EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007024 (Gene tree)
Gene ID: 100186818
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5718 bases
Position: chr7:2609088-2614805
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014424	RNA_pol_Rpc82	PF05645.13	2.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014424	-	1621	-	ENSCINP00000014424	520 (aa)	-	F7AE51

Gene Model

Click here to download ENSCING00000007024's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007024	-	99	47.458	ENSG00000186141	POLR3C	99	47.458	Homo_sapiens
ENSCING00000007024	-	100	42.153	ENSAPOG00000008722	polr3c	99	42.336	Acanthochromis_polyacanthus
ENSCING00000007024	-	99	47.655	ENSAMEG00000017531	POLR3C	99	47.092	Ailuropoda_melanoleuca
ENSCING00000007024	-	100	41.742	ENSACIG00000008064	polr3c	100	41.742	Amphilophus_citrinellus
ENSCING00000007024	-	100	43.258	ENSAOCG00000011695	polr3c	99	43.071	Amphiprion_ocellaris
ENSCING00000007024	-	100	43.258	ENSAPEG00000004426	polr3c	99	43.071	Amphiprion_percula
ENSCING00000007024	-	100	42.752	ENSATEG00000023618	polr3c	92	42.831	Anabas_testudineus
ENSCING00000007024	-	99	47.834	ENSANAG00000036434	POLR3C	99	47.834	Aotus_nancymaae
ENSCING00000007024	-	100	41.379	ENSACLG00000019970	polr3c	99	41.016	Astatotilapia_calliptera
ENSCING00000007024	-	100	42.569	ENSAMXG00000008273	polr3c	99	42.202	Astyanax_mexicanus
ENSCING00000007024	-	99	48.030	ENSBTAG00000021637	POLR3C	99	48.030	Bos_taurus
ENSCING00000007024	-	99	47.834	ENSCJAG00000002314	POLR3C	99	47.834	Callithrix_jacchus
ENSCING00000007024	-	99	47.467	ENSCAFG00000011257	POLR3C	99	47.266	Canis_familiaris
ENSCING00000007024	-	95	47.852	ENSCAFG00020020066	POLR3C	99	47.266	Canis_lupus_dingo
ENSCING00000007024	-	99	48.218	ENSCHIG00000022431	POLR3C	99	48.218	Capra_hircus
ENSCING00000007024	-	99	48.030	ENSTSYG00000002292	POLR3C	99	47.467	Carlito_syrichta
ENSCING00000007024	-	95	39.645	ENSCAPG00000011559	POLR3C	100	39.645	Cavia_aperea
ENSCING00000007024	-	99	47.655	ENSCPOG00000004654	POLR3C	99	47.655	Cavia_porcellus
ENSCING00000007024	-	99	47.646	ENSCCAG00000027077	POLR3C	99	47.646	Cebus_capucinus
ENSCING00000007024	-	99	47.834	ENSCATG00000040166	POLR3C	99	47.834	Cercocebus_atys
ENSCING00000007024	-	98	49.213	ENSCLAG00000001652	POLR3C	99	49.213	Chinchilla_lanigera
ENSCING00000007024	-	99	48.023	ENSCSAG00000001762	POLR3C	99	48.023	Chlorocebus_sabaeus
ENSCING00000007024	-	99	46.529	ENSCHOG00000006911	POLR3C	99	45.966	Choloepus_hoffmanni
ENSCING00000007024	-	99	47.092	ENSCPBG00000007883	POLR3C	99	47.092	Chrysemys_picta_bellii
ENSCING00000007024	-	99	77.083	ENSCSAVG00000008586	-	99	76.515	Ciona_savignyi
ENSCING00000007024	-	99	47.834	ENSCANG00000032538	POLR3C	99	47.834	Colobus_angolensis_palliatus
ENSCING00000007024	-	99	47.081	ENSCGRG00001005471	Polr3c	99	46.704	Cricetulus_griseus_chok1gshd
ENSCING00000007024	-	99	47.081	ENSCGRG00000016787	Polr3c	99	46.704	Cricetulus_griseus_crigri
ENSCING00000007024	-	99	43.123	ENSCSEG00000002425	polr3c	98	43.123	Cynoglossus_semilaevis
ENSCING00000007024	-	100	41.198	ENSCVAG00000009443	polr3c	100	41.261	Cyprinodon_variegatus
ENSCING00000007024	-	100	41.198	ENSCVAG00000022458	polr3c	100	41.261	Cyprinodon_variegatus
ENSCING00000007024	-	100	45.203	ENSDARG00000057562	polr3c	99	44.834	Danio_rerio
ENSCING00000007024	-	72	48.953	ENSDNOG00000012149	POLR3C	99	48.168	Dasypus_novemcinctus
ENSCING00000007024	-	99	46.893	ENSDORG00000013430	Polr3c	99	46.893	Dipodomys_ordii
ENSCING00000007024	-	85	47.162	ENSETEG00000017696	POLR3C	85	47.162	Echinops_telfairi
ENSCING00000007024	-	99	48.030	ENSEASG00005007417	POLR3C	99	47.467	Equus_asinus_asinus
ENSCING00000007024	-	99	46.717	ENSECAG00000023713	POLR3C	99	46.154	Equus_caballus
ENSCING00000007024	-	99	45.574	ENSEEUG00000011124	POLR3C	99	45.574	Erinaceus_europaeus
ENSCING00000007024	-	99	45.826	ENSELUG00000013209	polr3c	99	45.455	Esox_lucius
ENSCING00000007024	-	99	47.925	ENSFCAG00000013360	POLR3C	99	47.092	Felis_catus
ENSCING00000007024	-	99	47.655	ENSFDAG00000021078	POLR3C	99	47.655	Fukomys_damarensis
ENSCING00000007024	-	100	42.468	ENSFHEG00000000872	polr3c	100	42.105	Fundulus_heteroclitus
ENSCING00000007024	-	99	41.882	ENSGMOG00000018937	polr3c	99	41.882	Gadus_morhua
ENSCING00000007024	-	85	48.485	ENSGALG00000052515	-	100	48.701	Gallus_gallus
ENSCING00000007024	-	99	42.048	ENSGAFG00000014721	polr3c	99	41.682	Gambusia_affinis
ENSCING00000007024	-	99	43.738	ENSGACG00000011829	polr3c	99	43.551	Gasterosteus_aculeatus
ENSCING00000007024	-	99	47.932	ENSGAGG00000010176	POLR3C	99	47.932	Gopherus_agassizii
ENSCING00000007024	-	99	47.081	ENSGGOG00000007279	POLR3C	99	47.081	Gorilla_gorilla
ENSCING00000007024	-	100	41.379	ENSHBUG00000003619	polr3c	99	41.016	Haplochromis_burtoni
ENSCING00000007024	-	99	47.280	ENSHGLG00000014978	POLR3C	99	47.280	Heterocephalus_glaber_female
ENSCING00000007024	-	99	47.280	ENSHGLG00100015620	POLR3C	99	47.280	Heterocephalus_glaber_male
ENSCING00000007024	-	100	43.203	ENSHCOG00000000823	polr3c	99	43.017	Hippocampus_comes
ENSCING00000007024	-	100	44.809	ENSIPUG00000008657	polr3c	99	44.627	Ictalurus_punctatus
ENSCING00000007024	-	99	47.280	ENSSTOG00000014601	POLR3C	99	47.280	Ictidomys_tridecemlineatus
ENSCING00000007024	-	99	46.792	ENSJJAG00000011447	Polr3c	99	46.792	Jaculus_jaculus
ENSCING00000007024	-	100	41.423	ENSKMAG00000001574	polr3c	99	41.606	Kryptolebias_marmoratus
ENSCING00000007024	-	100	42.909	ENSLBEG00000026567	polr3c	99	42.545	Labrus_bergylta
ENSCING00000007024	-	99	42.803	ENSLACG00000017216	POLR3C	99	44.173	Latimeria_chalumnae
ENSCING00000007024	-	99	38.716	ENSLOCG00000006400	polr3c	99	38.716	Lepisosteus_oculatus
ENSCING00000007024	-	99	48.218	ENSLAFG00000029485	POLR3C	99	48.218	Loxodonta_africana
ENSCING00000007024	-	99	47.834	ENSMFAG00000040338	POLR3C	99	47.834	Macaca_fascicularis
ENSCING00000007024	-	99	47.834	ENSMMUG00000016735	POLR3C	99	47.834	Macaca_mulatta
ENSCING00000007024	-	99	47.834	ENSMNEG00000040944	POLR3C	99	47.834	Macaca_nemestrina
ENSCING00000007024	-	99	47.834	ENSMLEG00000031091	POLR3C	99	47.834	Mandrillus_leucophaeus
ENSCING00000007024	-	99	42.077	ENSMAMG00000014770	polr3c	99	42.077	Mastacembelus_armatus
ENSCING00000007024	-	100	41.016	ENSMZEG00005015882	polr3c	99	41.016	Maylandia_zebra
ENSCING00000007024	-	77	41.849	ENSMAUG00000021521	-	98	41.606	Mesocricetus_auratus
ENSCING00000007024	-	99	46.893	ENSMAUG00000001454	-	99	46.893	Mesocricetus_auratus
ENSCING00000007024	-	99	47.655	ENSMICG00000034253	POLR3C	99	47.655	Microcebus_murinus
ENSCING00000007024	-	99	44.318	ENSMOCG00000000997	Polr3c	99	44.129	Microtus_ochrogaster
ENSCING00000007024	-	99	42.173	ENSMMOG00000003989	polr3c	99	42.144	Mola_mola
ENSCING00000007024	-	99	47.358	ENSMODG00000018745	-	73	47.170	Monodelphis_domestica
ENSCING00000007024	-	99	41.499	ENSMALG00000000156	polr3c	99	41.499	Monopterus_albus
ENSCING00000007024	-	99	47.081	MGP_CAROLIEiJ_G0025390	Polr3c	99	46.704	Mus_caroli
ENSCING00000007024	-	99	47.180	ENSMUSG00000028099	Polr3c	99	47.180	Mus_musculus
ENSCING00000007024	-	99	46.893	MGP_PahariEiJ_G0026835	Polr3c	99	46.516	Mus_pahari
ENSCING00000007024	-	99	46.805	MGP_SPRETEiJ_G0026337	Polr3c	99	46.429	Mus_spretus
ENSCING00000007024	-	99	47.753	ENSMPUG00000000656	POLR3C	99	47.191	Mustela_putorius_furo
ENSCING00000007024	-	99	48.037	ENSMLUG00000004060	POLR3C	99	47.477	Myotis_lucifugus
ENSCING00000007024	-	99	47.269	ENSNGAG00000013090	Polr3c	99	46.893	Nannospalax_galili
ENSCING00000007024	-	100	41.379	ENSNBRG00000003707	polr3c	99	41.198	Neolamprologus_brichardi
ENSCING00000007024	-	99	47.269	ENSNLEG00000005645	POLR3C	99	47.269	Nomascus_leucogenys
ENSCING00000007024	-	85	50.413	ENSMEUG00000012664	POLR3C	85	50.413	Notamacropus_eugenii
ENSCING00000007024	-	99	46.816	ENSOPRG00000004244	POLR3C	99	46.629	Ochotona_princeps
ENSCING00000007024	-	99	46.629	ENSODEG00000000304	POLR3C	99	46.442	Octodon_degus
ENSCING00000007024	-	100	42.105	ENSONIG00000006370	polr3c	99	42.105	Oreochromis_niloticus
ENSCING00000007024	-	66	35.593	ENSOANG00000000559	-	100	35.294	Ornithorhynchus_anatinus
ENSCING00000007024	-	99	46.717	ENSOCUG00000003050	POLR3C	99	46.717	Oryctolagus_cuniculus
ENSCING00000007024	-	99	44.199	ENSORLG00000010133	polr3c	99	44.015	Oryzias_latipes
ENSCING00000007024	-	99	44.037	ENSORLG00020009245	polr3c	99	43.853	Oryzias_latipes_hni
ENSCING00000007024	-	99	43.831	ENSORLG00015015223	polr3c	99	43.646	Oryzias_latipes_hsok
ENSCING00000007024	-	100	43.119	ENSOMEG00000008558	polr3c	99	42.936	Oryzias_melastigma
ENSCING00000007024	-	99	47.280	ENSOGAG00000000209	POLR3C	99	46.904	Otolemur_garnettii
ENSCING00000007024	-	99	48.218	ENSOARG00000020588	POLR3C	99	48.218	Ovis_aries
ENSCING00000007024	-	99	47.458	ENSPPAG00000025184	POLR3C	99	47.458	Pan_paniscus
ENSCING00000007024	-	99	47.655	ENSPPRG00000008809	POLR3C	99	47.092	Panthera_pardus
ENSCING00000007024	-	99	47.655	ENSPTIG00000009916	POLR3C	99	47.092	Panthera_tigris_altaica
ENSCING00000007024	-	99	47.458	ENSPTRG00000001208	POLR3C	99	47.458	Pan_troglodytes
ENSCING00000007024	-	99	47.834	ENSPANG00000019404	POLR3C	99	47.834	Papio_anubis
ENSCING00000007024	-	99	43.889	ENSPKIG00000014883	polr3c	99	43.519	Paramormyrops_kingsleyae
ENSCING00000007024	-	99	47.932	ENSPSIG00000004694	POLR3C	99	47.744	Pelodiscus_sinensis
ENSCING00000007024	-	99	42.857	ENSPMGG00000007761	polr3c	99	42.486	Periophthalmus_magnuspinnatus
ENSCING00000007024	-	99	46.992	ENSPEMG00000016322	Polr3c	99	46.992	Peromyscus_maniculatus_bairdii
ENSCING00000007024	-	99	44.630	ENSPMAG00000006993	polr3c	99	44.630	Petromyzon_marinus
ENSCING00000007024	-	99	47.170	ENSPCIG00000011954	POLR3C	99	46.792	Phascolarctos_cinereus
ENSCING00000007024	-	100	42.029	ENSPFOG00000014106	polr3c	100	41.667	Poecilia_formosa
ENSCING00000007024	-	100	43.178	ENSPLAG00000018932	polr3c	100	43.364	Poecilia_latipinna
ENSCING00000007024	-	93	50.000	ENSPMEG00000023273	polr3c	100	41.486	Poecilia_mexicana
ENSCING00000007024	-	100	42.202	ENSPREG00000017050	polr3c	100	41.839	Poecilia_reticulata
ENSCING00000007024	-	99	47.646	ENSPPYG00000000936	POLR3C	99	47.646	Pongo_abelii
ENSCING00000007024	-	90	47.095	ENSPCAG00000010501	POLR3C	99	46.473	Procavia_capensis
ENSCING00000007024	-	87	50.806	ENSPCOG00000024937	POLR3C	99	50.806	Propithecus_coquereli
ENSCING00000007024	-	99	47.368	ENSPVAG00000014483	POLR3C	99	47.368	Pteropus_vampyrus
ENSCING00000007024	-	100	41.379	ENSPNYG00000004504	polr3c	99	41.016	Pundamilia_nyererei
ENSCING00000007024	-	98	43.575	ENSPNAG00000018675	polr3c	99	43.407	Pygocentrus_nattereri
ENSCING00000007024	-	99	47.180	ENSRNOG00000033560	Polr3c	99	46.805	Rattus_norvegicus
ENSCING00000007024	-	99	48.023	ENSRBIG00000035432	POLR3C	99	48.023	Rhinopithecus_bieti
ENSCING00000007024	-	99	48.023	ENSRROG00000039959	POLR3C	99	48.023	Rhinopithecus_roxellana
ENSCING00000007024	-	89	46.122	ENSSBOG00000028429	POLR3C	98	46.122	Saimiri_boliviensis_boliviensis
ENSCING00000007024	-	99	47.170	ENSSHAG00000018565	POLR3C	99	46.792	Sarcophilus_harrisii
ENSCING00000007024	-	99	46.269	ENSSFOG00015021863	polr3c	99	46.269	Scleropages_formosus
ENSCING00000007024	-	100	42.937	ENSSMAG00000016000	polr3c	99	43.123	Scophthalmus_maximus
ENSCING00000007024	-	100	43.657	ENSSDUG00000006590	polr3c	99	43.470	Seriola_dumerili
ENSCING00000007024	-	100	43.715	ENSSLDG00000015614	polr3c	99	43.715	Seriola_lalandi_dorsalis
ENSCING00000007024	-	63	51.497	ENSSARG00000014380	POLR3C	98	51.497	Sorex_araneus
ENSCING00000007024	-	99	46.805	ENSSPUG00000001834	POLR3C	99	46.805	Sphenodon_punctatus
ENSCING00000007024	-	100	43.340	ENSSPAG00000022520	polr3c	99	43.340	Stegastes_partitus
ENSCING00000007024	-	99	47.655	ENSSSCG00000006691	POLR3C	99	47.092	Sus_scrofa
ENSCING00000007024	-	99	42.991	ENSTGUG00000016941	POLR3C	99	42.991	Taeniopygia_guttata
ENSCING00000007024	-	100	41.959	ENSTRUG00000010726	polr3c	100	42.329	Takifugu_rubripes
ENSCING00000007024	-	100	43.831	ENSTNIG00000019501	polr3c	100	43.911	Tetraodon_nigroviridis
ENSCING00000007024	-	73	47.959	ENSTBEG00000015610	POLR3C	97	46.939	Tupaia_belangeri
ENSCING00000007024	-	99	47.655	ENSUAMG00000021906	POLR3C	99	47.092	Ursus_americanus
ENSCING00000007024	-	99	47.655	ENSUMAG00000010180	POLR3C	99	47.092	Ursus_maritimus
ENSCING00000007024	-	99	47.467	ENSVVUG00000007421	POLR3C	99	46.904	Vulpes_vulpes
ENSCING00000007024	-	100	40.187	ENSXCOG00000019524	polr3c	100	40.187	Xiphophorus_couchianus
ENSCING00000007024	-	100	42.105	ENSXMAG00000016215	polr3c	100	41.742	Xiphophorus_maculatus