EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007069 (Gene tree)
Gene ID: 100187258
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1212 bases
Position: chr7:2867386-2868597
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014512	PolyA_pol	PF01743.20	2.3e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014512	-	1212	-	ENSCINP00000014512	404 (aa)	-	F6WW70

Gene Model

Click here to download ENSCING00000007069's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007069	-	99	44.444	ENSG00000072756	TRNT1	93	44.444	Homo_sapiens
ENSCING00000007069	-	99	39.851	ENSAPOG00000013687	trnt1	94	39.851	Acanthochromis_polyacanthus
ENSCING00000007069	-	100	43.614	ENSAMEG00000014520	TRNT1	93	43.614	Ailuropoda_melanoleuca
ENSCING00000007069	-	99	40.247	ENSACIG00000021706	trnt1	95	40.247	Amphilophus_citrinellus
ENSCING00000007069	-	99	39.753	ENSAOCG00000024612	trnt1	94	39.753	Amphiprion_ocellaris
ENSCING00000007069	-	96	34.872	ENSAPEG00000022627	trnt1	90	34.872	Amphiprion_percula
ENSCING00000007069	-	99	40.494	ENSATEG00000008928	trnt1	99	40.494	Anabas_testudineus
ENSCING00000007069	-	94	45.431	ENSAPLG00000004258	TRNT1	95	45.431	Anas_platyrhynchos
ENSCING00000007069	-	99	41.363	ENSACAG00000005657	TRNT1	92	41.363	Anolis_carolinensis
ENSCING00000007069	-	100	44.310	ENSANAG00000024802	TRNT1	93	44.310	Aotus_nancymaae
ENSCING00000007069	-	99	40.741	ENSACLG00000022227	trnt1	94	40.741	Astatotilapia_calliptera
ENSCING00000007069	-	100	43.382	ENSAMXG00000003960	trnt1	94	43.382	Astyanax_mexicanus
ENSCING00000007069	-	100	44.310	ENSBTAG00000019534	TRNT1	93	44.310	Bos_taurus
ENSCING00000007069	-	99	41.320	WBGene00010089	hpo-31	93	41.320	Caenorhabditis_elegans
ENSCING00000007069	-	100	43.826	ENSCJAG00000015466	TRNT1	93	43.826	Callithrix_jacchus
ENSCING00000007069	-	100	43.826	ENSCAFG00000005985	TRNT1	93	43.826	Canis_familiaris
ENSCING00000007069	-	100	43.826	ENSCAFG00020014746	TRNT1	93	43.826	Canis_lupus_dingo
ENSCING00000007069	-	99	44.526	ENSCHIG00000007030	TRNT1	92	44.526	Capra_hircus
ENSCING00000007069	-	99	44.039	ENSTSYG00000013390	TRNT1	93	44.039	Carlito_syrichta
ENSCING00000007069	-	93	37.143	ENSCAPG00000006891	TRNT1	99	37.143	Cavia_aperea
ENSCING00000007069	-	99	44.769	ENSCPOG00000007849	TRNT1	78	60.000	Cavia_porcellus
ENSCING00000007069	-	99	44.039	ENSCCAG00000002919	TRNT1	99	43.489	Cebus_capucinus
ENSCING00000007069	-	99	44.444	ENSCATG00000031985	TRNT1	92	44.444	Cercocebus_atys
ENSCING00000007069	-	99	45.255	ENSCLAG00000005186	TRNT1	81	63.218	Chinchilla_lanigera
ENSCING00000007069	-	99	44.938	ENSCSAG00000011052	TRNT1	93	44.938	Chlorocebus_sabaeus
ENSCING00000007069	-	84	60.116	ENSCHOG00000005712	TRNT1	78	60.116	Choloepus_hoffmanni
ENSCING00000007069	-	99	45.658	ENSCPBG00000017636	TRNT1	91	45.658	Chrysemys_picta_bellii
ENSCING00000007069	-	99	70.471	ENSCSAVG00000007494	-	95	70.471	Ciona_savignyi
ENSCING00000007069	-	99	44.691	ENSCANG00000039030	TRNT1	93	44.691	Colobus_angolensis_palliatus
ENSCING00000007069	-	99	44.526	ENSCGRG00001009998	Trnt1	93	44.526	Cricetulus_griseus_chok1gshd
ENSCING00000007069	-	99	44.526	ENSCGRG00000013410	Trnt1	84	62.011	Cricetulus_griseus_crigri
ENSCING00000007069	-	99	41.728	ENSCSEG00000008157	trnt1	95	41.728	Cynoglossus_semilaevis
ENSCING00000007069	-	99	40.247	ENSCVAG00000019770	trnt1	95	40.247	Cyprinodon_variegatus
ENSCING00000007069	-	100	42.015	ENSDARG00000075297	trnt1	94	42.015	Danio_rerio
ENSCING00000007069	-	100	44.310	ENSDNOG00000008837	TRNT1	93	44.310	Dasypus_novemcinctus
ENSCING00000007069	-	99	44.691	ENSDORG00000014035	Trnt1	93	44.691	Dipodomys_ordii
ENSCING00000007069	-	99	40.000	FBgn0037369	CG2100	84	40.000	Drosophila_melanogaster
ENSCING00000007069	-	57	55.652	ENSETEG00000018177	TRNT1	92	55.652	Echinops_telfairi
ENSCING00000007069	-	99	44.140	ENSEBUG00000012779	-	94	44.140	Eptatretus_burgeri
ENSCING00000007069	-	99	43.552	ENSEASG00005003577	TRNT1	93	43.552	Equus_asinus_asinus
ENSCING00000007069	-	99	43.796	ENSECAG00000014420	TRNT1	93	43.796	Equus_caballus
ENSCING00000007069	-	100	43.489	ENSEEUG00000009567	TRNT1	93	43.489	Erinaceus_europaeus
ENSCING00000007069	-	99	41.895	ENSELUG00000003802	trnt1	93	41.895	Esox_lucius
ENSCING00000007069	-	100	43.584	ENSFCAG00000026805	TRNT1	93	43.584	Felis_catus
ENSCING00000007069	-	94	46.736	ENSFALG00000013539	TRNT1	99	46.736	Ficedula_albicollis
ENSCING00000007069	-	99	45.255	ENSFDAG00000018412	TRNT1	81	62.069	Fukomys_damarensis
ENSCING00000007069	-	99	40.000	ENSFHEG00000019294	trnt1	95	40.000	Fundulus_heteroclitus
ENSCING00000007069	-	99	43.317	ENSGMOG00000007460	trnt1	94	43.317	Gadus_morhua
ENSCING00000007069	-	99	45.050	ENSGALG00000017368	TRNT1	93	45.050	Gallus_gallus
ENSCING00000007069	-	99	40.494	ENSGAFG00000008647	trnt1	95	40.494	Gambusia_affinis
ENSCING00000007069	-	99	41.278	ENSGACG00000011903	trnt1	96	42.228	Gasterosteus_aculeatus
ENSCING00000007069	-	99	45.455	ENSGAGG00000020942	TRNT1	92	45.455	Gopherus_agassizii
ENSCING00000007069	-	99	44.444	ENSGGOG00000015286	TRNT1	93	44.444	Gorilla_gorilla
ENSCING00000007069	-	99	40.741	ENSHBUG00000002797	trnt1	94	40.741	Haplochromis_burtoni
ENSCING00000007069	-	99	44.526	ENSHGLG00000003649	TRNT1	93	44.526	Heterocephalus_glaber_female
ENSCING00000007069	-	98	42.611	ENSHGLG00000000221	-	92	42.611	Heterocephalus_glaber_female
ENSCING00000007069	-	99	44.282	ENSHGLG00100016421	TRNT1	80	60.116	Heterocephalus_glaber_male
ENSCING00000007069	-	99	40.000	ENSHCOG00000010618	trnt1	95	40.000	Hippocampus_comes
ENSCING00000007069	-	100	41.912	ENSIPUG00000000971	trnt1	94	41.912	Ictalurus_punctatus
ENSCING00000007069	-	100	45.320	ENSSTOG00000000150	TRNT1	84	62.069	Ictidomys_tridecemlineatus
ENSCING00000007069	-	99	44.039	ENSJJAG00000018561	Trnt1	93	44.039	Jaculus_jaculus
ENSCING00000007069	-	99	40.648	ENSKMAG00000011307	trnt1	94	40.648	Kryptolebias_marmoratus
ENSCING00000007069	-	96	38.205	ENSLBEG00000019457	trnt1	91	38.205	Labrus_bergylta
ENSCING00000007069	-	99	44.554	ENSLACG00000013227	TRNT1	93	44.554	Latimeria_chalumnae
ENSCING00000007069	-	99	42.786	ENSLOCG00000011105	trnt1	92	42.786	Lepisosteus_oculatus
ENSCING00000007069	-	100	44.794	ENSLAFG00000023191	TRNT1	93	44.794	Loxodonta_africana
ENSCING00000007069	-	99	44.691	ENSMFAG00000045113	TRNT1	92	44.691	Macaca_fascicularis
ENSCING00000007069	-	99	44.691	ENSMMUG00000017983	TRNT1	92	44.691	Macaca_mulatta
ENSCING00000007069	-	99	44.691	ENSMNEG00000037805	TRNT1	92	44.691	Macaca_nemestrina
ENSCING00000007069	-	94	44.531	ENSMLEG00000033671	TRNT1	99	44.531	Mandrillus_leucophaeus
ENSCING00000007069	-	99	40.494	ENSMAMG00000023401	trnt1	94	40.494	Mastacembelus_armatus
ENSCING00000007069	-	99	40.741	ENSMZEG00005009141	trnt1	94	40.741	Maylandia_zebra
ENSCING00000007069	-	79	41.875	ENSMGAG00000009971	TRNT1	99	41.875	Meleagris_gallopavo
ENSCING00000007069	-	99	44.526	ENSMAUG00000020707	Trnt1	93	44.526	Mesocricetus_auratus
ENSCING00000007069	-	100	44.068	ENSMICG00000016615	TRNT1	93	44.068	Microcebus_murinus
ENSCING00000007069	-	99	44.039	ENSMOCG00000004539	Trnt1	93	44.039	Microtus_ochrogaster
ENSCING00000007069	-	99	40.741	ENSMMOG00000010742	trnt1	95	40.741	Mola_mola
ENSCING00000007069	-	99	45.012	ENSMODG00000004368	TRNT1	93	45.012	Monodelphis_domestica
ENSCING00000007069	-	99	40.741	ENSMALG00000008376	trnt1	94	40.741	Monopterus_albus
ENSCING00000007069	-	99	44.282	MGP_CAROLIEiJ_G0028698	Trnt1	81	62.644	Mus_caroli
ENSCING00000007069	-	99	44.526	ENSMUSG00000013736	Trnt1	81	62.644	Mus_musculus
ENSCING00000007069	-	99	44.444	MGP_PahariEiJ_G0022449	Trnt1	86	63.218	Mus_pahari
ENSCING00000007069	-	99	44.526	MGP_SPRETEiJ_G0029726	Trnt1	81	62.644	Mus_spretus
ENSCING00000007069	-	100	43.584	ENSMPUG00000017017	TRNT1	93	43.584	Mustela_putorius_furo
ENSCING00000007069	-	95	44.819	ENSMLUG00000011864	TRNT1	99	44.819	Myotis_lucifugus
ENSCING00000007069	-	99	45.499	ENSNGAG00000000537	Trnt1	80	62.857	Nannospalax_galili
ENSCING00000007069	-	79	43.344	ENSNBRG00000023606	trnt1	93	43.344	Neolamprologus_brichardi
ENSCING00000007069	-	99	44.691	ENSNLEG00000003226	TRNT1	93	44.691	Nomascus_leucogenys
ENSCING00000007069	-	99	44.444	ENSMEUG00000004684	TRNT1	93	44.444	Notamacropus_eugenii
ENSCING00000007069	-	94	41.667	ENSOPRG00000015067	TRNT1	99	41.667	Ochotona_princeps
ENSCING00000007069	-	99	45.255	ENSODEG00000007597	TRNT1	93	45.255	Octodon_degus
ENSCING00000007069	-	99	40.898	ENSONIG00000020273	trnt1	92	40.898	Oreochromis_niloticus
ENSCING00000007069	-	99	45.388	ENSOANG00000007514	TRNT1	93	45.388	Ornithorhynchus_anatinus
ENSCING00000007069	-	99	45.050	ENSOCUG00000008580	TRNT1	93	45.050	Oryctolagus_cuniculus
ENSCING00000007069	-	99	40.494	ENSORLG00000003165	trnt1	95	40.494	Oryzias_latipes
ENSCING00000007069	-	99	41.235	ENSORLG00020022060	trnt1	95	41.235	Oryzias_latipes_hni
ENSCING00000007069	-	99	40.988	ENSORLG00015018915	trnt1	95	40.988	Oryzias_latipes_hsok
ENSCING00000007069	-	99	40.247	ENSOMEG00000003331	trnt1	95	40.247	Oryzias_melastigma
ENSCING00000007069	-	99	44.526	ENSOARG00000008631	TRNT1	92	44.526	Ovis_aries
ENSCING00000007069	-	99	44.691	ENSPPAG00000043566	TRNT1	93	44.691	Pan_paniscus
ENSCING00000007069	-	99	44.444	ENSPPRG00000001327	TRNT1	92	44.444	Panthera_pardus
ENSCING00000007069	-	100	44.226	ENSPTIG00000011448	TRNT1	93	44.226	Panthera_tigris_altaica
ENSCING00000007069	-	99	44.444	ENSPTRG00000014564	TRNT1	93	44.444	Pan_troglodytes
ENSCING00000007069	-	99	44.444	ENSPANG00000025944	TRNT1	92	44.444	Papio_anubis
ENSCING00000007069	-	100	42.506	ENSPKIG00000020015	trnt1	94	42.506	Paramormyrops_kingsleyae
ENSCING00000007069	-	97	44.836	ENSPSIG00000017356	TRNT1	99	44.836	Pelodiscus_sinensis
ENSCING00000007069	-	99	42.118	ENSPMGG00000008888	trnt1	93	42.118	Periophthalmus_magnuspinnatus
ENSCING00000007069	-	99	44.769	ENSPEMG00000019845	Trnt1	93	44.769	Peromyscus_maniculatus_bairdii
ENSCING00000007069	-	99	44.444	ENSPCIG00000030436	TRNT1	93	44.444	Phascolarctos_cinereus
ENSCING00000007069	-	99	40.741	ENSPFOG00000006194	trnt1	94	40.741	Poecilia_formosa
ENSCING00000007069	-	99	40.741	ENSPLAG00000015623	trnt1	99	40.741	Poecilia_latipinna
ENSCING00000007069	-	99	40.741	ENSPMEG00000012216	trnt1	99	40.741	Poecilia_mexicana
ENSCING00000007069	-	99	40.741	ENSPREG00000021470	trnt1	95	40.741	Poecilia_reticulata
ENSCING00000007069	-	99	44.282	ENSPPYG00000013702	TRNT1	93	44.282	Pongo_abelii
ENSCING00000007069	-	94	44.359	ENSPCAG00000001951	TRNT1	99	44.359	Procavia_capensis
ENSCING00000007069	-	100	43.826	ENSPCOG00000022228	TRNT1	93	43.826	Propithecus_coquereli
ENSCING00000007069	-	94	43.959	ENSPVAG00000008784	TRNT1	99	43.959	Pteropus_vampyrus
ENSCING00000007069	-	99	40.741	ENSPNYG00000003120	trnt1	94	40.741	Pundamilia_nyererei
ENSCING00000007069	-	100	41.667	ENSPNAG00000000565	trnt1	94	41.667	Pygocentrus_nattereri
ENSCING00000007069	-	99	44.282	ENSRNOG00000006432	Trnt1	93	44.282	Rattus_norvegicus
ENSCING00000007069	-	99	43.704	ENSRBIG00000042632	TRNT1	93	43.704	Rhinopithecus_bieti
ENSCING00000007069	-	99	44.444	ENSRROG00000036866	TRNT1	93	44.444	Rhinopithecus_roxellana
ENSCING00000007069	-	99	44.282	ENSSBOG00000021208	TRNT1	93	44.282	Saimiri_boliviensis_boliviensis
ENSCING00000007069	-	99	44.526	ENSSHAG00000018861	TRNT1	93	44.526	Sarcophilus_harrisii
ENSCING00000007069	-	99	42.079	ENSSFOG00015020844	trnt1	93	42.079	Scleropages_formosus
ENSCING00000007069	-	99	41.728	ENSSMAG00000015432	trnt1	92	41.728	Scophthalmus_maximus
ENSCING00000007069	-	99	41.728	ENSSDUG00000012320	trnt1	95	41.728	Seriola_dumerili
ENSCING00000007069	-	99	41.481	ENSSLDG00000009325	trnt1	95	41.481	Seriola_lalandi_dorsalis
ENSCING00000007069	-	61	39.683	ENSSLDG00000016463	-	91	40.586	Seriola_lalandi_dorsalis
ENSCING00000007069	-	94	44.271	ENSSPUG00000014153	TRNT1	99	44.271	Sphenodon_punctatus
ENSCING00000007069	-	99	40.898	ENSSPAG00000021005	trnt1	93	40.898	Stegastes_partitus
ENSCING00000007069	-	100	43.980	ENSSSCG00000011529	TRNT1	93	43.980	Sus_scrofa
ENSCING00000007069	-	99	47.030	ENSTGUG00000010192	TRNT1	99	47.030	Taeniopygia_guttata
ENSCING00000007069	-	99	41.626	ENSTRUG00000001088	trnt1	95	41.626	Takifugu_rubripes
ENSCING00000007069	-	100	42.260	ENSTNIG00000007363	trnt1	93	42.260	Tetraodon_nigroviridis
ENSCING00000007069	-	57	43.913	ENSTBEG00000006367	TRNT1	76	43.913	Tupaia_belangeri
ENSCING00000007069	-	100	43.826	ENSTTRG00000007803	TRNT1	93	43.826	Tursiops_truncatus
ENSCING00000007069	-	100	43.735	ENSUAMG00000022574	TRNT1	93	43.735	Ursus_americanus
ENSCING00000007069	-	100	43.980	ENSUMAG00000024092	TRNT1	93	43.980	Ursus_maritimus
ENSCING00000007069	-	100	43.826	ENSVVUG00000012810	TRNT1	93	43.826	Vulpes_vulpes
ENSCING00000007069	-	99	43.596	ENSXETG00000025091	trnt1	95	44.909	Xenopus_tropicalis
ENSCING00000007069	-	99	40.247	ENSXCOG00000010150	trnt1	95	40.247	Xiphophorus_couchianus
ENSCING00000007069	-	99	40.247	ENSXMAG00000002227	trnt1	95	40.247	Xiphophorus_maculatus