EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000006953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 5557 bases
Position: chr9:172752-178308
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014270	EST1	PF10374.9	1.5e-22	1	1
ENSCINP00000014270	EST1_DNA_bind	PF10373.9	3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014270	-	1298	-	ENSCINP00000014270	325 (aa)	-	F6V093

Gene Model

Click here to download ENSCING00000006953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000006953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000006953	-	94	53.746	ENSG00000116698	SMG7	85	52.147	Homo_sapiens
ENSCING00000006953	-	94	53.746	ENSANAG00000028114	SMG7	85	51.829	Aotus_nancymaae
ENSCING00000006953	-	96	53.376	ENSCJAG00000005135	SMG7	87	51.497	Callithrix_jacchus
ENSCING00000006953	-	95	53.247	ENSCAFG00020015475	SMG7	85	51.220	Canis_lupus_dingo
ENSCING00000006953	-	94	53.770	ENSTSYG00000002667	SMG7	79	52.174	Carlito_syrichta
ENSCING00000006953	-	94	53.746	ENSCCAG00000028596	SMG7	85	51.829	Cebus_capucinus
ENSCING00000006953	-	94	53.746	ENSCATG00000011063	SMG7	85	51.829	Cercocebus_atys
ENSCING00000006953	-	95	53.571	ENSCANG00000015680	SMG7	85	51.829	Colobus_angolensis_palliatus
ENSCING00000006953	-	50	52.469	ENSCSEG00000007392	-	88	52.469	Cynoglossus_semilaevis
ENSCING00000006953	-	99	52.174	ENSGAFG00000019000	smg7	56	51.250	Gambusia_affinis
ENSCING00000006953	-	50	51.220	ENSGAGG00000024208	-	84	51.220	Gopherus_agassizii
ENSCING00000006953	-	94	53.746	ENSGGOG00000002342	SMG7	81	51.220	Gorilla_gorilla
ENSCING00000006953	-	50	42.331	ENSJJAG00000000309	-	87	42.331	Jaculus_jaculus
ENSCING00000006953	-	94	53.746	ENSMFAG00000031653	SMG7	85	51.829	Macaca_fascicularis
ENSCING00000006953	-	94	53.746	ENSMNEG00000034798	SMG7	85	51.829	Macaca_nemestrina
ENSCING00000006953	-	95	53.571	ENSMICG00000007145	SMG7	82	51.829	Microcebus_murinus
ENSCING00000006953	-	97	53.185	ENSORLG00000007314	smg7	71	51.875	Oryzias_latipes
ENSCING00000006953	-	97	53.651	ENSORLG00020015779	smg7	70	52.201	Oryzias_latipes_hni
ENSCING00000006953	-	94	53.746	ENSPPAG00000031619	SMG7	85	51.829	Pan_paniscus
ENSCING00000006953	-	94	53.746	ENSPTRG00000001764	SMG7	85	51.829	Pan_troglodytes
ENSCING00000006953	-	54	50.282	ENSPMGG00000002179	-	94	50.282	Periophthalmus_magnuspinnatus
ENSCING00000006953	-	94	53.420	ENSPCIG00000003786	SMG7	87	51.829	Phascolarctos_cinereus
ENSCING00000006953	-	95	53.571	ENSPCOG00000011996	SMG7	77	51.829	Propithecus_coquereli
ENSCING00000006953	-	94	53.746	ENSSBOG00000023454	SMG7	85	52.147	Saimiri_boliviensis_boliviensis
ENSCING00000006953	-	51	50.898	ENSSLDG00000003750	-	96	50.898	Seriola_lalandi_dorsalis
ENSCING00000006953	-	50	51.534	ENSTRUG00000003612	-	86	51.534	Takifugu_rubripes