EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 11193 bases
Position: chrHT000075.1:362737-373929
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014490	dsrm	PF00035.26	6.2e-12	1	1
ENSCINP00000014490	DND1_DSRM	PF14709.7	2.5e-11	1	1
ENSCINP00000014490	G-patch	PF01585.23	4.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014490	-	2235	-	ENSCINP00000014490	405 (aa)	-	F6ZBX8

Gene Model

Click here to download ENSCING00000007049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007049	-	86	43.164	ENSG00000159140	SON	81	40.214	Homo_sapiens
ENSCING00000007049	-	67	36.364	ENSACIG00000017870	-	94	51.000	Amphilophus_citrinellus
ENSCING00000007049	-	81	37.265	ENSATEG00000012732	-	56	38.070	Anabas_testudineus
ENSCING00000007049	-	95	42.787	ENSAPLG00000008908	-	88	42.892	Anas_platyrhynchos
ENSCING00000007049	-	82	39.058	ENSACAG00000004681	-	78	39.058	Anolis_carolinensis
ENSCING00000007049	-	85	40.000	ENSANAG00000035426	SON	81	40.751	Aotus_nancymaae
ENSCING00000007049	-	70	37.037	ENSACLG00000007098	-	79	37.037	Astatotilapia_calliptera
ENSCING00000007049	-	86	43.784	ENSCJAG00000046975	SON	81	40.751	Callithrix_jacchus
ENSCING00000007049	-	86	43.164	ENSCAFG00020025305	SON	81	40.751	Canis_lupus_dingo
ENSCING00000007049	-	85	39.946	ENSTSYG00000008371	SON	81	41.287	Carlito_syrichta
ENSCING00000007049	-	86	43.164	ENSCPOG00000024278	SON	81	40.751	Cavia_porcellus
ENSCING00000007049	-	85	40.000	ENSCCAG00000030234	SON	81	40.751	Cebus_capucinus
ENSCING00000007049	-	85	40.000	ENSCATG00000029812	SON	81	40.751	Cercocebus_atys
ENSCING00000007049	-	86	43.164	ENSCLAG00000011776	SON	81	40.751	Chinchilla_lanigera
ENSCING00000007049	-	85	40.000	ENSCANG00000025986	SON	81	40.751	Colobus_angolensis_palliatus
ENSCING00000007049	-	86	43.784	ENSCGRG00001016220	Son	81	40.751	Cricetulus_griseus_chok1gshd
ENSCING00000007049	-	86	43.784	ENSCGRG00000015260	Son	86	40.751	Cricetulus_griseus_crigri
ENSCING00000007049	-	85	40.000	ENSDORG00000028617	-	81	40.751	Dipodomys_ordii
ENSCING00000007049	-	81	35.450	ENSELUG00000003878	-	68	41.322	Esox_lucius
ENSCING00000007049	-	85	39.410	ENSFCAG00000028680	-	81	40.751	Felis_catus
ENSCING00000007049	-	86	43.869	ENSFALG00000002365	-	94	42.092	Ficedula_albicollis
ENSCING00000007049	-	86	43.164	ENSFDAG00000019128	SON	81	40.751	Fukomys_damarensis
ENSCING00000007049	-	86	43.597	ENSGALG00000052354	-	81	41.689	Gallus_gallus
ENSCING00000007049	-	85	40.000	ENSGGOG00000010481	SON	81	40.751	Gorilla_gorilla
ENSCING00000007049	-	86	43.164	ENSHGLG00000010432	SON	81	40.751	Heterocephalus_glaber_female
ENSCING00000007049	-	86	43.164	ENSSTOG00000020593	SON	81	40.751	Ictidomys_tridecemlineatus
ENSCING00000007049	-	85	40.267	ENSJJAG00000013491	-	81	40.751	Jaculus_jaculus
ENSCING00000007049	-	82	44.818	ENSLACG00000013385	-	80	43.216	Latimeria_chalumnae
ENSCING00000007049	-	82	41.011	ENSLOCG00000011021	-	75	40.194	Lepisosteus_oculatus
ENSCING00000007049	-	85	40.000	ENSMFAG00000034427	SON	81	40.751	Macaca_fascicularis
ENSCING00000007049	-	86	43.164	ENSMMUG00000005511	SON	81	40.751	Macaca_mulatta
ENSCING00000007049	-	85	40.000	ENSMNEG00000031671	SON	81	40.751	Macaca_nemestrina
ENSCING00000007049	-	85	40.000	ENSMLEG00000035039	SON	81	40.751	Mandrillus_leucophaeus
ENSCING00000007049	-	86	43.280	ENSMGAG00000014526	-	94	42.067	Meleagris_gallopavo
ENSCING00000007049	-	85	40.267	ENSMAUG00000002086	-	81	40.751	Mesocricetus_auratus
ENSCING00000007049	-	85	39.410	ENSMICG00000033920	SON	81	40.751	Microcebus_murinus
ENSCING00000007049	-	85	40.267	ENSMOCG00000012860	-	81	40.751	Microtus_ochrogaster
ENSCING00000007049	-	81	38.235	ENSMALG00000006263	-	94	36.667	Monopterus_albus
ENSCING00000007049	-	86	43.164	MGP_CAROLIEiJ_G0020965	Son	81	41.600	Mus_caroli
ENSCING00000007049	-	86	43.784	ENSMUSG00000022961	Son	81	41.600	Mus_musculus
ENSCING00000007049	-	86	43.784	MGP_PahariEiJ_G0016670	Son	81	41.600	Mus_pahari
ENSCING00000007049	-	86	43.784	MGP_SPRETEiJ_G0021871	Son	81	41.600	Mus_spretus
ENSCING00000007049	-	85	40.533	ENSNGAG00000000062	-	81	41.867	Nannospalax_galili
ENSCING00000007049	-	85	40.000	ENSNLEG00000004002	SON	81	40.751	Nomascus_leucogenys
ENSCING00000007049	-	85	40.000	ENSODEG00000003658	-	81	40.751	Octodon_degus
ENSCING00000007049	-	81	39.420	ENSONIG00000003775	-	77	38.107	Oreochromis_niloticus
ENSCING00000007049	-	82	33.908	ENSORLG00020014016	-	83	33.908	Oryzias_latipes_hni
ENSCING00000007049	-	81	36.842	ENSORLG00015016415	-	65	37.719	Oryzias_latipes_hsok
ENSCING00000007049	-	85	40.000	ENSPPAG00000033712	SON	81	40.751	Pan_paniscus
ENSCING00000007049	-	85	39.410	ENSPPRG00000019353	SON	81	40.751	Panthera_pardus
ENSCING00000007049	-	85	39.410	ENSPTIG00000017100	SON	81	40.751	Panthera_tigris_altaica
ENSCING00000007049	-	85	40.000	ENSPTRG00000013872	SON	81	40.751	Pan_troglodytes
ENSCING00000007049	-	85	40.000	ENSPTRG00000052356	-	93	58.559	Pan_troglodytes
ENSCING00000007049	-	85	40.000	ENSPANG00000024077	SON	81	40.751	Papio_anubis
ENSCING00000007049	-	87	42.973	ENSPSIG00000008097	-	85	41.707	Pelodiscus_sinensis
ENSCING00000007049	-	86	38.830	ENSPMGG00000015598	-	80	40.115	Periophthalmus_magnuspinnatus
ENSCING00000007049	-	85	39.410	ENSPCIG00000012884	-	81	40.751	Phascolarctos_cinereus
ENSCING00000007049	-	85	39.410	ENSPCOG00000015502	SON	81	40.751	Propithecus_coquereli
ENSCING00000007049	-	85	40.000	ENSRBIG00000044269	-	93	58.559	Rhinopithecus_bieti
ENSCING00000007049	-	85	40.000	ENSRROG00000042156	SON	81	40.751	Rhinopithecus_roxellana
ENSCING00000007049	-	85	40.000	ENSSBOG00000020885	SON	81	40.751	Saimiri_boliviensis_boliviensis
ENSCING00000007049	-	86	38.606	ENSSHAG00000008266	SON	70	38.095	Sarcophilus_harrisii
ENSCING00000007049	-	84	42.618	ENSTGUG00000000486	-	85	41.133	Taeniopygia_guttata
ENSCING00000007049	-	78	37.685	ENSTNIG00000014468	-	82	37.467	Tetraodon_nigroviridis
ENSCING00000007049	-	88	39.535	ENSXETG00000014115	son	93	39.663	Xenopus_tropicalis