EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006888 (Gene tree)
Gene ID: 100170068
Gene Symbol: -
Alias: -
Full Name: zinc finger (C-x8-C-x5-C-x3-H)-2
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4601 bases
Position: chr9:286267-290867
Accession: 100170068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014158	zf-CCCH	PF00642.24	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014158	-	1637	-	ENSCINP00000014158	407 (aa)	XP_002120777	F6YTX7

Gene Model

Click here to download ENSCING00000006888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006888	-	96	55.961	ENSG00000065548	ZC3H15	99	56.206	Homo_sapiens
ENSCING00000006888	-	96	53.186	ENSAPOG00000009186	zc3h15	99	54.481	Acanthochromis_polyacanthus
ENSCING00000006888	-	96	56.448	ENSAMEG00000008314	ZC3H15	99	56.909	Ailuropoda_melanoleuca
ENSCING00000006888	-	96	54.146	ENSACIG00000009204	zc3h15	99	56.368	Amphilophus_citrinellus
ENSCING00000006888	-	96	54.722	ENSAOCG00000007675	zc3h15	99	55.245	Amphiprion_ocellaris
ENSCING00000006888	-	96	53.828	ENSAPEG00000014281	zc3h15	99	54.608	Amphiprion_percula
ENSCING00000006888	-	96	54.157	ENSATEG00000016978	zc3h15	99	54.483	Anabas_testudineus
ENSCING00000006888	-	90	56.736	ENSAPLG00000005971	ZC3H15	97	57.857	Anas_platyrhynchos
ENSCING00000006888	-	91	55.297	ENSACAG00000001916	ZC3H15	99	54.863	Anolis_carolinensis
ENSCING00000006888	-	96	56.691	ENSANAG00000026203	ZC3H15	99	56.909	Aotus_nancymaae
ENSCING00000006888	-	96	53.972	ENSACLG00000027219	zc3h15	99	54.751	Astatotilapia_calliptera
ENSCING00000006888	-	96	55.476	ENSAMXG00000032853	zc3h15	99	55.963	Astyanax_mexicanus
ENSCING00000006888	-	96	56.448	ENSBTAG00000021762	ZC3H15	99	56.909	Bos_taurus
ENSCING00000006888	-	96	56.448	ENSCJAG00000005931	ZC3H15	99	56.674	Callithrix_jacchus
ENSCING00000006888	-	91	55.959	ENSCAFG00000014494	ZC3H15	95	56.000	Canis_familiaris
ENSCING00000006888	-	96	56.448	ENSCAFG00020008457	ZC3H15	99	56.909	Canis_lupus_dingo
ENSCING00000006888	-	93	55.330	ENSCHIG00000026136	-	95	56.000	Capra_hircus
ENSCING00000006888	-	96	56.341	ENSTSYG00000011019	ZC3H15	99	56.573	Carlito_syrichta
ENSCING00000006888	-	91	53.608	ENSCAPG00000009954	ZC3H15	98	53.634	Cavia_aperea
ENSCING00000006888	-	96	55.854	ENSCPOG00000012965	ZC3H15	99	56.440	Cavia_porcellus
ENSCING00000006888	-	96	56.691	ENSCCAG00000035677	-	99	56.909	Cebus_capucinus
ENSCING00000006888	-	96	56.448	ENSCATG00000030359	ZC3H15	99	56.674	Cercocebus_atys
ENSCING00000006888	-	96	55.961	ENSCLAG00000016439	ZC3H15	99	56.206	Chinchilla_lanigera
ENSCING00000006888	-	96	56.448	ENSCSAG00000012554	ZC3H15	99	56.674	Chlorocebus_sabaeus
ENSCING00000006888	-	91	55.556	ENSCHOG00000011958	ZC3H15	99	55.500	Choloepus_hoffmanni
ENSCING00000006888	-	90	56.364	ENSCPBG00000001108	ZC3H15	99	58.856	Chrysemys_picta_bellii
ENSCING00000006888	-	96	56.448	ENSCANG00000031974	ZC3H15	99	56.674	Colobus_angolensis_palliatus
ENSCING00000006888	-	96	55.610	ENSCGRG00001019781	Zc3h15	99	55.869	Cricetulus_griseus_chok1gshd
ENSCING00000006888	-	91	54.805	ENSCGRG00000000943	Zc3h15	99	54.887	Cricetulus_griseus_crigri
ENSCING00000006888	-	92	57.841	ENSCSEG00000017422	zc3h15	99	56.845	Cynoglossus_semilaevis
ENSCING00000006888	-	96	56.265	ENSCVAG00000016138	zc3h15	99	56.872	Cyprinodon_variegatus
ENSCING00000006888	-	90	54.756	ENSDARG00000015889	zc3h15	99	55.556	Danio_rerio
ENSCING00000006888	-	93	45.960	ENSDNOG00000035570	-	94	45.960	Dasypus_novemcinctus
ENSCING00000006888	-	96	55.854	ENSDNOG00000046919	-	99	56.338	Dasypus_novemcinctus
ENSCING00000006888	-	96	56.691	ENSDORG00000011664	-	99	56.909	Dipodomys_ordii
ENSCING00000006888	-	96	50.735	ENSDORG00000029591	-	99	51.887	Dipodomys_ordii
ENSCING00000006888	-	86	56.267	FBgn0033317	CG8635	99	50.831	Drosophila_melanogaster
ENSCING00000006888	-	96	56.553	ENSEASG00005022074	ZC3H15	99	56.776	Equus_asinus_asinus
ENSCING00000006888	-	96	56.553	ENSECAG00000017149	ZC3H15	99	56.776	Equus_caballus
ENSCING00000006888	-	96	54.300	ENSELUG00000000912	-	99	54.060	Esox_lucius
ENSCING00000006888	-	96	54.869	ENSELUG00000013629	zc3h15	99	54.691	Esox_lucius
ENSCING00000006888	-	96	56.311	ENSFCAG00000008213	ZC3H15	99	56.542	Felis_catus
ENSCING00000006888	-	96	56.763	ENSFALG00000004566	ZC3H15	99	57.209	Ficedula_albicollis
ENSCING00000006888	-	96	56.204	ENSFDAG00000020578	ZC3H15	99	56.440	Fukomys_damarensis
ENSCING00000006888	-	96	55.012	ENSFHEG00000012799	zc3h15	87	56.265	Fundulus_heteroclitus
ENSCING00000006888	-	90	55.181	ENSGMOG00000002398	zc3h15	99	54.042	Gadus_morhua
ENSCING00000006888	-	96	57.143	ENSGALG00000041857	ZC3H15	99	57.110	Gallus_gallus
ENSCING00000006888	-	92	56.186	ENSGAFG00000003724	zc3h15	99	55.684	Gambusia_affinis
ENSCING00000006888	-	90	56.806	ENSGACG00000011648	zc3h15	99	57.210	Gasterosteus_aculeatus
ENSCING00000006888	-	90	56.364	ENSGAGG00000023689	ZC3H15	99	56.776	Gopherus_agassizii
ENSCING00000006888	-	96	56.204	ENSGGOG00000000073	ZC3H15	99	56.440	Gorilla_gorilla
ENSCING00000006888	-	96	55.696	ENSHBUG00000001003	zc3h15	99	56.724	Haplochromis_burtoni
ENSCING00000006888	-	96	56.311	ENSHGLG00000019121	-	99	56.542	Heterocephalus_glaber_female
ENSCING00000006888	-	96	51.079	ENSHGLG00100000040	-	99	50.346	Heterocephalus_glaber_male
ENSCING00000006888	-	96	47.689	ENSHGLG00100011099	-	99	48.244	Heterocephalus_glaber_male
ENSCING00000006888	-	96	52.927	ENSHGLG00100000509	-	99	53.286	Heterocephalus_glaber_male
ENSCING00000006888	-	96	52.804	ENSIPUG00000002902	zc3h15	88	53.378	Ictalurus_punctatus
ENSCING00000006888	-	96	56.829	ENSSTOG00000006873	ZC3H15	99	57.042	Ictidomys_tridecemlineatus
ENSCING00000006888	-	96	56.585	ENSJJAG00000021088	-	99	57.042	Jaculus_jaculus
ENSCING00000006888	-	96	55.037	ENSKMAG00000007580	zc3h15	99	56.295	Kryptolebias_marmoratus
ENSCING00000006888	-	92	54.987	ENSLBEG00000002637	zc3h15	95	53.202	Labrus_bergylta
ENSCING00000006888	-	96	59.314	ENSLACG00000002935	ZC3H15	99	59.529	Latimeria_chalumnae
ENSCING00000006888	-	96	57.039	ENSLAFG00000001563	-	99	57.143	Loxodonta_africana
ENSCING00000006888	-	96	56.448	ENSMFAG00000001625	ZC3H15	99	56.674	Macaca_fascicularis
ENSCING00000006888	-	96	56.448	ENSMMUG00000017248	ZC3H15	99	56.674	Macaca_mulatta
ENSCING00000006888	-	96	56.448	ENSMNEG00000031479	ZC3H15	99	56.674	Macaca_nemestrina
ENSCING00000006888	-	96	56.448	ENSMLEG00000033522	ZC3H15	99	56.674	Mandrillus_leucophaeus
ENSCING00000006888	-	96	53.009	ENSMAMG00000022415	zc3h15	99	53.812	Mastacembelus_armatus
ENSCING00000006888	-	96	55.769	ENSMZEG00005027294	zc3h15	99	56.512	Maylandia_zebra
ENSCING00000006888	-	77	56.928	ENSMGAG00000004447	ZC3H15	94	56.286	Meleagris_gallopavo
ENSCING00000006888	-	96	55.366	ENSMAUG00000016743	Zc3h15	99	55.972	Mesocricetus_auratus
ENSCING00000006888	-	96	56.691	ENSMICG00000014245	ZC3H15	99	56.674	Microcebus_murinus
ENSCING00000006888	-	96	55.854	ENSMOCG00000019087	Zc3h15	99	56.103	Microtus_ochrogaster
ENSCING00000006888	-	88	56.250	ENSMMOG00000006803	zc3h15	96	54.699	Mola_mola
ENSCING00000006888	-	96	52.844	ENSMALG00000022151	zc3h15	99	54.005	Monopterus_albus
ENSCING00000006888	-	96	55.854	MGP_CAROLIEiJ_G0023713	Zc3h15	99	56.440	Mus_caroli
ENSCING00000006888	-	96	55.854	ENSMUSG00000027091	Zc3h15	99	56.440	Mus_musculus
ENSCING00000006888	-	96	55.854	MGP_SPRETEiJ_G0024633	Zc3h15	99	56.440	Mus_spretus
ENSCING00000006888	-	96	56.691	ENSMPUG00000003521	ZC3H15	99	57.143	Mustela_putorius_furo
ENSCING00000006888	-	91	56.589	ENSMLUG00000007741	ZC3H15	99	56.359	Myotis_lucifugus
ENSCING00000006888	-	96	56.448	ENSNGAG00000005723	-	99	56.808	Nannospalax_galili
ENSCING00000006888	-	100	42.857	ENSNGAG00000020356	-	99	41.080	Nannospalax_galili
ENSCING00000006888	-	68	62.816	ENSNBRG00000008737	zc3h15	99	56.585	Neolamprologus_brichardi
ENSCING00000006888	-	96	56.448	ENSNLEG00000006446	ZC3H15	99	56.674	Nomascus_leucogenys
ENSCING00000006888	-	77	56.627	ENSOPRG00000015790	ZC3H15	94	56.647	Ochotona_princeps
ENSCING00000006888	-	96	56.585	ENSODEG00000010533	-	99	56.808	Octodon_degus
ENSCING00000006888	-	92	57.069	ENSONIG00000001456	zc3h15	99	56.308	Oreochromis_niloticus
ENSCING00000006888	-	91	55.270	ENSOANG00000015742	ZC3H15	94	55.860	Ornithorhynchus_anatinus
ENSCING00000006888	-	96	56.585	ENSOCUG00000011903	ZC3H15	99	56.808	Oryctolagus_cuniculus
ENSCING00000006888	-	96	54.015	ENSORLG00000018606	zc3h15	99	55.269	Oryzias_latipes
ENSCING00000006888	-	96	54.831	ENSOMEG00000015919	zc3h15	99	55.841	Oryzias_melastigma
ENSCING00000006888	-	96	56.416	ENSOGAG00000002182	ZC3H15	99	56.643	Otolemur_garnettii
ENSCING00000006888	-	96	56.448	ENSOARG00000016623	-	99	56.909	Ovis_aries
ENSCING00000006888	-	96	56.448	ENSPPAG00000042759	-	99	56.674	Pan_paniscus
ENSCING00000006888	-	96	55.961	ENSPPAG00000004038	-	99	56.206	Pan_paniscus
ENSCING00000006888	-	96	56.448	ENSPPRG00000024845	ZC3H15	99	56.909	Panthera_pardus
ENSCING00000006888	-	96	56.448	ENSPTIG00000012514	ZC3H15	99	56.909	Panthera_tigris_altaica
ENSCING00000006888	-	96	56.448	ENSPTRG00000012717	ZC3H15	99	56.674	Pan_troglodytes
ENSCING00000006888	-	96	56.448	ENSPANG00000007787	ZC3H15	99	56.674	Papio_anubis
ENSCING00000006888	-	96	55.370	ENSPKIG00000022132	zc3h15	99	57.931	Paramormyrops_kingsleyae
ENSCING00000006888	-	96	56.553	ENSPSIG00000014470	ZC3H15	99	57.143	Pelodiscus_sinensis
ENSCING00000006888	-	96	54.854	ENSPMGG00000001555	zc3h15	99	55.711	Periophthalmus_magnuspinnatus
ENSCING00000006888	-	96	56.341	ENSPEMG00000013093	-	99	56.573	Peromyscus_maniculatus_bairdii
ENSCING00000006888	-	96	54.237	ENSPMAG00000007532	zc3h15	99	55.478	Petromyzon_marinus
ENSCING00000006888	-	96	55.961	ENSPCIG00000019112	ZC3H15	99	56.674	Phascolarctos_cinereus
ENSCING00000006888	-	96	55.610	ENSPFOG00000006525	zc3h15	99	56.604	Poecilia_formosa
ENSCING00000006888	-	96	55.854	ENSPLAG00000010602	zc3h15	99	56.840	Poecilia_latipinna
ENSCING00000006888	-	96	55.854	ENSPMEG00000001074	zc3h15	99	56.604	Poecilia_mexicana
ENSCING00000006888	-	96	55.556	ENSPREG00000004618	zc3h15	99	56.542	Poecilia_reticulata
ENSCING00000006888	-	96	56.204	ENSPPYG00000013004	ZC3H15	99	56.440	Pongo_abelii
ENSCING00000006888	-	96	53.659	ENSPCAG00000008499	ZC3H15	99	53.882	Procavia_capensis
ENSCING00000006888	-	96	56.098	ENSPCOG00000005647	ZC3H15	99	56.573	Propithecus_coquereli
ENSCING00000006888	-	99	45.238	ENSPCOG00000020940	-	99	45.714	Propithecus_coquereli
ENSCING00000006888	-	92	56.545	ENSPVAG00000004828	ZC3H15	98	56.477	Pteropus_vampyrus
ENSCING00000006888	-	96	55.502	ENSPNYG00000010768	zc3h15	99	56.250	Pundamilia_nyererei
ENSCING00000006888	-	96	56.459	ENSPNAG00000010830	zc3h15	99	56.452	Pygocentrus_nattereri
ENSCING00000006888	-	96	50.365	ENSRNOG00000060002	AC115670.1	99	50.820	Rattus_norvegicus
ENSCING00000006888	-	96	55.854	ENSRNOG00000005256	Zc3h15	99	56.440	Rattus_norvegicus
ENSCING00000006888	-	95	54.321	ENSRBIG00000016836	ZC3H15	94	55.750	Rhinopithecus_bieti
ENSCING00000006888	-	96	56.448	ENSRROG00000028243	ZC3H15	99	56.674	Rhinopithecus_roxellana
ENSCING00000006888	-	96	56.691	ENSSBOG00000020564	ZC3H15	99	56.909	Saimiri_boliviensis_boliviensis
ENSCING00000006888	-	96	56.204	ENSSHAG00000008130	ZC3H15	99	56.909	Sarcophilus_harrisii
ENSCING00000006888	-	96	55.869	ENSSFOG00015002295	zc3h15	99	56.659	Scleropages_formosus
ENSCING00000006888	-	92	55.612	ENSSMAG00000001788	zc3h15	87	54.233	Scophthalmus_maximus
ENSCING00000006888	-	90	57.218	ENSSDUG00000014445	zc3h15	99	55.172	Seriola_dumerili
ENSCING00000006888	-	90	55.673	ENSSLDG00000017569	zc3h15	99	51.708	Seriola_lalandi_dorsalis
ENSCING00000006888	-	77	56.325	ENSSARG00000012071	ZC3H15	94	56.647	Sorex_araneus
ENSCING00000006888	-	95	51.707	ENSSPUG00000012016	ZC3H15	93	53.941	Sphenodon_punctatus
ENSCING00000006888	-	96	55.392	ENSSPAG00000023191	zc3h15	99	56.835	Stegastes_partitus
ENSCING00000006888	-	96	56.448	ENSSSCG00000016026	ZC3H15	99	56.909	Sus_scrofa
ENSCING00000006888	-	96	56.763	ENSTGUG00000011131	ZC3H15	99	57.209	Taeniopygia_guttata
ENSCING00000006888	-	93	55.641	ENSTRUG00000004988	zc3h15	99	56.057	Takifugu_rubripes
ENSCING00000006888	-	87	59.610	ENSTNIG00000009860	zc3h15	100	60.167	Tetraodon_nigroviridis
ENSCING00000006888	-	56	60.000	ENSTBEG00000015530	-	84	49.342	Tupaia_belangeri
ENSCING00000006888	-	96	55.769	ENSTTRG00000012425	ZC3H15	99	56.019	Tursiops_truncatus
ENSCING00000006888	-	90	55.469	ENSUAMG00000023433	ZC3H15	94	56.000	Ursus_americanus
ENSCING00000006888	-	96	56.448	ENSUMAG00000017161	ZC3H15	99	56.909	Ursus_maritimus
ENSCING00000006888	-	91	56.298	ENSVPAG00000006980	ZC3H15	98	56.000	Vicugna_pacos
ENSCING00000006888	-	91	55.270	ENSVVUG00000016921	ZC3H15	98	56.000	Vulpes_vulpes
ENSCING00000006888	-	96	55.474	ENSXETG00000013336	zc3h15	99	55.269	Xenopus_tropicalis
ENSCING00000006888	-	96	56.296	ENSXCOG00000014248	zc3h15	99	57.005	Xiphophorus_couchianus
ENSCING00000006888	-	96	55.156	ENSXMAG00000000989	zc3h15	99	55.684	Xiphophorus_maculatus