caenorhabditis_elegans
ENSCING00000006565	-	100	77.839	ENSCJAG00000019914	DHX16	94	77.419	Callithrix_jacchus
ENSCING00000006565	-	100	78.205	ENSCAFG00000000427	DHX16	52	78.205	Canis_familiaris
ENSCING00000006565	-	100	78.205	ENSCAFG00020017623	DHX16	96	77.947	Canis_lupus_dingo
ENSCING00000006565	-	100	76.386	ENSCHIG00000013356	DHX16	53	76.386	Capra_hircus
ENSCING00000006565	-	100	77.839	ENSTSYG00000029805	DHX16	98	76.866	Carlito_syrichta
ENSCING00000006565	-	100	78.205	ENSCAPG00000000092	DHX16	54	78.205	Cavia_aperea
ENSCING00000006565	-	100	78.205	ENSCPOG00000015415	DHX16	52	78.205	Cavia_porcellus
ENSCING00000006565	-	100	77.839	ENSCCAG00000025435	DHX16	94	77.567	Cebus_capucinus
ENSCING00000006565	-	100	77.839	ENSCATG00000021666	DHX16	98	76.007	Cercocebus_atys
ENSCING00000006565	-	100	78.022	ENSCLAG00000002398	DHX16	56	78.022	Chinchilla_lanigera
ENSCING00000006565	-	100	77.839	ENSCSAG00000008258	DHX16	52	77.839	Chlorocebus_sabaeus
ENSCING00000006565	-	100	69.231	ENSCHOG00000001224	DHX16	65	69.231	Choloepus_hoffmanni
ENSCING00000006565	-	100	82.234	ENSCPBG00000018837	DHX16	52	82.234	Chrysemys_picta_bellii
ENSCING00000006565	-	100	95.963	ENSCSAVG00000003870	-	63	95.963	Ciona_savignyi
ENSCING00000006565	-	100	77.656	ENSCANG00000043736	DHX16	94	77.419	Colobus_angolensis_palliatus
ENSCING00000006565	-	100	78.022	ENSCGRG00001008329	Dhx16	52	78.022	Cricetulus_griseus_chok1gshd
ENSCING00000006565	-	100	75.906	ENSCGRG00000014687	Dhx16	54	75.906	Cricetulus_griseus_crigri
ENSCING00000006565	-	100	81.136	ENSCSEG00000012134	dhx16	52	81.136	Cynoglossus_semilaevis
ENSCING00000006565	-	100	82.784	ENSDARG00000013150	dhx16	52	82.784	Danio_rerio
ENSCING00000006565	-	100	78.022	ENSDORG00000003203	Dhx16	55	78.022	Dipodomys_ordii
ENSCING00000006565	-	99	76.753	FBgn0086444	l(2)37Cb	61	76.753	Drosophila_melanogaster
ENSCING00000006565	-	100	78.022	ENSETEG00000003121	DHX16	54	78.022	Echinops_telfairi
ENSCING00000006565	-	92	81.746	ENSEBUG00000001802	dhx16	50	81.746	Eptatretus_burgeri
ENSCING00000006565	-	100	78.205	ENSEASG00005019124	DHX16	95	77.989	Equus_asinus_asinus
ENSCING00000006565	-	100	78.205	ENSECAG00000008537	DHX16	52	78.205	Equus_caballus
ENSCING00000006565	-	100	82.051	ENSELUG00000015727	dhx16	52	82.051	Esox_lucius
ENSCING00000006565	-	100	78.205	ENSFCAG00000007693	DHX16	52	78.205	Felis_catus
ENSCING00000006565	-	100	78.205	ENSFDAG00000017458	DHX16	56	78.205	Fukomys_damarensis
ENSCING00000006565	-	100	82.051	ENSFHEG00000021509	dhx16	52	82.051	Fundulus_heteroclitus
ENSCING00000006565	-	99	79.633	ENSGMOG00000009282	dhx16	52	79.633	Gadus_morhua
ENSCING00000006565	-	100	82.051	ENSGAFG00000014389	dhx16	52	82.051	Gambusia_affinis
ENSCING00000006565	-	100	81.685	ENSGACG00000001768	dhx16	60	81.685	Gasterosteus_aculeatus
ENSCING00000006565	-	100	82.234	ENSGAGG00000003115	DHX16	57	82.234	Gopherus_agassizii
ENSCING00000006565	-	100	77.839	ENSGGOG00000022943	DHX16	95	76.822	Gorilla_gorilla
ENSCING00000006565	-	100	75.868	ENSHBUG00000009952	dhx16	51	75.868	Haplochromis_burtoni
ENSCING00000006565	-	100	78.388	ENSHGLG00000019290	DHX16	52	78.388	Heterocephalus_glaber_female
ENSCING00000006565	-	100	78.571	ENSHGLG00100017127	DHX16	52	78.571	Heterocephalus_glaber_male
ENSCING00000006565	-	100	80.037	ENSHCOG00000006805	dhx16	52	80.037	Hippocampus_comes
ENSCING00000006565	-	100	81.319	ENSIPUG00000001025	DHX16	52	81.319	Ictalurus_punctatus
ENSCING00000006565	-	100	78.022	ENSSTOG00000011881	DHX16	52	78.022	Ictidomys_tridecemlineatus
ENSCING00000006565	-	100	78.022	ENSJJAG00000000186	Dhx16	56	78.022	Jaculus_jaculus
ENSCING00000006565	-	100	82.051	ENSKMAG00000009246	dhx16	55	82.051	Kryptolebias_marmoratus
ENSCING00000006565	-	100	78.938	ENSLBEG00000017249	dhx16	52	79.015	Labrus_bergylta
ENSCING00000006565	-	100	70.863	ENSLACG00000002450	DHX16	91	71.043	Latimeria_chalumnae
ENSCING00000006565	-	100	78.022	ENSLAFG00000026904	DHX16	52	78.022	Loxodonta_africana
ENSCING00000006565	-	100	77.839	ENSMFAG00000003575	DHX16	95	77.609	Macaca_fascicularis
ENSCING00000006565	-	100	77.839	ENSMMUG00000019960	DHX16	96	77.419	Macaca_mulatta
ENSCING00000006565	-	100	77.839	ENSMNEG00000014580	DHX16	95	77.609	Macaca_nemestrina
ENSCING00000006565	-	100	77.839	ENSMLEG00000043805	DHX16	95	77.609	Mandrillus_leucophaeus
ENSCING00000006565	-	100	81.502	ENSMAMG00000009784	dhx16	52	81.502	Mastacembelus_armatus
ENSCING00000006565	-	100	81.502	ENSMZEG00005027755	dhx16	52	81.502	Maylandia_zebra
ENSCING00000006565	-	100	78.022	ENSMAUG00000001696	Dhx16	52	78.022	Mesocricetus_auratus
ENSCING00000006565	-	100	78.022	ENSMICG00000014819	DHX16	95	77.609	Microcebus_murinus
ENSCING00000006565	-	100	78.022	ENSMOCG00000010715	Dhx16	52	78.022	Microtus_ochrogaster
ENSCING00000006565	-	100	79.670	ENSMMOG00000016621	dhx16	53	79.670	Mola_mola
ENSCING00000006565	-	100	77.839	ENSMODG00000015890	DHX16	61	77.839	Monodelphis_domestica
ENSCING00000006565	-	100	81.502	ENSMALG00000003384	dhx16	53	81.502	Monopterus_albus
ENSCING00000006565	-	100	78.022	MGP_CAROLIEiJ_G0021538	Dhx16	56	78.022	Mus_caroli
ENSCING00000006565	-	100	78.022	ENSMUSG00000024422	Dhx16	52	78.022	Mus_musculus
ENSCING00000006565	-	100	78.022	MGP_PahariEiJ_G0020532	Dhx16	52	78.022	Mus_pahari
ENSCING00000006565	-	100	72.894	MGP_SPRETEiJ_G0022445	Dhx16	51	72.894	Mus_spretus
ENSCING00000006565	-	100	78.205	ENSMLUG00000008932	DHX16	53	78.205	Myotis_lucifugus
ENSCING00000006565	-	100	78.205	ENSNGAG00000001106	Dhx16	52	78.205	Nannospalax_galili
ENSCING00000006565	-	100	81.685	ENSNBRG00000005624	dhx16	52	81.685	Neolamprologus_brichardi
ENSCING00000006565	-	100	77.473	ENSNLEG00000005270	DHX16	95	76.822	Nomascus_leucogenys
ENSCING00000006565	-	100	78.205	ENSOPRG00000001864	DHX16	52	78.205	Ochotona_princeps
ENSCING00000006565	-	97	77.694	ENSODEG00000017885	DHX16	99	77.694	Octodon_degus
ENSCING00000006565	-	100	81.421	ENSONIG00000002234	dhx16	52	81.421	Oreochromis_niloticus
ENSCING00000006565	-	100	78.022	ENSOCUG00000002163	DHX16	52	78.022	Oryctolagus_cuniculus
ENSCING00000006565	-	100	82.234	ENSORLG00000015982	dhx16	99	81.818	Oryzias_latipes
ENSCING00000006565	-	100	82.234	ENSORLG00020014134	dhx16	53	82.234	Oryzias_latipes_hni
ENSCING00000006565	-	100	82.234	ENSORLG00015020617	dhx16	98	81.939	Oryzias_latipes_hsok
ENSCING00000006565	-	100	81.868	ENSOMEG00000019560	dhx16	52	81.868	Oryzias_melastigma
ENSCING00000006565	-	100	78.022	ENSOGAG00000008300	DHX16	52	78.022	Otolemur_garnettii
ENSCING00000006565	-	100	78.205	ENSOARG00000012046	DHX16	53	78.205	Ovis_aries
ENSCING00000006565	-	100	77.839	ENSPPAG00000025169	DHX16	95	76.822	Pan_paniscus
ENSCING00000006565	-	100	78.205	ENSPPRG00000000329	DHX16	52	78.205	Panthera_pardus
ENSCING00000006565	-	100	78.205	ENSPTIG00000010694	DHX16	52	78.205	Panthera_tigris_altaica
ENSCING00000006565	-	100	77.839	ENSPTRG00000017935	DHX16	95	76.822	Pan_troglodytes
ENSCING00000006565	-	97	77.609	ENSPANG00000018482	DHX16	95	77.609	Papio_anubis
ENSCING00000006565	-	100	81.319	ENSPKIG00000012693	dhx16	52	81.319	Paramormyrops_kingsleyae
ENSCING00000006565	-	100	71.978	ENSPSIG00000012007	DHX16	52	72.029	Pelodiscus_sinensis
ENSCING00000006565	-	100	81.685	ENSPMGG00000000154	dhx16	53	81.685	Periophthalmus_magnuspinnatus
ENSCING00000006565	-	100	78.022	ENSPEMG00000017508	Dhx16	52	78.022	Peromyscus_maniculatus_bairdii
ENSCING00000006565	-	100	77.839	ENSPCIG00000014991	DHX16	52	77.839	Phascolarctos_cinereus
ENSCING00000006565	-	100	82.234	ENSPFOG00000002575	dhx16	52	82.234	Poecilia_formosa
ENSCING00000006565	-	100	82.418	ENSPLAG00000014305	dhx16	52	82.418	Poecilia_latipinna
ENSCING00000006565	-	100	82.234	ENSPMEG00000006632	dhx16	54	82.234	Poecilia_mexicana
ENSCING00000006565	-	100	82.051	ENSPREG00000003371	dhx16	53	82.051	Poecilia_reticulata
ENSCING00000006565	-	100	77.656	ENSPPYG00000016415	DHX16	52	77.656	Pongo_abelii
ENSCING00000006565	-	100	71.062	ENSPCAG00000017034	DHX16	52	71.062	Procavia_capensis
ENSCING00000006565	-	100	77.839	ENSPCOG00000013298	DHX16	95	77.567	Propithecus_coquereli
ENSCING00000006565	-	100	78.205	ENSPVAG00000003984	DHX16	52	78.205	Pteropus_vampyrus
ENSCING00000006565	-	100	81.502	ENSPNYG00000018755	dhx16	56	81.502	Pundamilia_nyererei
ENSCING00000006565	-	100	82.418	ENSPNAG00000018065	dhx16	52	82.418	Pygocentrus_nattereri
ENSCING00000006565	-	100	78.022	ENSRNOG00000030157	Dhx16	52	78.022	Rattus_norvegicus
ENSCING00000006565	-	100	77.839	ENSRBIG00000039655	DHX16	94	77.609	Rhinopithecus_bieti
ENSCING00000006565	-	100	77.839	ENSRROG00000031909	DHX16	94	77.609	Rhinopithecus_roxellana
ENSCING00000006565	-	96	50.273	YNR011C	PRP2	62	50.273	Saccharomyces_cerevisiae
ENSCING00000006565	-	100	77.656	ENSSBOG00000020142	DHX16	95	76.636	Saimiri_boliviensis_boliviensis
ENSCING00000006565	-	100	78.022	ENSSHAG00000007234	DHX16	52	78.022	Sarcophilus_harrisii
ENSCING00000006565	-	100	81.685	ENSSFOG00015019853	dhx16	51	81.685	Scleropages_formosus
ENSCING00000006565	-	100	82.234	ENSSDUG00000006948	dhx16	52	82.234	Seriola_dumerili
ENSCING00000006565	-	100	82.234	ENSSLDG00000012742	dhx16	52	82.234	Seriola_lalandi_dorsalis
ENSCING00000006565	-	100	81.319	ENSSPUG00000015145	DHX16	52	81.319	Sphenodon_punctatus
ENSCING00000006565	-	100	81.685	ENSSPAG00000012416	dhx16	52	81.685	Stegastes_partitus
ENSCING00000006565	-	100	78.205	ENSSSCG00000001376	DHX16	52	78.205	Sus_scrofa
ENSCING00000006565	-	100	81.136	ENSTRUG00000004927	dhx16	52	81.136	Takifugu_rubripes
ENSCING00000006565	-	100	81.136	ENSTNIG00000011641	dhx16	53	81.136	Tetraodon_nigroviridis
ENSCING00000006565	-	100	78.205	ENSTTRG00000008323	DHX16	52	78.205	Tursiops_truncatus
ENSCING00000006565	-	100	78.205	ENSUAMG00000026299	DHX16	99	77.947	Ursus_americanus
ENSCING00000006565	-	100	78.388	ENSVVUG00000009831	DHX16	52	78.388	Vulpes_vulpes
ENSCING00000006565	-	99	77.491	ENSXETG00000024069	dhx16	56	77.491	Xenopus_tropicalis
ENSCING00000006565	-	92	82.341	ENSXCOG00000003774	dhx16	50	82.341	Xiphophorus_couchianus
ENSCING00000006565	-	100	81.868	ENSXMAG00000013293	dhx16	53	81.868	Xiphophorus_maculatus