EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006610 (Gene tree)
Gene ID: 100180799
Gene Symbol: -
Alias: -
Full Name: 60S ribosome subunit biogenesis protein NIP7 homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1449 bases
Position: chr9:6059096-6060544
Accession: 100180799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013578	UPF0113	PF03657.13	6.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013578	-	817	XM_002131684	ENSCINP00000013578	180 (aa)	XP_002131720	F6QQ08

Gene Model

Click here to download ENSCING00000006610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006610	-	100	73.889	ENSG00000132603	NIP7	94	81.818	Homo_sapiens
ENSCING00000006610	-	100	75.000	ENSAPOG00000005901	nip7	100	75.000	Acanthochromis_polyacanthus
ENSCING00000006610	-	100	73.333	ENSAMEG00000007542	NIP7	100	73.333	Ailuropoda_melanoleuca
ENSCING00000006610	-	100	75.000	ENSAOCG00000017498	nip7	100	75.000	Amphiprion_ocellaris
ENSCING00000006610	-	100	75.000	ENSAPEG00000002824	nip7	100	75.000	Amphiprion_percula
ENSCING00000006610	-	100	75.000	ENSATEG00000019165	nip7	100	75.000	Anabas_testudineus
ENSCING00000006610	-	100	76.667	ENSACAG00000003476	NIP7	100	76.667	Anolis_carolinensis
ENSCING00000006610	-	100	74.444	ENSANAG00000037006	NIP7	100	74.444	Aotus_nancymaae
ENSCING00000006610	-	100	75.000	ENSACLG00000012368	nip7	100	75.000	Astatotilapia_calliptera
ENSCING00000006610	-	100	77.222	ENSAMXG00000003634	nip7	100	65.000	Astyanax_mexicanus
ENSCING00000006610	-	100	73.333	ENSBTAG00000001666	NIP7	100	73.333	Bos_taurus
ENSCING00000006610	-	99	60.894	WBGene00016607	C43E11.9	99	60.894	Caenorhabditis_elegans
ENSCING00000006610	-	100	74.444	ENSCJAG00000015364	NIP7	100	74.444	Callithrix_jacchus
ENSCING00000006610	-	100	72.222	ENSCAFG00000029835	NIP7	95	72.222	Canis_familiaris
ENSCING00000006610	-	100	73.889	ENSCHIG00000019332	-	100	73.889	Capra_hircus
ENSCING00000006610	-	100	72.222	ENSTSYG00000032526	NIP7	100	72.222	Carlito_syrichta
ENSCING00000006610	-	100	73.333	ENSCPOG00000003712	NIP7	100	73.333	Cavia_porcellus
ENSCING00000006610	-	100	74.444	ENSCCAG00000023481	NIP7	100	74.444	Cebus_capucinus
ENSCING00000006610	-	100	52.778	ENSCATG00000006216	-	80	52.778	Cercocebus_atys
ENSCING00000006610	-	100	74.444	ENSCATG00000031010	NIP7	100	74.444	Cercocebus_atys
ENSCING00000006610	-	100	71.667	ENSCLAG00000007579	NIP7	100	71.667	Chinchilla_lanigera
ENSCING00000006610	-	100	48.913	ENSCSAG00000015707	-	100	48.913	Chlorocebus_sabaeus
ENSCING00000006610	-	100	75.000	ENSCSAG00000004137	NIP7	100	75.000	Chlorocebus_sabaeus
ENSCING00000006610	-	100	66.111	ENSCHOG00000010787	NIP7	99	66.111	Choloepus_hoffmanni
ENSCING00000006610	-	100	75.556	ENSCPBG00000027051	NIP7	100	75.556	Chrysemys_picta_bellii
ENSCING00000006610	-	100	95.000	ENSCSAVG00000009157	-	100	95.000	Ciona_savignyi
ENSCING00000006610	-	100	74.444	ENSCANG00000029815	NIP7	100	74.444	Colobus_angolensis_palliatus
ENSCING00000006610	-	98	59.322	ENSCGRG00001020027	-	95	59.322	Cricetulus_griseus_chok1gshd
ENSCING00000006610	-	100	66.667	ENSCGRG00001010780	-	100	66.667	Cricetulus_griseus_chok1gshd
ENSCING00000006610	-	100	73.889	ENSCGRG00001008966	-	100	73.889	Cricetulus_griseus_chok1gshd
ENSCING00000006610	-	100	66.111	ENSCGRG00000000567	-	100	66.111	Cricetulus_griseus_crigri
ENSCING00000006610	-	92	61.212	ENSCGRG00000007805	-	100	61.212	Cricetulus_griseus_crigri
ENSCING00000006610	-	100	73.889	ENSCGRG00000001344	-	100	73.889	Cricetulus_griseus_crigri
ENSCING00000006610	-	100	75.556	ENSCSEG00000011356	nip7	100	75.556	Cynoglossus_semilaevis
ENSCING00000006610	-	100	74.444	ENSCVAG00000012170	nip7	100	74.444	Cyprinodon_variegatus
ENSCING00000006610	-	100	76.667	ENSDARG00000059075	nip7	100	76.667	Danio_rerio
ENSCING00000006610	-	100	73.333	ENSDNOG00000006821	NIP7	100	73.333	Dasypus_novemcinctus
ENSCING00000006610	-	100	72.778	ENSDORG00000027163	Nip7	100	72.778	Dipodomys_ordii
ENSCING00000006610	-	99	63.128	FBgn0039233	CG7006	99	63.128	Drosophila_melanogaster
ENSCING00000006610	-	100	73.333	ENSETEG00000013549	NIP7	100	73.333	Echinops_telfairi
ENSCING00000006610	-	100	68.889	ENSEBUG00000015270	nip7	100	68.889	Eptatretus_burgeri
ENSCING00000006610	-	100	73.333	ENSEASG00005021312	NIP7	100	73.333	Equus_asinus_asinus
ENSCING00000006610	-	100	73.333	ENSECAG00000036727	NIP7	100	73.333	Equus_caballus
ENSCING00000006610	-	100	72.778	ENSEEUG00000008660	NIP7	100	72.778	Erinaceus_europaeus
ENSCING00000006610	-	100	73.333	ENSFCAG00000013574	NIP7	100	73.333	Felis_catus
ENSCING00000006610	-	89	72.050	ENSFALG00000002761	NIP7	100	72.050	Ficedula_albicollis
ENSCING00000006610	-	100	72.222	ENSFDAG00000015970	NIP7	100	72.222	Fukomys_damarensis
ENSCING00000006610	-	100	62.162	ENSFHEG00000008752	nip7	100	62.162	Fundulus_heteroclitus
ENSCING00000006610	-	91	73.171	ENSGMOG00000005786	nip7	95	73.171	Gadus_morhua
ENSCING00000006610	-	100	72.222	ENSGALG00000000650	NIP7	100	72.222	Gallus_gallus
ENSCING00000006610	-	100	75.556	ENSGAFG00000009138	nip7	100	75.556	Gambusia_affinis
ENSCING00000006610	-	100	76.111	ENSGACG00000016301	nip7	100	76.111	Gasterosteus_aculeatus
ENSCING00000006610	-	82	75.676	ENSGAGG00000000314	NIP7	100	75.676	Gopherus_agassizii
ENSCING00000006610	-	100	57.778	ENSGGOG00000007747	-	100	57.778	Gorilla_gorilla
ENSCING00000006610	-	100	73.889	ENSGGOG00000022785	NIP7	100	73.889	Gorilla_gorilla
ENSCING00000006610	-	100	75.000	ENSHBUG00000020049	nip7	100	75.000	Haplochromis_burtoni
ENSCING00000006610	-	100	72.778	ENSHGLG00000017478	NIP7	100	72.778	Heterocephalus_glaber_female
ENSCING00000006610	-	100	72.778	ENSHGLG00100005353	NIP7	100	72.778	Heterocephalus_glaber_male
ENSCING00000006610	-	100	73.889	ENSHCOG00000018004	nip7	100	73.889	Hippocampus_comes
ENSCING00000006610	-	100	78.333	ENSIPUG00000007516	nip7	100	78.333	Ictalurus_punctatus
ENSCING00000006610	-	100	72.778	ENSSTOG00000012871	NIP7	100	72.778	Ictidomys_tridecemlineatus
ENSCING00000006610	-	99	64.246	ENSJJAG00000017333	-	100	64.246	Jaculus_jaculus
ENSCING00000006610	-	96	73.410	ENSJJAG00000018787	-	99	73.494	Jaculus_jaculus
ENSCING00000006610	-	100	55.000	ENSJJAG00000001553	-	100	55.000	Jaculus_jaculus
ENSCING00000006610	-	100	75.556	ENSKMAG00000018713	nip7	100	75.556	Kryptolebias_marmoratus
ENSCING00000006610	-	100	74.444	ENSLBEG00000005274	nip7	100	74.444	Labrus_bergylta
ENSCING00000006610	-	100	76.667	ENSLACG00000006594	NIP7	100	76.667	Latimeria_chalumnae
ENSCING00000006610	-	100	75.556	ENSLOCG00000001379	nip7	100	75.556	Lepisosteus_oculatus
ENSCING00000006610	-	100	72.778	ENSLAFG00000004830	NIP7	100	72.778	Loxodonta_africana
ENSCING00000006610	-	100	68.889	ENSMFAG00000013965	-	100	68.889	Macaca_fascicularis
ENSCING00000006610	-	100	74.444	ENSMFAG00000046374	NIP7	100	74.444	Macaca_fascicularis
ENSCING00000006610	-	84	59.211	ENSMFAG00000002077	-	100	59.211	Macaca_fascicularis
ENSCING00000006610	-	50	75.556	ENSMMUG00000016635	-	79	75.556	Macaca_mulatta
ENSCING00000006610	-	100	53.889	ENSMMUG00000043208	-	80	53.889	Macaca_mulatta
ENSCING00000006610	-	100	68.333	ENSMMUG00000046403	-	100	68.333	Macaca_mulatta
ENSCING00000006610	-	100	74.444	ENSMNEG00000037905	NIP7	100	74.444	Macaca_nemestrina
ENSCING00000006610	-	97	63.277	ENSMLEG00000037105	-	96	63.277	Mandrillus_leucophaeus
ENSCING00000006610	-	100	74.444	ENSMLEG00000042389	NIP7	100	74.444	Mandrillus_leucophaeus
ENSCING00000006610	-	84	57.895	ENSMLEG00000030257	-	100	57.895	Mandrillus_leucophaeus
ENSCING00000006610	-	100	76.667	ENSMAMG00000020375	nip7	100	76.667	Mastacembelus_armatus
ENSCING00000006610	-	100	75.000	ENSMZEG00005009767	nip7	100	75.000	Maylandia_zebra
ENSCING00000006610	-	89	72.050	ENSMGAG00000008556	NIP7	100	72.050	Meleagris_gallopavo
ENSCING00000006610	-	100	73.333	ENSMAUG00000019255	Nip7	100	73.333	Mesocricetus_auratus
ENSCING00000006610	-	100	72.778	ENSMICG00000009664	NIP7	100	72.778	Microcebus_murinus
ENSCING00000006610	-	100	73.889	ENSMOCG00000020110	Nip7	100	73.889	Microtus_ochrogaster
ENSCING00000006610	-	100	68.333	ENSMMOG00000000657	nip7	100	68.333	Mola_mola
ENSCING00000006610	-	99	74.860	ENSMODG00000002782	NIP7	99	74.860	Monodelphis_domestica
ENSCING00000006610	-	100	75.556	ENSMALG00000008166	nip7	100	75.556	Monopterus_albus
ENSCING00000006610	-	100	73.333	MGP_CAROLIEiJ_G0031530	Nip7	100	73.333	Mus_caroli
ENSCING00000006610	-	100	73.333	ENSMUSG00000031917	Nip7	100	73.333	Mus_musculus
ENSCING00000006610	-	100	73.889	MGP_PahariEiJ_G0023130	Nip7	100	73.889	Mus_pahari
ENSCING00000006610	-	100	73.333	MGP_SPRETEiJ_G0032648	Nip7	100	73.333	Mus_spretus
ENSCING00000006610	-	100	72.778	ENSMLUG00000011835	NIP7	100	72.778	Myotis_lucifugus
ENSCING00000006610	-	99	56.425	ENSNGAG00000012129	-	91	56.425	Nannospalax_galili
ENSCING00000006610	-	100	72.222	ENSNGAG00000006098	Nip7	100	72.222	Nannospalax_galili
ENSCING00000006610	-	100	75.000	ENSNBRG00000001950	nip7	100	75.000	Neolamprologus_brichardi
ENSCING00000006610	-	100	72.778	ENSNLEG00000005492	NIP7	100	72.778	Nomascus_leucogenys
ENSCING00000006610	-	99	72.067	ENSMEUG00000002818	NIP7	99	72.067	Notamacropus_eugenii
ENSCING00000006610	-	100	72.778	ENSOPRG00000006981	NIP7	100	72.778	Ochotona_princeps
ENSCING00000006610	-	100	73.333	ENSODEG00000014849	-	100	73.333	Octodon_degus
ENSCING00000006610	-	100	65.000	ENSODEG00000000559	-	100	65.000	Octodon_degus
ENSCING00000006610	-	100	75.000	ENSONIG00000017181	nip7	100	75.000	Oreochromis_niloticus
ENSCING00000006610	-	100	73.333	ENSOCUG00000017652	NIP7	100	73.333	Oryctolagus_cuniculus
ENSCING00000006610	-	100	75.556	ENSORLG00000011734	nip7	100	75.556	Oryzias_latipes
ENSCING00000006610	-	100	75.556	ENSORLG00020002338	nip7	100	75.556	Oryzias_latipes_hni
ENSCING00000006610	-	100	75.556	ENSORLG00015001005	nip7	100	75.556	Oryzias_latipes_hsok
ENSCING00000006610	-	100	75.556	ENSOMEG00000011688	nip7	100	75.556	Oryzias_melastigma
ENSCING00000006610	-	100	73.333	ENSOGAG00000008066	NIP7	100	73.333	Otolemur_garnettii
ENSCING00000006610	-	100	73.889	ENSOARG00000003558	NIP7	100	73.889	Ovis_aries
ENSCING00000006610	-	100	73.889	ENSPPAG00000000218	NIP7	100	73.889	Pan_paniscus
ENSCING00000006610	-	100	58.333	ENSPPAG00000006091	-	100	58.333	Pan_paniscus
ENSCING00000006610	-	100	73.333	ENSPPRG00000009719	NIP7	100	73.333	Panthera_pardus
ENSCING00000006610	-	100	73.333	ENSPTIG00000010113	NIP7	100	73.333	Panthera_tigris_altaica
ENSCING00000006610	-	100	58.333	ENSPTRG00000051330	-	100	58.333	Pan_troglodytes
ENSCING00000006610	-	100	73.889	ENSPTRG00000051089	NIP7	100	73.889	Pan_troglodytes
ENSCING00000006610	-	100	74.444	ENSPANG00000033665	-	100	74.444	Papio_anubis
ENSCING00000006610	-	100	56.667	ENSPANG00000035982	-	100	56.667	Papio_anubis
ENSCING00000006610	-	100	52.778	ENSPANG00000029979	-	80	52.778	Papio_anubis
ENSCING00000006610	-	100	75.556	ENSPKIG00000020345	nip7	76	75.556	Paramormyrops_kingsleyae
ENSCING00000006610	-	89	75.776	ENSPSIG00000011210	NIP7	99	75.776	Pelodiscus_sinensis
ENSCING00000006610	-	100	73.333	ENSPEMG00000011304	Nip7	100	73.333	Peromyscus_maniculatus_bairdii
ENSCING00000006610	-	99	74.302	ENSPCIG00000012768	NIP7	99	74.302	Phascolarctos_cinereus
ENSCING00000006610	-	100	75.000	ENSPFOG00000014985	nip7	100	75.000	Poecilia_formosa
ENSCING00000006610	-	100	75.000	ENSPLAG00000005031	nip7	100	75.000	Poecilia_latipinna
ENSCING00000006610	-	100	75.000	ENSPMEG00000008213	nip7	100	75.000	Poecilia_mexicana
ENSCING00000006610	-	100	73.889	ENSPPYG00000007503	NIP7	100	73.889	Pongo_abelii
ENSCING00000006610	-	100	73.333	ENSPCOG00000011060	NIP7	100	73.333	Propithecus_coquereli
ENSCING00000006610	-	100	72.778	ENSPVAG00000015980	NIP7	100	72.778	Pteropus_vampyrus
ENSCING00000006610	-	100	75.000	ENSPNYG00000018316	nip7	100	75.000	Pundamilia_nyererei
ENSCING00000006610	-	100	76.667	ENSPNAG00000027680	nip7	100	65.556	Pygocentrus_nattereri
ENSCING00000006610	-	100	73.333	ENSRNOG00000020391	Nip7	100	73.333	Rattus_norvegicus
ENSCING00000006610	-	95	61.494	ENSRBIG00000033803	-	98	61.494	Rhinopithecus_bieti
ENSCING00000006610	-	95	70.760	ENSRBIG00000039934	-	100	70.760	Rhinopithecus_bieti
ENSCING00000006610	-	100	73.889	ENSRROG00000026840	NIP7	100	73.889	Rhinopithecus_roxellana
ENSCING00000006610	-	100	49.444	ENSRROG00000044739	-	78	49.444	Rhinopithecus_roxellana
ENSCING00000006610	-	99	58.101	YPL211W	-	99	58.101	Saccharomyces_cerevisiae
ENSCING00000006610	-	100	74.444	ENSSBOG00000027548	NIP7	100	74.444	Saimiri_boliviensis_boliviensis
ENSCING00000006610	-	100	76.667	ENSSFOG00015008579	nip7	100	76.667	Scleropages_formosus
ENSCING00000006610	-	100	74.444	ENSSMAG00000006217	nip7	100	74.444	Scophthalmus_maximus
ENSCING00000006610	-	100	75.000	ENSSDUG00000002698	nip7	100	75.000	Seriola_dumerili
ENSCING00000006610	-	100	75.000	ENSSLDG00000005153	nip7	100	75.000	Seriola_lalandi_dorsalis
ENSCING00000006610	-	100	74.444	ENSSARG00000000303	NIP7	100	74.444	Sorex_araneus
ENSCING00000006610	-	100	73.333	ENSSPUG00000005858	NIP7	100	73.333	Sphenodon_punctatus
ENSCING00000006610	-	100	75.000	ENSSPAG00000017699	nip7	100	75.000	Stegastes_partitus
ENSCING00000006610	-	100	72.778	ENSSSCG00000033741	NIP7	100	72.778	Sus_scrofa
ENSCING00000006610	-	100	70.000	ENSTGUG00000008073	NIP7	100	70.000	Taeniopygia_guttata
ENSCING00000006610	-	100	75.556	ENSTRUG00000020267	nip7	100	75.556	Takifugu_rubripes
ENSCING00000006610	-	100	76.111	ENSTNIG00000004660	nip7	100	76.111	Tetraodon_nigroviridis
ENSCING00000006610	-	100	72.778	ENSTTRG00000010012	NIP7	100	72.778	Tursiops_truncatus
ENSCING00000006610	-	100	73.333	ENSUAMG00000022688	NIP7	100	73.333	Ursus_americanus
ENSCING00000006610	-	100	73.333	ENSUMAG00000018771	NIP7	100	73.333	Ursus_maritimus
ENSCING00000006610	-	100	72.778	ENSVPAG00000003991	NIP7	100	72.778	Vicugna_pacos
ENSCING00000006610	-	100	72.222	ENSVVUG00000017160	-	100	72.222	Vulpes_vulpes
ENSCING00000006610	-	100	62.983	ENSVVUG00000008406	-	100	62.983	Vulpes_vulpes
ENSCING00000006610	-	100	78.889	ENSXETG00000017853	nip7	100	78.889	Xenopus_tropicalis
ENSCING00000006610	-	100	75.556	ENSXMAG00000025276	nip7	100	75.556	Xiphophorus_maculatus