EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006903 (Gene tree)
Gene ID: 100180145
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 6460 bases
Position: chr9:245223-251682
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014187	Exo_endo_phos	PF03372.23	6.2e-13	1	1
ENSCINP00000033731	Exo_endo_phos	PF03372.23	2.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033599	-	1533	-	ENSCINP00000033731	464 (aa)	-	H2XVP7
ENSCINT00000014187	-	1785	-	ENSCINP00000014187	548 (aa)	-	F6YAA4

Gene Model

Click here to download ENSCING00000006903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006903	-	99	39.669	ENSG00000174840	PDE12	93	35.456	Homo_sapiens
ENSCING00000006903	-	99	39.203	ENSAPOG00000018806	pde12	93	36.824	Acanthochromis_polyacanthus
ENSCING00000006903	-	99	40.084	ENSAMEG00000011802	PDE12	98	35.889	Ailuropoda_melanoleuca
ENSCING00000006903	-	99	38.509	ENSACIG00000014918	pde12	93	37.345	Amphilophus_citrinellus
ENSCING00000006903	-	99	39.248	ENSAOCG00000016376	pde12	92	37.367	Amphiprion_ocellaris
ENSCING00000006903	-	99	39.248	ENSAPEG00000000756	pde12	92	37.367	Amphiprion_percula
ENSCING00000006903	-	100	37.660	ENSATEG00000003072	pde12	96	36.151	Anabas_testudineus
ENSCING00000006903	-	99	38.166	ENSACAG00000003067	PDE12	91	34.168	Anolis_carolinensis
ENSCING00000006903	-	99	39.959	ENSANAG00000011815	PDE12	93	36.379	Aotus_nancymaae
ENSCING00000006903	-	99	37.238	ENSACLG00000010127	pde12	95	35.714	Astatotilapia_calliptera
ENSCING00000006903	-	99	39.308	ENSAMXG00000020765	pde12	93	36.620	Astyanax_mexicanus
ENSCING00000006903	-	99	39.669	ENSBTAG00000015563	PDE12	93	35.972	Bos_taurus
ENSCING00000006903	-	99	40.289	ENSCJAG00000019905	PDE12	93	36.317	Callithrix_jacchus
ENSCING00000006903	-	99	40.083	ENSCAFG00000007792	PDE12	92	35.726	Canis_familiaris
ENSCING00000006903	-	99	40.083	ENSCAFG00020006692	PDE12	92	35.726	Canis_lupus_dingo
ENSCING00000006903	-	99	40.083	ENSCHIG00000014202	PDE12	93	36.021	Capra_hircus
ENSCING00000006903	-	99	39.256	ENSTSYG00000025750	PDE12	93	35.345	Carlito_syrichta
ENSCING00000006903	-	99	38.843	ENSCPOG00000001620	PDE12	93	34.940	Cavia_porcellus
ENSCING00000006903	-	99	33.954	ENSCCAG00000031290	PDE12	92	31.897	Cebus_capucinus
ENSCING00000006903	-	99	39.669	ENSCATG00000044539	PDE12	93	35.628	Cercocebus_atys
ENSCING00000006903	-	99	38.223	ENSCLAG00000004864	PDE12	93	35.000	Chinchilla_lanigera
ENSCING00000006903	-	99	39.752	ENSCSAG00000012275	PDE12	93	35.690	Chlorocebus_sabaeus
ENSCING00000006903	-	82	42.782	ENSCHOG00000002188	-	60	42.782	Choloepus_hoffmanni
ENSCING00000006903	-	86	42.643	ENSCHOG00000012173	-	93	42.643	Choloepus_hoffmanni
ENSCING00000006903	-	99	38.526	ENSCPBG00000012353	PDE12	87	36.347	Chrysemys_picta_bellii
ENSCING00000006903	-	54	71.825	ENSCSAVG00000001453	-	99	72.692	Ciona_savignyi
ENSCING00000006903	-	99	39.876	ENSCANG00000038723	PDE12	93	35.628	Colobus_angolensis_palliatus
ENSCING00000006903	-	99	39.463	ENSCGRG00001021836	Pde12	93	36.379	Cricetulus_griseus_chok1gshd
ENSCING00000006903	-	99	39.588	ENSCGRG00000012319	Pde12	93	36.851	Cricetulus_griseus_crigri
ENSCING00000006903	-	100	35.102	ENSCSEG00000018538	pde12	98	34.386	Cynoglossus_semilaevis
ENSCING00000006903	-	80	42.857	ENSCVAG00000003624	pde12	84	42.857	Cyprinodon_variegatus
ENSCING00000006903	-	100	37.421	ENSDARG00000030964	pde12	91	35.791	Danio_rerio
ENSCING00000006903	-	99	39.431	ENSDNOG00000048413	PDE12	93	35.897	Dasypus_novemcinctus
ENSCING00000006903	-	99	39.256	ENSDORG00000004313	Pde12	93	35.517	Dipodomys_ordii
ENSCING00000006903	-	98	34.091	FBgn0051759	CG31759	96	31.076	Drosophila_melanogaster
ENSCING00000006903	-	78	37.671	ENSEBUG00000004803	pde12	73	42.017	Eptatretus_burgeri
ENSCING00000006903	-	99	39.669	ENSEASG00005000644	PDE12	93	35.628	Equus_asinus_asinus
ENSCING00000006903	-	99	39.669	ENSECAG00000005326	PDE12	93	35.628	Equus_caballus
ENSCING00000006903	-	50	47.191	ENSEEUG00000010406	-	53	46.591	Erinaceus_europaeus
ENSCING00000006903	-	99	38.186	ENSELUG00000014391	pde12	91	36.071	Esox_lucius
ENSCING00000006903	-	99	39.669	ENSFCAG00000031696	PDE12	93	35.862	Felis_catus
ENSCING00000006903	-	99	40.211	ENSFALG00000008401	PDE12	97	39.666	Ficedula_albicollis
ENSCING00000006903	-	99	39.463	ENSFDAG00000021278	PDE12	93	35.628	Fukomys_damarensis
ENSCING00000006903	-	92	36.486	ENSFHEG00000018967	pde12	84	33.962	Fundulus_heteroclitus
ENSCING00000006903	-	99	35.343	ENSGMOG00000018041	pde12	96	34.464	Gadus_morhua
ENSCING00000006903	-	99	38.608	ENSGALG00000052355	PDE12	93	36.445	Gallus_gallus
ENSCING00000006903	-	99	37.263	ENSGAFG00000002045	pde12	92	35.663	Gambusia_affinis
ENSCING00000006903	-	100	36.952	ENSGACG00000003914	pde12	92	36.185	Gasterosteus_aculeatus
ENSCING00000006903	-	99	39.158	ENSGAGG00000010266	PDE12	87	36.709	Gopherus_agassizii
ENSCING00000006903	-	99	39.876	ENSGGOG00000003312	PDE12	93	35.800	Gorilla_gorilla
ENSCING00000006903	-	99	37.238	ENSHBUG00000023370	pde12	93	36.250	Haplochromis_burtoni
ENSCING00000006903	-	99	39.256	ENSHGLG00000005661	PDE12	93	35.345	Heterocephalus_glaber_female
ENSCING00000006903	-	99	39.256	ENSHGLG00100001136	PDE12	93	35.345	Heterocephalus_glaber_male
ENSCING00000006903	-	99	37.782	ENSHCOG00000013749	pde12	92	36.252	Hippocampus_comes
ENSCING00000006903	-	99	39.407	ENSIPUG00000007123	Pde12	92	37.478	Ictalurus_punctatus
ENSCING00000006903	-	99	39.463	ENSSTOG00000007861	PDE12	93	35.628	Ictidomys_tridecemlineatus
ENSCING00000006903	-	99	39.425	ENSJJAG00000006038	Pde12	92	35.103	Jaculus_jaculus
ENSCING00000006903	-	99	39.709	ENSKMAG00000018523	pde12	94	38.366	Kryptolebias_marmoratus
ENSCING00000006903	-	99	37.238	ENSLBEG00000009762	PDE12	92	35.993	Labrus_bergylta
ENSCING00000006903	-	99	34.155	ENSLBEG00000026775	pde12	92	34.507	Labrus_bergylta
ENSCING00000006903	-	99	39.746	ENSLACG00000015492	PDE12	92	37.455	Latimeria_chalumnae
ENSCING00000006903	-	99	38.559	ENSLOCG00000013277	pde12	91	36.136	Lepisosteus_oculatus
ENSCING00000006903	-	99	38.843	ENSLAFG00000002821	PDE12	99	35.355	Loxodonta_africana
ENSCING00000006903	-	99	39.669	ENSMFAG00000030966	PDE12	93	35.628	Macaca_fascicularis
ENSCING00000006903	-	99	39.669	ENSMMUG00000004052	PDE12	93	35.628	Macaca_mulatta
ENSCING00000006903	-	99	39.669	ENSMNEG00000030068	PDE12	93	35.628	Macaca_nemestrina
ENSCING00000006903	-	99	39.669	ENSMLEG00000036137	PDE12	93	35.628	Mandrillus_leucophaeus
ENSCING00000006903	-	99	37.422	ENSMAMG00000014415	pde12	93	36.429	Mastacembelus_armatus
ENSCING00000006903	-	99	36.910	ENSMZEG00005028202	-	96	35.063	Maylandia_zebra
ENSCING00000006903	-	99	37.238	ENSMZEG00005016132	pde12	95	35.714	Maylandia_zebra
ENSCING00000006903	-	70	44.308	ENSMGAG00000006449	PDE12	99	44.582	Meleagris_gallopavo
ENSCING00000006903	-	99	39.139	ENSMAUG00000000442	Pde12	96	36.964	Mesocricetus_auratus
ENSCING00000006903	-	99	38.017	ENSMICG00000005723	PDE12	93	34.251	Microcebus_murinus
ENSCING00000006903	-	99	40.208	ENSMOCG00000020734	Pde12	93	36.300	Microtus_ochrogaster
ENSCING00000006903	-	100	38.669	ENSMMOG00000013636	pde12	93	37.900	Mola_mola
ENSCING00000006903	-	99	37.500	ENSMODG00000000155	PDE12	94	35.529	Monodelphis_domestica
ENSCING00000006903	-	99	37.797	ENSMALG00000022647	pde12	92	35.778	Monopterus_albus
ENSCING00000006903	-	99	39.381	MGP_CAROLIEiJ_G0019032	Pde12	93	36.145	Mus_caroli
ENSCING00000006903	-	99	39.588	ENSMUSG00000043702	Pde12	93	36.317	Mus_musculus
ENSCING00000006903	-	99	39.794	MGP_PahariEiJ_G0030049	Pde12	93	36.489	Mus_pahari
ENSCING00000006903	-	99	39.381	MGP_SPRETEiJ_G0019916	Pde12	93	36.317	Mus_spretus
ENSCING00000006903	-	99	39.463	ENSMPUG00000016869	PDE12	93	35.456	Mustela_putorius_furo
ENSCING00000006903	-	99	39.463	ENSMLUG00000026487	PDE12	93	36.661	Myotis_lucifugus
ENSCING00000006903	-	99	40.000	ENSNGAG00000001228	Pde12	93	35.889	Nannospalax_galili
ENSCING00000006903	-	99	36.266	ENSNBRG00000015769	pde12	63	34.705	Neolamprologus_brichardi
ENSCING00000006903	-	99	39.463	ENSNLEG00000007269	-	93	35.456	Nomascus_leucogenys
ENSCING00000006903	-	97	39.496	ENSNLEG00000034833	-	77	39.496	Nomascus_leucogenys
ENSCING00000006903	-	99	38.627	ENSMEUG00000006786	PDE12	93	35.284	Notamacropus_eugenii
ENSCING00000006903	-	99	38.037	ENSOPRG00000015273	PDE12	93	34.477	Ochotona_princeps
ENSCING00000006903	-	99	39.050	ENSODEG00000006268	PDE12	93	35.112	Octodon_degus
ENSCING00000006903	-	99	37.917	ENSONIG00000004293	pde12	98	36.655	Oreochromis_niloticus
ENSCING00000006903	-	92	37.778	ENSOANG00000012885	PDE12	97	34.249	Ornithorhynchus_anatinus
ENSCING00000006903	-	99	39.588	ENSOCUG00000000823	PDE12	93	35.849	Oryctolagus_cuniculus
ENSCING00000006903	-	100	36.853	ENSORLG00000017444	pde12	93	36.057	Oryzias_latipes
ENSCING00000006903	-	100	36.439	ENSORLG00020010469	pde12	93	35.879	Oryzias_latipes_hni
ENSCING00000006903	-	100	36.853	ENSORLG00015004093	pde12	93	36.412	Oryzias_latipes_hsok
ENSCING00000006903	-	100	36.383	ENSOMEG00000020900	pde12	93	35.179	Oryzias_melastigma
ENSCING00000006903	-	99	39.050	ENSOGAG00000024093	PDE12	93	35.456	Otolemur_garnettii
ENSCING00000006903	-	99	40.083	ENSOARG00000013642	PDE12	99	36.508	Ovis_aries
ENSCING00000006903	-	99	39.256	ENSPPAG00000034712	PDE12	93	35.284	Pan_paniscus
ENSCING00000006903	-	99	39.669	ENSPPRG00000011738	PDE12	93	35.862	Panthera_pardus
ENSCING00000006903	-	99	38.776	ENSPTIG00000019166	PDE12	90	38.776	Panthera_tigris_altaica
ENSCING00000006903	-	99	39.463	ENSPTRG00000030221	PDE12	93	35.456	Pan_troglodytes
ENSCING00000006903	-	99	39.256	ENSPANG00000007324	PDE12	93	35.284	Papio_anubis
ENSCING00000006903	-	99	37.953	ENSPKIG00000025354	pde12	92	35.432	Paramormyrops_kingsleyae
ENSCING00000006903	-	99	38.947	ENSPSIG00000004926	PDE12	87	35.986	Pelodiscus_sinensis
ENSCING00000006903	-	100	39.224	ENSPMGG00000006742	pde12	95	36.898	Periophthalmus_magnuspinnatus
ENSCING00000006903	-	86	41.791	ENSPEMG00000007259	Pde12	74	41.791	Peromyscus_maniculatus_bairdii
ENSCING00000006903	-	99	38.223	ENSPFOG00000011864	pde12	92	35.929	Poecilia_formosa
ENSCING00000006903	-	94	38.063	ENSPLAG00000023871	pde12	80	38.063	Poecilia_latipinna
ENSCING00000006903	-	99	38.478	ENSPMEG00000005674	pde12	92	36.201	Poecilia_mexicana
ENSCING00000006903	-	99	38.266	ENSPREG00000022831	pde12	92	36.022	Poecilia_reticulata
ENSCING00000006903	-	99	39.752	ENSPPYG00000013769	PDE12	93	35.406	Pongo_abelii
ENSCING00000006903	-	99	38.223	ENSPCOG00000026004	PDE12	93	34.251	Propithecus_coquereli
ENSCING00000006903	-	99	39.463	ENSPVAG00000008885	PDE12	93	36.222	Pteropus_vampyrus
ENSCING00000006903	-	99	37.238	ENSPNYG00000013258	pde12	93	36.250	Pundamilia_nyererei
ENSCING00000006903	-	99	38.983	ENSPNAG00000029032	pde12	93	37.030	Pygocentrus_nattereri
ENSCING00000006903	-	99	40.000	ENSRNOG00000059442	Pde12	93	36.833	Rattus_norvegicus
ENSCING00000006903	-	99	39.669	ENSRBIG00000040704	PDE12	93	35.628	Rhinopithecus_bieti
ENSCING00000006903	-	99	39.669	ENSRROG00000031279	PDE12	93	35.628	Rhinopithecus_roxellana
ENSCING00000006903	-	99	40.166	ENSSBOG00000023974	PDE12	93	36.207	Saimiri_boliviensis_boliviensis
ENSCING00000006903	-	82	40.950	ENSSFOG00015003468	pde12	85	40.950	Scleropages_formosus
ENSCING00000006903	-	100	37.045	ENSSMAG00000003258	pde12	93	34.392	Scophthalmus_maximus
ENSCING00000006903	-	100	36.364	ENSSDUG00000020470	pde12	93	35.575	Seriola_dumerili
ENSCING00000006903	-	100	36.864	ENSSLDG00000019833	pde12	92	35.398	Seriola_lalandi_dorsalis
ENSCING00000006903	-	99	39.463	ENSSARG00000007201	PDE12	93	35.875	Sorex_araneus
ENSCING00000006903	-	99	37.759	ENSSPAG00000014980	pde12	93	36.185	Stegastes_partitus
ENSCING00000006903	-	69	40.125	ENSSSCG00000034476	-	72	40.125	Sus_scrofa
ENSCING00000006903	-	99	39.050	ENSSSCG00000011465	-	93	35.456	Sus_scrofa
ENSCING00000006903	-	83	41.927	ENSTGUG00000007290	PDE12	99	41.927	Taeniopygia_guttata
ENSCING00000006903	-	100	38.105	ENSTRUG00000005159	pde12	92	36.429	Takifugu_rubripes
ENSCING00000006903	-	100	36.743	ENSTNIG00000017497	pde12	93	36.185	Tetraodon_nigroviridis
ENSCING00000006903	-	67	44.516	ENSTBEG00000008202	PDE12	51	44.516	Tupaia_belangeri
ENSCING00000006903	-	99	39.463	ENSTTRG00000014707	PDE12	93	35.456	Tursiops_truncatus
ENSCING00000006903	-	99	39.463	ENSUAMG00000020634	-	93	35.628	Ursus_americanus
ENSCING00000006903	-	70	30.073	ENSUAMG00000008368	-	85	30.244	Ursus_americanus
ENSCING00000006903	-	93	39.381	ENSUMAG00000021906	PDE12	99	39.381	Ursus_maritimus
ENSCING00000006903	-	99	39.876	ENSVVUG00000020335	PDE12	91	35.678	Vulpes_vulpes
ENSCING00000006903	-	100	36.422	ENSXETG00000008653	pde12	95	35.262	Xenopus_tropicalis
ENSCING00000006903	-	99	38.526	ENSXCOG00000000407	pde12	95	36.738	Xiphophorus_couchianus
ENSCING00000006903	-	99	38.316	ENSXMAG00000013370	pde12	93	36.559	Xiphophorus_maculatus