EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006773 (Gene tree)
Gene ID: 100181001
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 7485 bases
Position: chr2:6971190-6978674
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013902	RRM_1	PF00076.22	7.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013902	-	3614	-	ENSCINP00000013902	452 (aa)	-	F6VEU2

Gene Model

Click here to download ENSCING00000006773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006773	-	71	71.077	ENSG00000131013	PPIL4	97	53.416	Homo_sapiens
ENSCING00000006773	-	80	64.738	ENSAPOG00000005904	ppil4	97	55.098	Acanthochromis_polyacanthus
ENSCING00000006773	-	72	69.909	ENSAMEG00000018278	PPIL4	97	52.675	Ailuropoda_melanoleuca
ENSCING00000006773	-	79	65.097	ENSACIG00000006837	ppil4	81	64.820	Amphilophus_citrinellus
ENSCING00000006773	-	80	64.738	ENSAOCG00000014541	ppil4	84	64.463	Amphiprion_ocellaris
ENSCING00000006773	-	80	64.738	ENSAPEG00000004245	ppil4	97	54.881	Amphiprion_percula
ENSCING00000006773	-	80	65.565	ENSATEG00000013141	ppil4	96	69.310	Anabas_testudineus
ENSCING00000006773	-	70	67.802	ENSAPLG00000008437	PPIL4	68	66.981	Anas_platyrhynchos
ENSCING00000006773	-	80	64.946	ENSACAG00000006936	PPIL4	94	55.120	Anolis_carolinensis
ENSCING00000006773	-	71	71.077	ENSANAG00000006499	PPIL4	97	53.416	Aotus_nancymaae
ENSCING00000006773	-	80	64.641	ENSACLG00000018467	ppil4	97	55.076	Astatotilapia_calliptera
ENSCING00000006773	-	79	66.389	ENSAMXG00000014167	ppil4	95	69.310	Astyanax_mexicanus
ENSCING00000006773	-	71	70.769	ENSBTAG00000016980	PPIL4	97	53.002	Bos_taurus
ENSCING00000006773	-	71	57.764	WBGene00000890	sig-7	99	49.654	Caenorhabditis_elegans
ENSCING00000006773	-	100	54.415	ENSCJAG00000019613	PPIL4	97	53.623	Callithrix_jacchus
ENSCING00000006773	-	80	64.674	ENSCAFG00000000379	PPIL4	91	53.209	Canis_familiaris
ENSCING00000006773	-	80	64.674	ENSCAFG00020013550	PPIL4	88	65.706	Canis_lupus_dingo
ENSCING00000006773	-	71	70.769	ENSCHIG00000010600	PPIL4	93	53.002	Capra_hircus
ENSCING00000006773	-	71	70.462	ENSTSYG00000009860	PPIL4	97	52.795	Carlito_syrichta
ENSCING00000006773	-	63	70.000	ENSCAPG00000004550	PPIL4	96	70.000	Cavia_aperea
ENSCING00000006773	-	80	64.946	ENSCPOG00000032871	PPIL4	97	53.830	Cavia_porcellus
ENSCING00000006773	-	71	71.077	ENSCCAG00000022598	PPIL4	97	53.209	Cebus_capucinus
ENSCING00000006773	-	71	71.077	ENSCATG00000039936	PPIL4	97	53.416	Cercocebus_atys
ENSCING00000006773	-	71	70.769	ENSCLAG00000003991	PPIL4	97	53.512	Chinchilla_lanigera
ENSCING00000006773	-	71	71.077	ENSCSAG00000017219	PPIL4	97	53.416	Chlorocebus_sabaeus
ENSCING00000006773	-	100	54.489	ENSCPBG00000016612	PPIL4	97	53.518	Chrysemys_picta_bellii
ENSCING00000006773	-	99	77.802	ENSCSAVG00000010619	-	99	67.735	Ciona_savignyi
ENSCING00000006773	-	80	64.674	ENSCGRG00001019623	Ppil4	96	53.766	Cricetulus_griseus_chok1gshd
ENSCING00000006773	-	80	64.674	ENSCGRG00000003980	Ppil4	96	53.766	Cricetulus_griseus_crigri
ENSCING00000006773	-	75	66.082	ENSCSEG00000015812	ppil4	74	65.789	Cynoglossus_semilaevis
ENSCING00000006773	-	80	64.187	ENSCVAG00000001078	ppil4	97	54.506	Cyprinodon_variegatus
ENSCING00000006773	-	96	55.604	ENSDARG00000043854	ppil4	100	56.264	Danio_rerio
ENSCING00000006773	-	80	64.946	ENSDNOG00000040219	PPIL4	97	53.209	Dasypus_novemcinctus
ENSCING00000006773	-	80	65.217	ENSDORG00000007186	Ppil4	97	53.416	Dipodomys_ordii
ENSCING00000006773	-	72	59.878	FBgn0027617	CG5808	74	47.475	Drosophila_melanogaster
ENSCING00000006773	-	71	70.462	ENSEASG00005008935	PPIL4	97	53.002	Equus_asinus_asinus
ENSCING00000006773	-	71	70.462	ENSECAG00000021819	PPIL4	97	53.002	Equus_caballus
ENSCING00000006773	-	80	61.413	ENSEEUG00000000959	PPIL4	97	51.346	Erinaceus_europaeus
ENSCING00000006773	-	71	66.769	ENSELUG00000018746	ppil4	100	51.050	Esox_lucius
ENSCING00000006773	-	71	70.462	ENSFCAG00000046720	PPIL4	97	52.795	Felis_catus
ENSCING00000006773	-	67	63.344	ENSFALG00000013130	PPIL4	72	62.215	Ficedula_albicollis
ENSCING00000006773	-	80	64.946	ENSFDAG00000008146	PPIL4	97	53.830	Fukomys_damarensis
ENSCING00000006773	-	71	68.847	ENSFHEG00000011503	ppil4	97	54.367	Fundulus_heteroclitus
ENSCING00000006773	-	71	67.593	ENSGMOG00000006191	ppil4	80	67.284	Gadus_morhua
ENSCING00000006773	-	80	65.217	ENSGALG00000012364	PPIL4	90	54.967	Gallus_gallus
ENSCING00000006773	-	71	70.093	ENSGAFG00000009521	ppil4	84	63.736	Gambusia_affinis
ENSCING00000006773	-	80	63.636	ENSGACG00000006639	ppil4	93	55.730	Gasterosteus_aculeatus
ENSCING00000006773	-	80	64.674	ENSGAGG00000005926	PPIL4	97	53.263	Gopherus_agassizii
ENSCING00000006773	-	71	71.077	ENSGGOG00000009686	PPIL4	97	53.416	Gorilla_gorilla
ENSCING00000006773	-	80	64.463	ENSHBUG00000021518	ppil4	99	54.176	Haplochromis_burtoni
ENSCING00000006773	-	80	65.217	ENSHGLG00000007609	PPIL4	97	54.037	Heterocephalus_glaber_female
ENSCING00000006773	-	80	65.217	ENSHGLG00100008308	PPIL4	97	54.037	Heterocephalus_glaber_male
ENSCING00000006773	-	90	60.870	ENSIPUG00000006626	PPIL4	99	56.871	Ictalurus_punctatus
ENSCING00000006773	-	71	70.769	ENSSTOG00000013980	PPIL4	74	63.736	Ictidomys_tridecemlineatus
ENSCING00000006773	-	71	70.769	ENSJJAG00000017619	Ppil4	97	53.512	Jaculus_jaculus
ENSCING00000006773	-	71	70.405	ENSKMAG00000014367	ppil4	98	54.762	Kryptolebias_marmoratus
ENSCING00000006773	-	80	63.260	ENSLBEG00000012172	ppil4	92	53.247	Labrus_bergylta
ENSCING00000006773	-	71	70.859	ENSLACG00000016551	PPIL4	91	56.278	Latimeria_chalumnae
ENSCING00000006773	-	71	68.847	ENSLOCG00000017002	ppil4	92	55.240	Lepisosteus_oculatus
ENSCING00000006773	-	80	58.108	ENSLAFG00000026804	PPIL4	97	48.347	Loxodonta_africana
ENSCING00000006773	-	71	71.077	ENSMFAG00000032721	PPIL4	97	53.416	Macaca_fascicularis
ENSCING00000006773	-	71	71.077	ENSMMUG00000023067	PPIL4	97	53.416	Macaca_mulatta
ENSCING00000006773	-	71	71.077	ENSMNEG00000042362	PPIL4	97	53.416	Macaca_nemestrina
ENSCING00000006773	-	71	71.077	ENSMLEG00000041942	PPIL4	97	53.416	Mandrillus_leucophaeus
ENSCING00000006773	-	100	54.762	ENSMAMG00000004525	ppil4	97	54.545	Mastacembelus_armatus
ENSCING00000006773	-	80	64.641	ENSMZEG00005015546	ppil4	97	55.076	Maylandia_zebra
ENSCING00000006773	-	75	64.928	ENSMGAG00000012596	PPIL4	73	63.930	Meleagris_gallopavo
ENSCING00000006773	-	80	64.674	ENSMAUG00000015059	Ppil4	96	53.556	Mesocricetus_auratus
ENSCING00000006773	-	71	60.923	ENSMICG00000006287	PPIL4	71	54.945	Microcebus_murinus
ENSCING00000006773	-	80	64.674	ENSMOCG00000012720	-	96	53.556	Microtus_ochrogaster
ENSCING00000006773	-	97	45.957	ENSMOCG00000000256	-	94	46.234	Microtus_ochrogaster
ENSCING00000006773	-	80	65.097	ENSMMOG00000014859	ppil4	98	55.629	Mola_mola
ENSCING00000006773	-	80	65.193	ENSMODG00000016825	PPIL4	96	55.391	Monodelphis_domestica
ENSCING00000006773	-	91	57.518	ENSMALG00000018887	ppil4	97	53.896	Monopterus_albus
ENSCING00000006773	-	71	70.769	MGP_CAROLIEiJ_G0015103	Ppil4	97	53.416	Mus_caroli
ENSCING00000006773	-	80	64.946	ENSMUSG00000015757	Ppil4	97	53.416	Mus_musculus
ENSCING00000006773	-	80	64.946	MGP_PahariEiJ_G0023722	Ppil4	97	53.830	Mus_pahari
ENSCING00000006773	-	80	64.946	MGP_SPRETEiJ_G0015910	Ppil4	97	53.416	Mus_spretus
ENSCING00000006773	-	71	70.462	ENSMPUG00000018073	PPIL4	97	53.002	Mustela_putorius_furo
ENSCING00000006773	-	72	70.213	ENSMLUG00000002766	PPIL4	66	69.231	Myotis_lucifugus
ENSCING00000006773	-	80	64.946	ENSNGAG00000008801	Ppil4	97	53.125	Nannospalax_galili
ENSCING00000006773	-	80	64.463	ENSNBRG00000010947	ppil4	97	55.076	Neolamprologus_brichardi
ENSCING00000006773	-	71	71.077	ENSNLEG00000015316	PPIL4	85	64.011	Nomascus_leucogenys
ENSCING00000006773	-	60	73.134	ENSOPRG00000005619	PPIL4	56	73.134	Ochotona_princeps
ENSCING00000006773	-	71	71.077	ENSODEG00000002499	PPIL4	97	53.830	Octodon_degus
ENSCING00000006773	-	80	64.917	ENSONIG00000011400	ppil4	99	57.311	Oreochromis_niloticus
ENSCING00000006773	-	79	62.022	ENSOANG00000001063	PPIL4	97	50.936	Ornithorhynchus_anatinus
ENSCING00000006773	-	71	70.769	ENSOCUG00000007696	PPIL4	97	53.209	Oryctolagus_cuniculus
ENSCING00000006773	-	71	71.028	ENSORLG00000015310	ppil4	99	54.955	Oryzias_latipes
ENSCING00000006773	-	71	71.028	ENSORLG00020008558	ppil4	92	70.000	Oryzias_latipes_hni
ENSCING00000006773	-	71	71.028	ENSORLG00015003655	ppil4	92	70.000	Oryzias_latipes_hsok
ENSCING00000006773	-	71	72.586	ENSOMEG00000011713	ppil4	96	71.724	Oryzias_melastigma
ENSCING00000006773	-	72	70.154	ENSOGAG00000014153	-	100	54.584	Otolemur_garnettii
ENSCING00000006773	-	80	55.435	ENSOGAG00000025753	-	76	54.945	Otolemur_garnettii
ENSCING00000006773	-	71	70.769	ENSOARG00000002675	PPIL4	97	53.002	Ovis_aries
ENSCING00000006773	-	71	71.077	ENSPPAG00000042154	PPIL4	97	53.416	Pan_paniscus
ENSCING00000006773	-	71	70.462	ENSPPRG00000004682	PPIL4	97	52.795	Panthera_pardus
ENSCING00000006773	-	68	70.607	ENSPTIG00000014238	PPIL4	56	65.569	Panthera_tigris_altaica
ENSCING00000006773	-	71	71.077	ENSPTRG00000018692	PPIL4	97	53.416	Pan_troglodytes
ENSCING00000006773	-	71	71.077	ENSPANG00000017996	PPIL4	97	53.416	Papio_anubis
ENSCING00000006773	-	99	55.814	ENSPKIG00000019748	ppil4	95	70.000	Paramormyrops_kingsleyae
ENSCING00000006773	-	51	68.376	ENSPSIG00000016651	PPIL4	59	65.939	Pelodiscus_sinensis
ENSCING00000006773	-	80	65.840	ENSPMGG00000002277	ppil4	99	57.919	Periophthalmus_magnuspinnatus
ENSCING00000006773	-	80	64.130	ENSPEMG00000010912	Ppil4	96	53.138	Peromyscus_maniculatus_bairdii
ENSCING00000006773	-	80	64.917	ENSPCIG00000025561	PPIL4	94	54.860	Phascolarctos_cinereus
ENSCING00000006773	-	71	70.405	ENSPFOG00000004145	ppil4	97	55.000	Poecilia_formosa
ENSCING00000006773	-	71	70.405	ENSPLAG00000001207	ppil4	97	55.338	Poecilia_latipinna
ENSCING00000006773	-	71	70.405	ENSPMEG00000009249	ppil4	97	68.966	Poecilia_mexicana
ENSCING00000006773	-	83	62.334	ENSPREG00000020355	ppil4	96	54.783	Poecilia_reticulata
ENSCING00000006773	-	72	55.723	ENSPPYG00000017785	-	99	46.413	Pongo_abelii
ENSCING00000006773	-	71	71.077	ENSPPYG00000029525	-	94	66.185	Pongo_abelii
ENSCING00000006773	-	58	78.313	ENSPCAG00000008203	PPIL4	81	78.313	Procavia_capensis
ENSCING00000006773	-	71	70.769	ENSPCOG00000016997	PPIL4	97	53.209	Propithecus_coquereli
ENSCING00000006773	-	80	64.674	ENSPVAG00000000746	PPIL4	97	53.209	Pteropus_vampyrus
ENSCING00000006773	-	80	64.641	ENSPNYG00000010608	ppil4	97	55.076	Pundamilia_nyererei
ENSCING00000006773	-	91	59.903	ENSPNAG00000002199	ppil4	99	55.230	Pygocentrus_nattereri
ENSCING00000006773	-	80	64.946	ENSRNOG00000015552	Ppil4	96	53.975	Rattus_norvegicus
ENSCING00000006773	-	72	70.517	ENSRBIG00000043467	PPIL4	97	54.797	Rhinopithecus_bieti
ENSCING00000006773	-	71	71.077	ENSRROG00000002923	PPIL4	97	53.416	Rhinopithecus_roxellana
ENSCING00000006773	-	71	71.077	ENSSBOG00000004498	PPIL4	97	53.416	Saimiri_boliviensis_boliviensis
ENSCING00000006773	-	80	64.641	ENSSHAG00000017140	PPIL4	97	54.507	Sarcophilus_harrisii
ENSCING00000006773	-	71	71.651	ENSSFOG00015020750	ppil4	97	56.858	Scleropages_formosus
ENSCING00000006773	-	100	55.000	ENSSMAG00000017653	ppil4	96	67.931	Scophthalmus_maximus
ENSCING00000006773	-	84	62.565	ENSSDUG00000010647	ppil4	99	57.494	Seriola_dumerili
ENSCING00000006773	-	84	62.042	ENSSLDG00000021975	ppil4	99	56.951	Seriola_lalandi_dorsalis
ENSCING00000006773	-	72	67.879	ENSSARG00000011244	PPIL4	66	66.871	Sorex_araneus
ENSCING00000006773	-	85	61.125	ENSSPUG00000005655	PPIL4	84	60.465	Sphenodon_punctatus
ENSCING00000006773	-	84	62.467	ENSSPAG00000017442	ppil4	99	57.562	Stegastes_partitus
ENSCING00000006773	-	71	70.462	ENSSSCG00000028867	PPIL4	97	52.588	Sus_scrofa
ENSCING00000006773	-	97	57.080	ENSTGUG00000010655	-	91	56.027	Taeniopygia_guttata
ENSCING00000006773	-	96	55.234	ENSTRUG00000006670	ppil4	90	67.241	Takifugu_rubripes
ENSCING00000006773	-	78	60.440	ENSTNIG00000002706	ppil4	91	60.278	Tetraodon_nigroviridis
ENSCING00000006773	-	71	57.846	ENSTTRG00000006014	PPIL4	97	44.513	Tursiops_truncatus
ENSCING00000006773	-	66	70.861	ENSUMAG00000002774	PPIL4	95	52.391	Ursus_maritimus
ENSCING00000006773	-	71	70.462	ENSVPAG00000005157	PPIL4	70	65.607	Vicugna_pacos
ENSCING00000006773	-	80	64.674	ENSVVUG00000005119	PPIL4	91	52.567	Vulpes_vulpes
ENSCING00000006773	-	99	54.762	ENSXETG00000021385	ppil4	96	54.148	Xenopus_tropicalis
ENSCING00000006773	-	80	64.365	ENSXCOG00000001316	ppil4	95	54.923	Xiphophorus_couchianus
ENSCING00000006773	-	71	69.782	ENSXMAG00000004998	ppil4	97	53.361	Xiphophorus_maculatus