EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006813 (Gene tree)
Gene ID: 100178584
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX46
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 13721 bases
Position: chr2:6812770-6826490
Accession: 100178584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000013977	DEAD	PF00270.29	1.4e-50	1	1
ENSCINP00000013980	DEAD	PF00270.29	2.8e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000013977	-	3544	XM_002130955	ENSCINP00000013977	751 (aa)	XP_002130991	F6UMI6
ENSCINT00000013980	-	2973	-	ENSCINP00000013980	990 (aa)	-	F6TZX4

Gene Model

Click here to download ENSCING00000006813's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006813	-	100	73.307	ENSG00000145833	DDX46	99	75.000	Homo_sapiens
ENSCING00000006813	-	100	72.510	ENSAPOG00000000193	ddx46	91	67.034	Acanthochromis_polyacanthus
ENSCING00000006813	-	100	73.307	ENSAMEG00000017873	DDX46	86	67.370	Ailuropoda_melanoleuca
ENSCING00000006813	-	100	70.703	ENSACIG00000013235	ddx46	91	65.689	Amphilophus_citrinellus
ENSCING00000006813	-	100	71.224	ENSAOCG00000007758	ddx46	91	65.705	Amphiprion_ocellaris
ENSCING00000006813	-	100	71.354	ENSAPEG00000022648	ddx46	91	65.816	Amphiprion_percula
ENSCING00000006813	-	100	70.964	ENSATEG00000012998	ddx46	97	61.838	Anabas_testudineus
ENSCING00000006813	-	100	72.908	ENSAPLG00000013208	DDX46	85	67.148	Anas_platyrhynchos
ENSCING00000006813	-	100	72.332	ENSACAG00000001437	DDX46	100	67.224	Anolis_carolinensis
ENSCING00000006813	-	100	73.307	ENSANAG00000032116	DDX46	91	65.678	Aotus_nancymaae
ENSCING00000006813	-	100	72.318	ENSACLG00000014804	ddx46	93	67.110	Astatotilapia_calliptera
ENSCING00000006813	-	100	71.484	ENSAMXG00000008413	ddx46	89	64.301	Astyanax_mexicanus
ENSCING00000006813	-	100	73.307	ENSBTAG00000021520	DDX46	86	67.370	Bos_taurus
ENSCING00000006813	-	100	73.307	ENSCJAG00000005697	DDX46	86	67.370	Callithrix_jacchus
ENSCING00000006813	-	100	73.307	ENSCAFG00000001048	DDX46	86	67.370	Canis_familiaris
ENSCING00000006813	-	100	73.307	ENSCAFG00020006070	DDX46	95	66.329	Canis_lupus_dingo
ENSCING00000006813	-	100	73.307	ENSCHIG00000026009	DDX46	86	67.370	Capra_hircus
ENSCING00000006813	-	97	71.978	ENSTSYG00000003177	DDX46	85	66.900	Carlito_syrichta
ENSCING00000006813	-	100	73.307	ENSCPOG00000011362	DDX46	86	67.370	Cavia_porcellus
ENSCING00000006813	-	100	73.307	ENSCCAG00000026721	DDX46	90	65.678	Cebus_capucinus
ENSCING00000006813	-	100	73.174	ENSCATG00000040891	DDX46	74	73.046	Cercocebus_atys
ENSCING00000006813	-	100	73.307	ENSCLAG00000014581	DDX46	86	67.370	Chinchilla_lanigera
ENSCING00000006813	-	100	55.113	ENSCHOG00000005683	DDX46	79	53.301	Choloepus_hoffmanni
ENSCING00000006813	-	100	71.979	ENSCPBG00000008261	DDX46	95	67.042	Chrysemys_picta_bellii
ENSCING00000006813	-	99	87.179	ENSCSAVG00000002353	-	93	89.488	Ciona_savignyi
ENSCING00000006813	-	98	73.134	ENSCGRG00001024140	Ddx46	84	67.571	Cricetulus_griseus_chok1gshd
ENSCING00000006813	-	100	73.174	ENSCGRG00000005152	Ddx46	86	67.814	Cricetulus_griseus_crigri
ENSCING00000006813	-	100	71.001	ENSCSEG00000016886	ddx46	94	65.011	Cynoglossus_semilaevis
ENSCING00000006813	-	100	70.909	ENSCVAG00000022900	ddx46	94	66.630	Cyprinodon_variegatus
ENSCING00000006813	-	100	70.466	ENSDARG00000099458	ddx46	89	65.795	Danio_rerio
ENSCING00000006813	-	100	73.174	ENSDNOG00000011448	DDX46	86	67.259	Dasypus_novemcinctus
ENSCING00000006813	-	100	68.924	ENSDORG00000005447	Ddx46	86	64.009	Dipodomys_ordii
ENSCING00000006813	-	85	66.142	ENSETEG00000018455	DDX46	75	57.033	Echinops_telfairi
ENSCING00000006813	-	99	73.092	ENSEASG00005020329	DDX46	96	63.453	Equus_asinus_asinus
ENSCING00000006813	-	100	73.307	ENSECAG00000018217	DDX46	86	67.370	Equus_caballus
ENSCING00000006813	-	76	57.317	ENSEEUG00000003602	-	58	65.410	Erinaceus_europaeus
ENSCING00000006813	-	100	70.428	ENSELUG00000000817	ddx46	93	65.608	Esox_lucius
ENSCING00000006813	-	100	73.174	ENSFCAG00000026229	DDX46	86	67.259	Felis_catus
ENSCING00000006813	-	100	72.127	ENSFALG00000007947	DDX46	100	67.263	Ficedula_albicollis
ENSCING00000006813	-	100	73.307	ENSFDAG00000021262	DDX46	86	67.370	Fukomys_damarensis
ENSCING00000006813	-	100	70.833	ENSFHEG00000020055	ddx46	94	66.920	Fundulus_heteroclitus
ENSCING00000006813	-	100	71.713	ENSGMOG00000007990	ddx46	93	63.874	Gadus_morhua
ENSCING00000006813	-	100	72.655	ENSGALG00000006404	DDX46	86	66.703	Gallus_gallus
ENSCING00000006813	-	91	72.286	ENSGAFG00000007153	ddx46	92	62.690	Gambusia_affinis
ENSCING00000006813	-	100	72.510	ENSGACG00000000166	ddx46	94	62.733	Gasterosteus_aculeatus
ENSCING00000006813	-	100	71.598	ENSGAGG00000014910	DDX46	86	66.519	Gopherus_agassizii
ENSCING00000006813	-	100	73.307	ENSGGOG00000013843	DDX46	86	67.370	Gorilla_gorilla
ENSCING00000006813	-	100	72.318	ENSHBUG00000021074	ddx46	93	66.888	Haplochromis_burtoni
ENSCING00000006813	-	100	73.307	ENSHGLG00000010455	DDX46	90	67.370	Heterocephalus_glaber_female
ENSCING00000006813	-	100	73.307	ENSHGLG00100016515	DDX46	90	67.370	Heterocephalus_glaber_male
ENSCING00000006813	-	100	71.503	ENSIPUG00000002564	ddx46	92	63.525	Ictalurus_punctatus
ENSCING00000006813	-	56	72.422	ENSIPUG00000018977	-	92	72.422	Ictalurus_punctatus
ENSCING00000006813	-	81	72.488	ENSSTOG00000025564	DDX46	76	68.499	Ictidomys_tridecemlineatus
ENSCING00000006813	-	100	73.307	ENSJJAG00000013906	Ddx46	86	67.370	Jaculus_jaculus
ENSCING00000006813	-	100	70.833	ENSKMAG00000019510	ddx46	88	64.187	Kryptolebias_marmoratus
ENSCING00000006813	-	100	70.964	ENSLBEG00000027425	ddx46	94	63.913	Labrus_bergylta
ENSCING00000006813	-	100	72.112	ENSLACG00000007965	DDX46	71	72.507	Latimeria_chalumnae
ENSCING00000006813	-	100	70.817	ENSLOCG00000010169	ddx46	87	66.558	Lepisosteus_oculatus
ENSCING00000006813	-	100	72.944	ENSLAFG00000010465	DDX46	86	67.073	Loxodonta_africana
ENSCING00000006813	-	100	73.307	ENSMFAG00000044528	DDX46	86	67.370	Macaca_fascicularis
ENSCING00000006813	-	95	72.893	ENSMMUG00000012463	DDX46	82	66.744	Macaca_mulatta
ENSCING00000006813	-	100	73.307	ENSMNEG00000029903	DDX46	86	67.370	Macaca_nemestrina
ENSCING00000006813	-	100	73.307	ENSMLEG00000033516	DDX46	86	67.370	Mandrillus_leucophaeus
ENSCING00000006813	-	100	72.510	ENSMAMG00000021755	ddx46	87	67.261	Mastacembelus_armatus
ENSCING00000006813	-	100	72.318	ENSMZEG00005008989	ddx46	93	67.110	Maylandia_zebra
ENSCING00000006813	-	100	73.174	ENSMGAG00000008226	DDX46	86	67.110	Meleagris_gallopavo
ENSCING00000006813	-	100	73.307	ENSMAUG00000003267	Ddx46	86	67.370	Mesocricetus_auratus
ENSCING00000006813	-	100	73.307	ENSMICG00000028626	DDX46	87	65.862	Microcebus_murinus
ENSCING00000006813	-	99	73.103	ENSMOCG00000012141	Ddx46	76	73.046	Microtus_ochrogaster
ENSCING00000006813	-	100	72.908	ENSMMOG00000013470	ddx46	92	67.220	Mola_mola
ENSCING00000006813	-	100	73.041	ENSMODG00000014331	DDX46	86	67.925	Monodelphis_domestica
ENSCING00000006813	-	100	71.224	ENSMALG00000016796	ddx46	92	66.122	Monopterus_albus
ENSCING00000006813	-	100	73.174	MGP_CAROLIEiJ_G0018573	Ddx46	86	67.703	Mus_caroli
ENSCING00000006813	-	100	73.174	ENSMUSG00000021500	Ddx46	86	67.703	Mus_musculus
ENSCING00000006813	-	100	73.174	MGP_PahariEiJ_G0019638	Ddx46	86	67.703	Mus_pahari
ENSCING00000006813	-	100	73.174	MGP_SPRETEiJ_G0019453	Ddx46	86	67.703	Mus_spretus
ENSCING00000006813	-	100	73.307	ENSMPUG00000010045	DDX46	86	67.370	Mustela_putorius_furo
ENSCING00000006813	-	100	73.307	ENSMLUG00000012607	DDX46	85	67.370	Myotis_lucifugus
ENSCING00000006813	-	100	73.307	ENSNGAG00000020157	Ddx46	89	67.370	Nannospalax_galili
ENSCING00000006813	-	100	72.318	ENSNBRG00000008155	ddx46	93	66.556	Neolamprologus_brichardi
ENSCING00000006813	-	100	73.307	ENSNLEG00000008167	DDX46	90	65.678	Nomascus_leucogenys
ENSCING00000006813	-	64	74.803	ENSMEUG00000014890	-	59	67.699	Notamacropus_eugenii
ENSCING00000006813	-	100	72.244	ENSOPRG00000006646	DDX46	86	66.482	Ochotona_princeps
ENSCING00000006813	-	100	73.307	ENSODEG00000010023	DDX46	86	67.370	Octodon_degus
ENSCING00000006813	-	100	72.185	ENSONIG00000017282	ddx46	93	64.688	Oreochromis_niloticus
ENSCING00000006813	-	100	72.908	ENSOANG00000001842	DDX46	93	67.141	Ornithorhynchus_anatinus
ENSCING00000006813	-	100	73.174	ENSOCUG00000012206	DDX46	86	67.259	Oryctolagus_cuniculus
ENSCING00000006813	-	100	71.056	ENSORLG00000000903	ddx46	94	66.813	Oryzias_latipes
ENSCING00000006813	-	100	71.056	ENSORLG00020022093	ddx46	94	66.813	Oryzias_latipes_hni
ENSCING00000006813	-	100	71.056	ENSORLG00015007282	ddx46	94	66.813	Oryzias_latipes_hsok
ENSCING00000006813	-	100	70.725	ENSOMEG00000003338	ddx46	94	66.776	Oryzias_melastigma
ENSCING00000006813	-	100	72.739	ENSOGAG00000034921	-	86	67.000	Otolemur_garnettii
ENSCING00000006813	-	99	66.401	ENSOGAG00000011690	-	86	61.376	Otolemur_garnettii
ENSCING00000006813	-	100	73.307	ENSOARG00000014348	DDX46	85	67.370	Ovis_aries
ENSCING00000006813	-	100	73.307	ENSPPAG00000037804	DDX46	91	65.678	Pan_paniscus
ENSCING00000006813	-	100	73.174	ENSPPRG00000010743	DDX46	86	67.259	Panthera_pardus
ENSCING00000006813	-	100	73.041	ENSPTIG00000012382	DDX46	85	67.148	Panthera_tigris_altaica
ENSCING00000006813	-	100	73.307	ENSPTRG00000017248	DDX46	91	65.678	Pan_troglodytes
ENSCING00000006813	-	100	69.588	ENSPANG00000025084	DDX46	85	64.262	Papio_anubis
ENSCING00000006813	-	100	70.466	ENSPKIG00000010351	ddx46	90	66.046	Paramormyrops_kingsleyae
ENSCING00000006813	-	100	71.731	ENSPSIG00000004522	DDX46	86	67.293	Pelodiscus_sinensis
ENSCING00000006813	-	100	73.174	ENSPEMG00000013593	Ddx46	86	67.259	Peromyscus_maniculatus_bairdii
ENSCING00000006813	-	100	70.356	ENSPMAG00000007922	ddx46	71	70.321	Petromyzon_marinus
ENSCING00000006813	-	100	73.174	ENSPCIG00000009215	DDX46	100	68.126	Phascolarctos_cinereus
ENSCING00000006813	-	100	70.619	ENSPFOG00000004966	ddx46	70	71.731	Poecilia_formosa
ENSCING00000006813	-	100	70.619	ENSPLAG00000023562	ddx46	90	66.740	Poecilia_latipinna
ENSCING00000006813	-	100	71.005	ENSPMEG00000013401	ddx46	92	66.342	Poecilia_mexicana
ENSCING00000006813	-	100	70.490	ENSPREG00000005444	ddx46	87	64.581	Poecilia_reticulata
ENSCING00000006813	-	92	71.140	ENSPPYG00000015792	DDX46	69	71.140	Pongo_abelii
ENSCING00000006813	-	99	67.790	ENSPCAG00000012364	DDX46	71	67.790	Procavia_capensis
ENSCING00000006813	-	91	64.140	ENSPCOG00000018969	DDX46	84	62.500	Propithecus_coquereli
ENSCING00000006813	-	100	72.244	ENSPVAG00000015655	DDX46	86	66.482	Pteropus_vampyrus
ENSCING00000006813	-	99	71.867	ENSPNYG00000012327	ddx46	92	66.704	Pundamilia_nyererei
ENSCING00000006813	-	98	70.878	ENSPNAG00000010806	ddx46	87	65.670	Pygocentrus_nattereri
ENSCING00000006813	-	100	73.174	ENSRNOG00000021637	Ddx46	86	67.259	Rattus_norvegicus
ENSCING00000006813	-	89	73.167	ENSRBIG00000041150	DDX46	69	73.167	Rhinopithecus_bieti
ENSCING00000006813	-	100	73.307	ENSRROG00000029467	DDX46	86	67.370	Rhinopithecus_roxellana
ENSCING00000006813	-	97	46.051	ENSSBOG00000027666	DDX46	59	79.755	Saimiri_boliviensis_boliviensis
ENSCING00000006813	-	100	73.174	ENSSHAG00000014408	DDX46	76	68.036	Sarcophilus_harrisii
ENSCING00000006813	-	100	69.388	ENSSFOG00015020093	ddx46	93	65.081	Scleropages_formosus
ENSCING00000006813	-	100	71.244	ENSSMAG00000007229	ddx46	90	66.341	Scophthalmus_maximus
ENSCING00000006813	-	100	72.583	ENSSDUG00000020991	ddx46	93	66.996	Seriola_dumerili
ENSCING00000006813	-	100	72.679	ENSSLDG00000016854	ddx46	93	67.179	Seriola_lalandi_dorsalis
ENSCING00000006813	-	100	67.241	ENSSARG00000011073	DDX46	100	62.417	Sorex_araneus
ENSCING00000006813	-	99	72.886	ENSSPUG00000008985	DDX46	99	67.045	Sphenodon_punctatus
ENSCING00000006813	-	100	71.484	ENSSPAG00000017946	ddx46	90	66.849	Stegastes_partitus
ENSCING00000006813	-	100	73.307	ENSSSCG00000026644	DDX46	86	67.370	Sus_scrofa
ENSCING00000006813	-	100	72.450	ENSTGUG00000001260	-	86	66.777	Taeniopygia_guttata
ENSCING00000006813	-	100	71.131	ENSTRUG00000008878	ddx46	91	62.717	Takifugu_rubripes
ENSCING00000006813	-	100	72.487	ENSTNIG00000016100	ddx46	87	68.031	Tetraodon_nigroviridis
ENSCING00000006813	-	90	75.000	ENSTBEG00000002799	DDX46	78	75.000	Tupaia_belangeri
ENSCING00000006813	-	100	66.667	ENSTTRG00000016869	DDX46	86	61.820	Tursiops_truncatus
ENSCING00000006813	-	100	70.651	ENSUMAG00000017446	DDX46	85	65.150	Ursus_maritimus
ENSCING00000006813	-	100	69.854	ENSVPAG00000001591	DDX46	86	64.484	Vicugna_pacos
ENSCING00000006813	-	100	73.307	ENSVVUG00000017549	DDX46	90	67.370	Vulpes_vulpes
ENSCING00000006813	-	100	73.838	ENSXETG00000010405	ddx46	86	67.692	Xenopus_tropicalis
ENSCING00000006813	-	100	66.754	ENSXCOG00000004162	ddx46	91	65.160	Xiphophorus_couchianus
ENSCING00000006813	-	100	71.484	ENSXMAG00000008312	ddx46	96	66.811	Xiphophorus_maculatus