EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006878 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2551 bases
Position: chr8:5592858-5595408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014140	DEAD	PF00270.29	4.1e-08	1	1
ENSCINP00000014140	HA2	PF04408.23	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014140	-	1983	-	ENSCINP00000014140	661 (aa)	-	F6YUE7

Gene Model

Click here to download ENSCING00000006878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006878	-	100	58.824	ENSG00000101452	DHX35	94	58.824	Homo_sapiens
ENSCING00000006878	-	99	60.817	ENSAPOG00000016979	zgc:158828	92	60.817	Acanthochromis_polyacanthus
ENSCING00000006878	-	100	59.427	ENSAMEG00000011925	DHX35	94	59.427	Ailuropoda_melanoleuca
ENSCING00000006878	-	99	58.699	ENSACIG00000009707	zgc:158828	94	58.699	Amphilophus_citrinellus
ENSCING00000006878	-	99	60.666	ENSAOCG00000020254	zgc:158828	94	60.666	Amphiprion_ocellaris
ENSCING00000006878	-	99	60.666	ENSAPEG00000008001	zgc:158828	92	60.666	Amphiprion_percula
ENSCING00000006878	-	99	60.514	ENSATEG00000005292	zgc:158828	96	61.321	Anabas_testudineus
ENSCING00000006878	-	100	59.398	ENSAPLG00000008832	DHX35	95	59.398	Anas_platyrhynchos
ENSCING00000006878	-	100	59.427	ENSACAG00000014298	DHX35	82	59.427	Anolis_carolinensis
ENSCING00000006878	-	100	55.807	ENSANAG00000037687	DHX35	94	55.807	Aotus_nancymaae
ENSCING00000006878	-	99	60.968	ENSACLG00000026087	zgc:158828	94	60.968	Astatotilapia_calliptera
ENSCING00000006878	-	96	57.944	ENSAMXG00000020520	zgc:158828	94	57.944	Astyanax_mexicanus
ENSCING00000006878	-	100	58.824	ENSBTAG00000004039	DHX35	94	58.824	Bos_taurus
ENSCING00000006878	-	100	50.449	WBGene00022056	ddx-35	90	50.449	Caenorhabditis_elegans
ENSCING00000006878	-	100	58.673	ENSCJAG00000011495	DHX35	94	58.673	Callithrix_jacchus
ENSCING00000006878	-	100	57.466	ENSCAFG00000009044	DHX35	95	57.421	Canis_familiaris
ENSCING00000006878	-	82	57.875	ENSCAFG00020012796	-	99	57.875	Canis_lupus_dingo
ENSCING00000006878	-	100	58.974	ENSCHIG00000023863	DHX35	94	58.974	Capra_hircus
ENSCING00000006878	-	98	59.112	ENSTSYG00000007049	DHX35	94	59.112	Carlito_syrichta
ENSCING00000006878	-	100	58.673	ENSCPOG00000012411	DHX35	94	58.673	Cavia_porcellus
ENSCING00000006878	-	100	56.712	ENSCCAG00000030551	DHX35	99	57.692	Cebus_capucinus
ENSCING00000006878	-	100	58.824	ENSCATG00000032920	DHX35	94	58.824	Cercocebus_atys
ENSCING00000006878	-	100	58.824	ENSCLAG00000006320	DHX35	94	58.824	Chinchilla_lanigera
ENSCING00000006878	-	100	58.673	ENSCSAG00000013928	DHX35	94	58.673	Chlorocebus_sabaeus
ENSCING00000006878	-	89	52.174	ENSCHOG00000006813	DHX35	83	52.174	Choloepus_hoffmanni
ENSCING00000006878	-	82	57.326	ENSCPBG00000018175	-	99	57.326	Chrysemys_picta_bellii
ENSCING00000006878	-	100	58.673	ENSCANG00000042479	DHX35	94	58.673	Colobus_angolensis_palliatus
ENSCING00000006878	-	100	58.824	ENSCGRG00001006986	Dhx35	94	58.824	Cricetulus_griseus_chok1gshd
ENSCING00000006878	-	100	58.824	ENSCGRG00000014712	Dhx35	94	58.824	Cricetulus_griseus_crigri
ENSCING00000006878	-	98	58.308	ENSCSEG00000021003	zgc:158828	87	58.308	Cynoglossus_semilaevis
ENSCING00000006878	-	99	59.758	ENSCVAG00000010301	zgc:158828	94	59.758	Cyprinodon_variegatus
ENSCING00000006878	-	73	59.671	ENSDARG00000063419	DHX35	99	59.671	Danio_rerio
ENSCING00000006878	-	100	58.220	ENSDNOG00000017447	DHX35	94	58.220	Dasypus_novemcinctus
ENSCING00000006878	-	100	58.673	ENSDORG00000005573	Dhx35	94	58.673	Dipodomys_ordii
ENSCING00000006878	-	98	50.923	FBgn0031631	CG3225	94	50.923	Drosophila_melanogaster
ENSCING00000006878	-	93	53.008	ENSETEG00000010293	DHX35	87	53.008	Echinops_telfairi
ENSCING00000006878	-	100	55.322	ENSEBUG00000000373	zgc:158828	94	55.322	Eptatretus_burgeri
ENSCING00000006878	-	99	59.174	ENSEASG00005023467	DHX35	91	59.174	Equus_asinus_asinus
ENSCING00000006878	-	100	58.824	ENSECAG00000013881	DHX35	94	58.824	Equus_caballus
ENSCING00000006878	-	88	54.576	ENSEEUG00000006399	DHX35	83	54.576	Erinaceus_europaeus
ENSCING00000006878	-	99	60.212	ENSELUG00000001988	zgc:158828	94	60.212	Esox_lucius
ENSCING00000006878	-	100	58.974	ENSFCAG00000025103	DHX35	94	58.974	Felis_catus
ENSCING00000006878	-	89	57.022	ENSFALG00000005627	-	86	57.022	Ficedula_albicollis
ENSCING00000006878	-	100	58.824	ENSFDAG00000016726	DHX35	94	58.824	Fukomys_damarensis
ENSCING00000006878	-	99	59.607	ENSFHEG00000022602	zgc:158828	95	60.093	Fundulus_heteroclitus
ENSCING00000006878	-	98	60.000	ENSGMOG00000003036	zgc:158828	94	60.000	Gadus_morhua
ENSCING00000006878	-	98	58.806	ENSGALG00000003658	DHX35	91	58.806	Gallus_gallus
ENSCING00000006878	-	99	59.455	ENSGAFG00000021118	zgc:158828	94	59.455	Gambusia_affinis
ENSCING00000006878	-	99	59.909	ENSGACG00000001290	zgc:158828	99	59.191	Gasterosteus_aculeatus
ENSCING00000006878	-	100	58.522	ENSGAGG00000015721	DHX35	94	58.522	Gopherus_agassizii
ENSCING00000006878	-	100	58.824	ENSGGOG00000013960	DHX35	94	58.824	Gorilla_gorilla
ENSCING00000006878	-	99	60.817	ENSHBUG00000005482	zgc:158828	94	60.817	Haplochromis_burtoni
ENSCING00000006878	-	97	59.565	ENSHGLG00000010264	DHX35	97	59.565	Heterocephalus_glaber_female
ENSCING00000006878	-	100	58.974	ENSHGLG00100019231	DHX35	94	58.974	Heterocephalus_glaber_male
ENSCING00000006878	-	99	59.607	ENSHCOG00000011691	zgc:158828	94	59.607	Hippocampus_comes
ENSCING00000006878	-	100	61.388	ENSIPUG00000016363	dhx35	94	61.388	Ictalurus_punctatus
ENSCING00000006878	-	100	59.427	ENSSTOG00000002005	DHX35	94	59.427	Ictidomys_tridecemlineatus
ENSCING00000006878	-	100	56.561	ENSJJAG00000000208	Dhx35	94	56.561	Jaculus_jaculus
ENSCING00000006878	-	99	59.758	ENSKMAG00000018089	zgc:158828	94	59.758	Kryptolebias_marmoratus
ENSCING00000006878	-	99	54.386	ENSLBEG00000006365	zgc:158828	94	54.386	Labrus_bergylta
ENSCING00000006878	-	100	57.721	ENSLACG00000015340	DHX35	94	57.721	Latimeria_chalumnae
ENSCING00000006878	-	100	60.633	ENSLOCG00000004639	zgc:158828	94	60.633	Lepisosteus_oculatus
ENSCING00000006878	-	100	59.125	ENSLAFG00000004103	DHX35	94	59.125	Loxodonta_africana
ENSCING00000006878	-	100	58.673	ENSMFAG00000031593	DHX35	94	58.673	Macaca_fascicularis
ENSCING00000006878	-	100	58.673	ENSMMUG00000003385	DHX35	94	58.673	Macaca_mulatta
ENSCING00000006878	-	100	58.673	ENSMNEG00000024351	DHX35	94	58.673	Macaca_nemestrina
ENSCING00000006878	-	100	58.824	ENSMLEG00000037761	DHX35	94	58.824	Mandrillus_leucophaeus
ENSCING00000006878	-	99	60.363	ENSMAMG00000010572	zgc:158828	94	60.363	Mastacembelus_armatus
ENSCING00000006878	-	99	60.968	ENSMZEG00005026563	zgc:158828	94	60.968	Maylandia_zebra
ENSCING00000006878	-	100	58.947	ENSMGAG00000003174	DHX35	94	58.947	Meleagris_gallopavo
ENSCING00000006878	-	100	55.204	ENSMAUG00000004742	Dhx35	94	55.204	Mesocricetus_auratus
ENSCING00000006878	-	100	58.824	ENSMICG00000013282	DHX35	94	58.824	Microcebus_murinus
ENSCING00000006878	-	100	58.673	ENSMOCG00000007520	Dhx35	94	58.673	Microtus_ochrogaster
ENSCING00000006878	-	99	54.655	ENSMMOG00000020376	zgc:158828	94	54.655	Mola_mola
ENSCING00000006878	-	100	58.371	ENSMODG00000000495	DHX35	94	58.371	Monodelphis_domestica
ENSCING00000006878	-	99	56.732	ENSMALG00000000446	zgc:158828	94	56.732	Monopterus_albus
ENSCING00000006878	-	100	58.522	MGP_CAROLIEiJ_G0024595	Dhx35	94	58.522	Mus_caroli
ENSCING00000006878	-	100	58.673	ENSMUSG00000027655	Dhx35	94	58.673	Mus_musculus
ENSCING00000006878	-	100	58.673	MGP_PahariEiJ_G0026039	Dhx35	94	58.673	Mus_pahari
ENSCING00000006878	-	100	58.673	MGP_SPRETEiJ_G0025517	Dhx35	94	58.673	Mus_spretus
ENSCING00000006878	-	100	56.842	ENSMPUG00000017704	DHX35	98	59.121	Mustela_putorius_furo
ENSCING00000006878	-	100	58.974	ENSMLUG00000009227	DHX35	94	58.974	Myotis_lucifugus
ENSCING00000006878	-	100	59.125	ENSNGAG00000018900	Dhx35	94	59.125	Nannospalax_galili
ENSCING00000006878	-	99	58.548	ENSNBRG00000014723	zgc:158828	94	58.548	Neolamprologus_brichardi
ENSCING00000006878	-	99	59.480	ENSNLEG00000006429	DHX35	94	59.480	Nomascus_leucogenys
ENSCING00000006878	-	66	67.089	ENSMEUG00000004250	-	62	67.089	Notamacropus_eugenii
ENSCING00000006878	-	97	55.521	ENSOPRG00000013605	DHX35	91	55.521	Ochotona_princeps
ENSCING00000006878	-	100	58.974	ENSODEG00000015255	DHX35	94	58.974	Octodon_degus
ENSCING00000006878	-	99	60.451	ENSONIG00000017426	zgc:158828	94	60.451	Oreochromis_niloticus
ENSCING00000006878	-	100	58.673	ENSOANG00000015094	DHX35	95	58.673	Ornithorhynchus_anatinus
ENSCING00000006878	-	100	58.371	ENSOCUG00000009416	DHX35	81	58.371	Oryctolagus_cuniculus
ENSCING00000006878	-	98	60.308	ENSORLG00000009467	zgc:158828	93	60.308	Oryzias_latipes
ENSCING00000006878	-	99	59.758	ENSORLG00020001572	zgc:158828	94	59.758	Oryzias_latipes_hni
ENSCING00000006878	-	99	59.758	ENSORLG00015018995	zgc:158828	94	59.758	Oryzias_latipes_hsok
ENSCING00000006878	-	99	59.909	ENSOMEG00000012536	zgc:158828	94	59.909	Oryzias_melastigma
ENSCING00000006878	-	100	56.712	ENSOGAG00000000954	DHX35	94	56.712	Otolemur_garnettii
ENSCING00000006878	-	100	58.824	ENSOARG00000000998	DHX35	94	58.824	Ovis_aries
ENSCING00000006878	-	100	58.824	ENSPPAG00000038372	DHX35	94	58.824	Pan_paniscus
ENSCING00000006878	-	100	59.125	ENSPPRG00000007005	DHX35	94	59.125	Panthera_pardus
ENSCING00000006878	-	100	59.125	ENSPTIG00000009935	DHX35	94	59.125	Panthera_tigris_altaica
ENSCING00000006878	-	100	58.673	ENSPTRG00000013497	DHX35	94	58.673	Pan_troglodytes
ENSCING00000006878	-	100	58.824	ENSPANG00000016616	DHX35	95	57.315	Papio_anubis
ENSCING00000006878	-	100	60.935	ENSPKIG00000005719	zgc:158828	94	60.935	Paramormyrops_kingsleyae
ENSCING00000006878	-	98	58.040	ENSPSIG00000005552	DHX35	90	58.040	Pelodiscus_sinensis
ENSCING00000006878	-	99	57.186	ENSPMGG00000006967	zgc:158828	94	57.186	Periophthalmus_magnuspinnatus
ENSCING00000006878	-	100	58.824	ENSPEMG00000021828	Dhx35	94	58.824	Peromyscus_maniculatus_bairdii
ENSCING00000006878	-	99	46.460	ENSPMAG00000004127	zgc:158828	93	46.460	Petromyzon_marinus
ENSCING00000006878	-	100	58.824	ENSPCIG00000010725	DHX35	94	58.824	Phascolarctos_cinereus
ENSCING00000006878	-	99	59.607	ENSPFOG00000007451	zgc:158828	95	59.607	Poecilia_formosa
ENSCING00000006878	-	99	59.758	ENSPLAG00000023800	zgc:158828	94	59.758	Poecilia_latipinna
ENSCING00000006878	-	99	59.455	ENSPMEG00000003831	zgc:158828	94	59.455	Poecilia_mexicana
ENSCING00000006878	-	99	59.455	ENSPREG00000018197	zgc:158828	99	59.938	Poecilia_reticulata
ENSCING00000006878	-	100	58.522	ENSPPYG00000011007	DHX35	94	58.522	Pongo_abelii
ENSCING00000006878	-	85	48.780	ENSPCAG00000002107	DHX35	79	48.780	Procavia_capensis
ENSCING00000006878	-	93	53.160	ENSPCOG00000022032	DHX35	92	53.160	Propithecus_coquereli
ENSCING00000006878	-	100	53.846	ENSPVAG00000012078	DHX35	94	53.846	Pteropus_vampyrus
ENSCING00000006878	-	99	60.968	ENSPNYG00000001597	zgc:158828	94	60.968	Pundamilia_nyererei
ENSCING00000006878	-	100	60.784	ENSPNAG00000023549	zgc:158828	94	60.784	Pygocentrus_nattereri
ENSCING00000006878	-	100	58.824	ENSRNOG00000015928	Dhx35	94	58.824	Rattus_norvegicus
ENSCING00000006878	-	100	58.673	ENSRBIG00000036635	DHX35	94	57.580	Rhinopithecus_bieti
ENSCING00000006878	-	100	58.522	ENSRROG00000031055	DHX35	94	58.522	Rhinopithecus_roxellana
ENSCING00000006878	-	100	58.824	ENSSBOG00000029157	DHX35	94	59.265	Saimiri_boliviensis_boliviensis
ENSCING00000006878	-	100	60.332	ENSSFOG00015021820	dhx35	94	60.332	Scleropages_formosus
ENSCING00000006878	-	99	60.514	ENSSMAG00000008419	zgc:158828	94	60.514	Scophthalmus_maximus
ENSCING00000006878	-	99	60.514	ENSSDUG00000016954	zgc:158828	94	60.514	Seriola_dumerili
ENSCING00000006878	-	99	60.514	ENSSLDG00000025317	zgc:158828	94	60.514	Seriola_lalandi_dorsalis
ENSCING00000006878	-	99	55.690	ENSSPUG00000008996	DHX35	92	55.690	Sphenodon_punctatus
ENSCING00000006878	-	96	61.478	ENSSPAG00000000687	zgc:158828	97	61.478	Stegastes_partitus
ENSCING00000006878	-	100	59.125	ENSSSCG00000007352	DHX35	94	59.125	Sus_scrofa
ENSCING00000006878	-	100	58.522	ENSTGUG00000004620	-	94	58.522	Taeniopygia_guttata
ENSCING00000006878	-	99	60.817	ENSTRUG00000001011	zgc:158828	94	60.877	Takifugu_rubripes
ENSCING00000006878	-	78	61.583	ENSTNIG00000017863	zgc:158828	93	61.583	Tetraodon_nigroviridis
ENSCING00000006878	-	88	56.336	ENSTBEG00000001832	DHX35	83	56.336	Tupaia_belangeri
ENSCING00000006878	-	100	56.410	ENSTTRG00000007694	DHX35	94	56.410	Tursiops_truncatus
ENSCING00000006878	-	100	59.125	ENSUAMG00000009681	DHX35	94	59.125	Ursus_americanus
ENSCING00000006878	-	100	58.371	ENSUMAG00000003211	DHX35	94	58.371	Ursus_maritimus
ENSCING00000006878	-	100	59.125	ENSVVUG00000029235	DHX35	86	59.125	Vulpes_vulpes
ENSCING00000006878	-	93	57.810	ENSXETG00000012145	dhx35	89	57.810	Xenopus_tropicalis
ENSCING00000006878	-	99	56.884	ENSXCOG00000008020	zgc:158828	94	56.884	Xiphophorus_couchianus
ENSCING00000006878	-	99	59.455	ENSXMAG00000015468	zgc:158828	94	59.455	Xiphophorus_maculatus