EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006838 (Gene tree)
Gene ID: 100185576
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2506 bases
Position: chr9:2941575-2944080
Accession: 100185576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014043	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014043	-	1238	-	ENSCINP00000014043	200 (aa)	XP_002131333	A0A1W2WHR9

Gene Model

Click here to download ENSCING00000006838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006838	-	99	75.377	ENSAPOG00000010760	rab18a	97	75.377	Acanthochromis_polyacanthus
ENSCING00000006838	-	99	65.829	ENSACIG00000009617	rab18a	97	65.829	Amphilophus_citrinellus
ENSCING00000006838	-	99	75.377	ENSAOCG00000016233	rab18a	97	75.377	Amphiprion_ocellaris
ENSCING00000006838	-	99	75.377	ENSAPEG00000005392	rab18a	97	75.377	Amphiprion_percula
ENSCING00000006838	-	99	75.879	ENSATEG00000021911	rab18a	97	75.879	Anabas_testudineus
ENSCING00000006838	-	99	78.000	ENSACAG00000005463	-	97	78.000	Anolis_carolinensis
ENSCING00000006838	-	99	74.372	ENSACLG00000011484	rab18a	97	74.372	Astatotilapia_calliptera
ENSCING00000006838	-	86	74.419	ENSCPBG00000027619	-	85	74.419	Chrysemys_picta_bellii
ENSCING00000006838	-	100	77.000	ENSCPBG00000015839	-	97	77.000	Chrysemys_picta_bellii
ENSCING00000006838	-	100	93.500	ENSCSAVG00000010348	-	100	93.500	Ciona_savignyi
ENSCING00000006838	-	99	74.874	ENSCSEG00000011816	rab18a	97	74.874	Cynoglossus_semilaevis
ENSCING00000006838	-	95	77.249	ENSCVAG00000015451	rab18a	97	75.377	Cyprinodon_variegatus
ENSCING00000006838	-	100	74.129	ENSDARG00000055291	rab18a	98	74.129	Danio_rerio
ENSCING00000006838	-	99	76.000	ENSELUG00000003805	rab18a	97	76.000	Esox_lucius
ENSCING00000006838	-	95	76.720	ENSFHEG00000019455	rab18a	97	74.874	Fundulus_heteroclitus
ENSCING00000006838	-	95	76.190	ENSGAFG00000002790	rab18a	97	74.372	Gambusia_affinis
ENSCING00000006838	-	100	76.500	ENSGAGG00000015642	-	97	76.500	Gopherus_agassizii
ENSCING00000006838	-	99	74.372	ENSHBUG00000001518	rab18a	97	74.372	Haplochromis_burtoni
ENSCING00000006838	-	99	74.372	ENSLBEG00000005861	rab18a	93	74.372	Labrus_bergylta
ENSCING00000006838	-	96	79.688	ENSLACG00000009310	rab18a	97	78.607	Latimeria_chalumnae
ENSCING00000006838	-	95	77.778	ENSLOCG00000007491	rab18a	97	76.000	Lepisosteus_oculatus
ENSCING00000006838	-	99	74.747	ENSMAMG00000014320	rab18a	97	74.747	Mastacembelus_armatus
ENSCING00000006838	-	99	74.242	ENSMZEG00005017235	rab18a	97	74.242	Maylandia_zebra
ENSCING00000006838	-	99	75.377	ENSMALG00000009813	rab18a	97	75.377	Monopterus_albus
ENSCING00000006838	-	99	74.372	ENSNBRG00000013507	rab18a	97	74.372	Neolamprologus_brichardi
ENSCING00000006838	-	90	77.222	ENSORLG00000004624	rab18a	97	72.864	Oryzias_latipes
ENSCING00000006838	-	90	77.778	ENSORLG00020008333	rab18a	97	73.367	Oryzias_latipes_hni
ENSCING00000006838	-	90	76.667	ENSORLG00015004739	rab18a	97	72.362	Oryzias_latipes_hsok
ENSCING00000006838	-	90	77.778	ENSOMEG00000020605	rab18a	97	73.367	Oryzias_melastigma
ENSCING00000006838	-	99	76.000	ENSPKIG00000009825	rab18a	97	76.000	Paramormyrops_kingsleyae
ENSCING00000006838	-	95	77.778	ENSPMGG00000020409	-	97	76.382	Periophthalmus_magnuspinnatus
ENSCING00000006838	-	90	79.444	ENSPFOG00000007571	rab18a	97	74.874	Poecilia_formosa
ENSCING00000006838	-	90	79.444	ENSPLAG00000010104	rab18a	97	74.874	Poecilia_latipinna
ENSCING00000006838	-	90	79.444	ENSPMEG00000013085	rab18a	97	74.874	Poecilia_mexicana
ENSCING00000006838	-	90	79.444	ENSPREG00000005923	rab18a	80	74.874	Poecilia_reticulata
ENSCING00000006838	-	99	74.372	ENSPNYG00000007064	rab18a	97	74.372	Pundamilia_nyererei
ENSCING00000006838	-	100	75.248	ENSPNAG00000011548	rab18a	100	75.248	Pygocentrus_nattereri
ENSCING00000006838	-	95	78.836	ENSSFOG00015017444	rab18a	81	77.500	Scleropages_formosus
ENSCING00000006838	-	95	76.190	ENSSMAG00000002969	rab18a	97	74.372	Scophthalmus_maximus
ENSCING00000006838	-	95	76.720	ENSSDUG00000003823	rab18a	97	74.874	Seriola_dumerili
ENSCING00000006838	-	95	76.720	ENSSLDG00000006977	rab18a	97	74.874	Seriola_lalandi_dorsalis
ENSCING00000006838	-	95	78.836	ENSSPUG00000017677	-	97	76.000	Sphenodon_punctatus
ENSCING00000006838	-	99	76.382	ENSTRUG00000004984	rab18a	97	76.382	Takifugu_rubripes
ENSCING00000006838	-	95	77.249	ENSUMAG00000015574	-	97	74.500	Ursus_maritimus
ENSCING00000006838	-	95	80.952	ENSXETG00000004556	rab18	97	78.000	Xenopus_tropicalis
ENSCING00000006838	-	95	76.190	ENSXMAG00000024122	rab18a	97	74.372	Xiphophorus_maculatus