EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007181 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4602 bases
Position: chrHT000174.1:406498-411099
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014730	RRM_1	PF00076.22	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014730	-	770	-	ENSCINP00000014730	249 (aa)	-	F6ZAE1

Gene Model

Click here to download ENSCING00000007181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007181	-	86	46.512	ENSACLG00000010457	eif4h	85	43.612	Astatotilapia_calliptera
ENSCING00000007181	-	88	48.165	ENSCCAG00000034098	EIF4H	87	46.818	Cebus_capucinus
ENSCING00000007181	-	87	48.148	ENSCSEG00000016175	eif4h	51	59.829	Cynoglossus_semilaevis
ENSCING00000007181	-	86	48.624	ENSCVAG00000021728	eif4h	89	46.930	Cyprinodon_variegatus
ENSCING00000007181	-	86	43.860	ENSDARG00000042252	eif4h	87	47.345	Danio_rerio
ENSCING00000007181	-	88	45.228	ENSEBUG00000003401	eif4h	89	46.610	Eptatretus_burgeri
ENSCING00000007181	-	89	46.396	ENSEASG00005015880	EIF4H	89	43.860	Equus_asinus_asinus
ENSCING00000007181	-	95	45.763	ENSECAG00000017832	EIF4H	89	43.860	Equus_caballus
ENSCING00000007181	-	90	47.391	ENSELUG00000017026	eif4h	87	49.554	Esox_lucius
ENSCING00000007181	-	88	44.954	ENSFDAG00000008915	-	88	36.667	Fukomys_damarensis
ENSCING00000007181	-	88	46.862	ENSGMOG00000009571	eif4h	95	44.635	Gadus_morhua
ENSCING00000007181	-	89	46.018	ENSGALG00000001313	EIF4H	89	46.875	Gallus_gallus
ENSCING00000007181	-	88	48.035	ENSGAFG00000018555	eif4h	87	42.795	Gambusia_affinis
ENSCING00000007181	-	86	47.907	ENSGACG00000004504	eif4h	87	43.590	Gasterosteus_aculeatus
ENSCING00000007181	-	88	46.809	ENSHBUG00000016482	eif4h	87	43.750	Haplochromis_burtoni
ENSCING00000007181	-	86	40.654	ENSHGLG00000006693	-	88	34.956	Heterocephalus_glaber_female
ENSCING00000007181	-	86	40.654	ENSHGLG00100013834	-	88	34.956	Heterocephalus_glaber_male
ENSCING00000007181	-	85	45.852	ENSHCOG00000006653	eif4h	87	46.330	Hippocampus_comes
ENSCING00000007181	-	86	47.706	ENSIPUG00000020402	eif4h	88	44.492	Ictalurus_punctatus
ENSCING00000007181	-	88	46.725	ENSKMAG00000001866	eif4h	88	45.763	Kryptolebias_marmoratus
ENSCING00000007181	-	91	44.309	ENSMMUG00000006205	EIF4H	85	43.182	Macaca_mulatta
ENSCING00000007181	-	86	47.162	ENSMZEG00005022684	eif4h	87	43.933	Maylandia_zebra
ENSCING00000007181	-	88	45.306	ENSMALG00000000803	eif4h	86	47.598	Monopterus_albus
ENSCING00000007181	-	88	45.701	ENSODEG00000008163	-	85	37.344	Octodon_degus
ENSCING00000007181	-	89	47.863	ENSPKIG00000015513	eif4h	98	44.569	Paramormyrops_kingsleyae
ENSCING00000007181	-	89	46.983	ENSPKIG00000011080	eif4h	87	46.696	Paramormyrops_kingsleyae
ENSCING00000007181	-	89	48.889	ENSPMGG00000020983	eif4h	86	46.352	Periophthalmus_magnuspinnatus
ENSCING00000007181	-	88	47.748	ENSPLAG00000019336	eif4h	89	47.368	Poecilia_latipinna
ENSCING00000007181	-	88	41.224	ENSPMEG00000021959	eif4h	89	48.246	Poecilia_mexicana
ENSCING00000007181	-	88	42.661	ENSPCAG00000013231	EIF4H	52	68.421	Procavia_capensis
ENSCING00000007181	-	86	46.512	ENSPNYG00000009769	eif4h	85	43.612	Pundamilia_nyererei
ENSCING00000007181	-	86	49.083	ENSPNAG00000001813	eif4h	98	44.800	Pygocentrus_nattereri
ENSCING00000007181	-	88	48.624	ENSSFOG00015008101	eif4h	96	42.586	Scleropages_formosus
ENSCING00000007181	-	90	49.776	ENSSMAG00000006068	-	67	48.430	Scophthalmus_maximus
ENSCING00000007181	-	86	48.387	ENSSDUG00000006476	eif4h	88	46.983	Seriola_dumerili
ENSCING00000007181	-	86	47.032	ENSSLDG00000000355	eif4h	86	48.148	Seriola_lalandi_dorsalis
ENSCING00000007181	-	88	50.228	ENSSPAG00000013718	eif4h	87	47.414	Stegastes_partitus
ENSCING00000007181	-	98	49.383	ENSTRUG00000010290	eif4h	98	45.387	Takifugu_rubripes
ENSCING00000007181	-	88	47.598	ENSXMAG00000014333	eif4h	93	47.368	Xiphophorus_maculatus