EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006781 (Gene tree)
Gene ID: 100179970
Gene Symbol: -
Alias: -
Full Name: probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3422 bases
Position: chr8:1776758-1780179
Accession: 100179970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013921	eIF2A	PF08662.11	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013921	-	1523	XM_002121133	ENSCINP00000013921	337 (aa)	XP_002121169	F6VEB2

Gene Model

Click here to download ENSCING00000006781's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006781's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006781	-	99	82.143	ENSCSAVG00000003355	-	99	82.143	Ciona_savignyi
ENSCING00000006781	-	99	62.874	ENSCGRG00001016622	Ciao1	99	62.874	Cricetulus_griseus_chok1gshd
ENSCING00000006781	-	99	58.507	ENSMZEG00005010812	ciao1	100	58.507	Maylandia_zebra
ENSCING00000006781	-	99	62.874	ENSMAUG00000021994	Ciao1	94	62.874	Mesocricetus_auratus
ENSCING00000006781	-	99	62.874	ENSMOCG00000009518	Ciao1	99	62.874	Microtus_ochrogaster
ENSCING00000006781	-	99	56.380	ENSMALG00000002097	ciao1	99	56.380	Monopterus_albus
ENSCING00000006781	-	99	62.874	MGP_CAROLIEiJ_G0024251	Ciao1	96	62.874	Mus_caroli
ENSCING00000006781	-	99	62.874	ENSMUSG00000003662	Ciao1	96	62.874	Mus_musculus
ENSCING00000006781	-	99	64.072	MGP_PahariEiJ_G0025696	Ciao1	99	64.072	Mus_pahari
ENSCING00000006781	-	99	62.874	MGP_SPRETEiJ_G0025171	Ciao1	96	62.874	Mus_spretus
ENSCING00000006781	-	99	62.874	ENSPEMG00000015800	Ciao1	85	67.333	Peromyscus_maniculatus_bairdii