EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3266 bases
Position: chr7:3621741-3625006
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014738	Rsm22	PF09243.10	2e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014738	-	1368	-	ENSCINP00000014738	456 (aa)	-	F6ZA91

Gene Model

Click here to download ENSCING00000007187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007187	-	94	31.670	ENSAPOG00000007576	mettl17	95	31.670	Acanthochromis_polyacanthus
ENSCING00000007187	-	93	31.860	ENSAMEG00000006615	METTL17	88	31.860	Ailuropoda_melanoleuca
ENSCING00000007187	-	91	31.713	ENSACIG00000012754	mettl17	91	31.713	Amphilophus_citrinellus
ENSCING00000007187	-	94	31.670	ENSAOCG00000007493	mettl17	95	31.670	Amphiprion_ocellaris
ENSCING00000007187	-	94	31.304	ENSAPEG00000020247	mettl17	95	31.304	Amphiprion_percula
ENSCING00000007187	-	90	32.388	ENSATEG00000017426	mettl17	89	32.388	Anabas_testudineus
ENSCING00000007187	-	93	30.115	ENSACAG00000007865	METTL17	83	30.115	Anolis_carolinensis
ENSCING00000007187	-	91	30.806	ENSANAG00000036041	METTL17	88	30.806	Aotus_nancymaae
ENSCING00000007187	-	91	31.294	ENSACLG00000005351	mettl17	91	31.294	Astatotilapia_calliptera
ENSCING00000007187	-	94	31.929	ENSAMXG00000039184	mettl17	92	31.929	Astyanax_mexicanus
ENSCING00000007187	-	64	36.893	ENSAMXG00000043327	-	51	36.223	Astyanax_mexicanus
ENSCING00000007187	-	95	30.926	ENSBTAG00000006613	METTL17	90	30.926	Bos_taurus
ENSCING00000007187	-	91	30.569	ENSCJAG00000009609	METTL17	88	30.569	Callithrix_jacchus
ENSCING00000007187	-	64	34.471	ENSCAFG00000005435	METTL17	93	34.471	Canis_familiaris
ENSCING00000007187	-	95	30.269	ENSCHIG00000010994	METTL17	91	30.269	Capra_hircus
ENSCING00000007187	-	96	30.155	ENSTSYG00000003442	METTL17	92	30.717	Carlito_syrichta
ENSCING00000007187	-	99	30.886	ENSCPOG00000002710	-	96	30.886	Cavia_porcellus
ENSCING00000007187	-	93	30.303	ENSCCAG00000035947	METTL17	88	30.806	Cebus_capucinus
ENSCING00000007187	-	95	30.752	ENSCATG00000040494	METTL17	91	30.752	Cercocebus_atys
ENSCING00000007187	-	91	31.991	ENSCLAG00000000827	METTL17	83	31.991	Chinchilla_lanigera
ENSCING00000007187	-	80	31.903	ENSCSAG00000016646	METTL17	94	31.903	Chlorocebus_sabaeus
ENSCING00000007187	-	74	31.672	ENSCHOG00000008953	METTL17	89	31.672	Choloepus_hoffmanni
ENSCING00000007187	-	88	54.768	ENSCSAVG00000007585	-	99	54.768	Ciona_savignyi
ENSCING00000007187	-	94	30.716	ENSCANG00000037475	METTL17	90	30.716	Colobus_angolensis_palliatus
ENSCING00000007187	-	94	31.567	ENSCGRG00001010750	Mettl17	90	31.567	Cricetulus_griseus_chok1gshd
ENSCING00000007187	-	90	30.918	ENSCGRG00000015526	Mettl17	81	30.918	Cricetulus_griseus_crigri
ENSCING00000007187	-	88	32.692	ENSCSEG00000021339	mettl17	86	32.692	Cynoglossus_semilaevis
ENSCING00000007187	-	91	30.769	ENSCVAG00000005357	mettl17	89	30.769	Cyprinodon_variegatus
ENSCING00000007187	-	91	32.634	ENSDARG00000103889	mettl17	88	37.879	Danio_rerio
ENSCING00000007187	-	93	30.858	ENSDNOG00000019964	METTL17	89	30.858	Dasypus_novemcinctus
ENSCING00000007187	-	94	31.507	ENSDORG00000008161	Mettl17	90	31.507	Dipodomys_ordii
ENSCING00000007187	-	67	32.154	FBgn0032168	CG13126	64	32.154	Drosophila_melanogaster
ENSCING00000007187	-	56	35.156	ENSETEG00000019263	METTL17	57	35.156	Echinops_telfairi
ENSCING00000007187	-	82	30.628	ENSEBUG00000009009	mettl17	95	30.628	Eptatretus_burgeri
ENSCING00000007187	-	89	30.993	ENSEASG00005010223	METTL17	84	30.993	Equus_asinus_asinus
ENSCING00000007187	-	91	31.655	ENSEEUG00000002506	METTL17	84	31.655	Erinaceus_europaeus
ENSCING00000007187	-	91	31.422	ENSELUG00000003981	mettl17	90	31.422	Esox_lucius
ENSCING00000007187	-	96	31.081	ENSFCAG00000014881	METTL17	92	31.081	Felis_catus
ENSCING00000007187	-	99	31.317	ENSFDAG00000010537	METTL17	96	31.317	Fukomys_damarensis
ENSCING00000007187	-	88	32.847	ENSGMOG00000010872	mettl17	95	32.847	Gadus_morhua
ENSCING00000007187	-	91	31.034	ENSGAFG00000021000	mettl17	89	31.034	Gambusia_affinis
ENSCING00000007187	-	88	31.068	ENSGACG00000017799	mettl17	94	31.068	Gasterosteus_aculeatus
ENSCING00000007187	-	99	30.670	ENSHGLG00000002249	METTL17	96	30.670	Heterocephalus_glaber_female
ENSCING00000007187	-	99	30.886	ENSHGLG00100000467	METTL17	96	30.886	Heterocephalus_glaber_male
ENSCING00000007187	-	91	30.275	ENSHCOG00000012231	mettl17	88	30.275	Hippocampus_comes
ENSCING00000007187	-	88	31.566	ENSIPUG00000015340	mettl17	88	31.566	Ictalurus_punctatus
ENSCING00000007187	-	92	31.455	ENSSTOG00000003819	METTL17	82	31.455	Ictidomys_tridecemlineatus
ENSCING00000007187	-	94	31.567	ENSJJAG00000001662	Mettl17	95	31.567	Jaculus_jaculus
ENSCING00000007187	-	91	31.323	ENSKMAG00000017924	mettl17	90	31.323	Kryptolebias_marmoratus
ENSCING00000007187	-	88	33.094	ENSLBEG00000004908	mettl17	88	33.094	Labrus_bergylta
ENSCING00000007187	-	66	34.641	ENSLACG00000005995	METTL17	81	34.641	Latimeria_chalumnae
ENSCING00000007187	-	92	30.751	ENSLAFG00000007078	METTL17	88	31.043	Loxodonta_africana
ENSCING00000007187	-	93	30.858	ENSMFAG00000043736	METTL17	89	30.858	Macaca_fascicularis
ENSCING00000007187	-	93	30.858	ENSMMUG00000003157	METTL17	89	30.858	Macaca_mulatta
ENSCING00000007187	-	93	30.858	ENSMNEG00000040221	METTL17	89	30.858	Macaca_nemestrina
ENSCING00000007187	-	95	30.752	ENSMLEG00000040753	METTL17	91	30.752	Mandrillus_leucophaeus
ENSCING00000007187	-	91	33.021	ENSMAMG00000008290	mettl17	94	33.021	Mastacembelus_armatus
ENSCING00000007187	-	91	31.221	ENSMZEG00005024236	mettl17	91	31.221	Maylandia_zebra
ENSCING00000007187	-	90	32.304	ENSMAUG00000008709	Mettl17	84	32.304	Mesocricetus_auratus
ENSCING00000007187	-	94	30.876	ENSMICG00000013660	METTL17	90	30.876	Microcebus_murinus
ENSCING00000007187	-	94	31.797	ENSMOCG00000016682	Mettl17	91	31.797	Microtus_ochrogaster
ENSCING00000007187	-	91	32.075	ENSMMOG00000019559	mettl17	93	32.075	Mola_mola
ENSCING00000007187	-	92	30.824	ENSMODG00000006851	METTL17	84	30.824	Monodelphis_domestica
ENSCING00000007187	-	91	31.148	ENSMALG00000014127	mettl17	90	31.148	Monopterus_albus
ENSCING00000007187	-	99	31.522	MGP_CAROLIEiJ_G0019226	Mettl17	95	31.522	Mus_caroli
ENSCING00000007187	-	99	31.957	ENSMUSG00000004561	Mettl17	95	31.957	Mus_musculus
ENSCING00000007187	-	99	31.739	MGP_PahariEiJ_G0030247	Mettl17	96	31.957	Mus_pahari
ENSCING00000007187	-	99	31.304	MGP_SPRETEiJ_G0020117	Mettl17	95	31.304	Mus_spretus
ENSCING00000007187	-	95	30.290	ENSMLUG00000014583	METTL17	90	30.290	Myotis_lucifugus
ENSCING00000007187	-	93	32.184	ENSNGAG00000021270	Mettl17	88	32.326	Nannospalax_galili
ENSCING00000007187	-	91	32.488	ENSNBRG00000015857	mettl17	91	33.173	Neolamprologus_brichardi
ENSCING00000007187	-	87	30.846	ENSMEUG00000008336	METTL17	80	30.846	Notamacropus_eugenii
ENSCING00000007187	-	94	31.034	ENSODEG00000000134	METTL17	87	31.034	Octodon_degus
ENSCING00000007187	-	91	30.986	ENSONIG00000015190	mettl17	90	30.986	Oreochromis_niloticus
ENSCING00000007187	-	95	30.892	ENSOCUG00000007094	METTL17	90	31.279	Oryctolagus_cuniculus
ENSCING00000007187	-	88	33.019	ENSORLG00000003002	mettl17	87	33.019	Oryzias_latipes
ENSCING00000007187	-	91	32.644	ENSORLG00015009853	mettl17	90	32.644	Oryzias_latipes_hsok
ENSCING00000007187	-	88	33.333	ENSOMEG00000000790	mettl17	88	33.333	Oryzias_melastigma
ENSCING00000007187	-	95	30.926	ENSOARG00000019714	METTL17	90	30.926	Ovis_aries
ENSCING00000007187	-	99	31.155	ENSPPRG00000010711	METTL17	94	31.155	Panthera_pardus
ENSCING00000007187	-	99	31.155	ENSPTIG00000007288	METTL17	94	31.155	Panthera_tigris_altaica
ENSCING00000007187	-	95	30.752	ENSPANG00000021109	METTL17	91	30.752	Papio_anubis
ENSCING00000007187	-	88	31.643	ENSPKIG00000008054	mettl17	85	31.643	Paramormyrops_kingsleyae
ENSCING00000007187	-	94	32.118	ENSPEMG00000022743	Mettl17	90	32.118	Peromyscus_maniculatus_bairdii
ENSCING00000007187	-	80	32.973	ENSPMAG00000008258	mettl17	93	32.973	Petromyzon_marinus
ENSCING00000007187	-	94	30.115	ENSPCIG00000028751	METTL17	90	30.115	Phascolarctos_cinereus
ENSCING00000007187	-	91	31.106	ENSPFOG00000003796	mettl17	90	30.952	Poecilia_formosa
ENSCING00000007187	-	91	32.028	ENSPLAG00000006941	mettl17	89	32.028	Poecilia_latipinna
ENSCING00000007187	-	91	31.567	ENSPMEG00000023219	mettl17	89	31.567	Poecilia_mexicana
ENSCING00000007187	-	91	30.631	ENSPREG00000001337	mettl17	90	30.631	Poecilia_reticulata
ENSCING00000007187	-	95	30.345	ENSPPYG00000005582	METTL17	91	30.345	Pongo_abelii
ENSCING00000007187	-	62	31.469	ENSPCAG00000013867	METTL17	87	31.469	Procavia_capensis
ENSCING00000007187	-	94	31.106	ENSPCOG00000024629	METTL17	90	31.106	Propithecus_coquereli
ENSCING00000007187	-	91	30.569	ENSPVAG00000001607	METTL17	84	30.569	Pteropus_vampyrus
ENSCING00000007187	-	91	31.294	ENSPNYG00000003273	mettl17	91	31.294	Pundamilia_nyererei
ENSCING00000007187	-	88	30.969	ENSPNAG00000011683	mettl17	87	30.969	Pygocentrus_nattereri
ENSCING00000007187	-	99	32.391	ENSRNOG00000025512	Mettl17	95	32.391	Rattus_norvegicus
ENSCING00000007187	-	95	30.734	ENSRBIG00000031488	METTL17	91	30.734	Rhinopithecus_bieti
ENSCING00000007187	-	95	30.734	ENSRROG00000035824	METTL17	91	30.734	Rhinopithecus_roxellana
ENSCING00000007187	-	67	33.550	ENSSBOG00000020679	METTL17	80	33.550	Saimiri_boliviensis_boliviensis
ENSCING00000007187	-	91	31.043	ENSSHAG00000005786	METTL17	87	31.043	Sarcophilus_harrisii
ENSCING00000007187	-	91	31.469	ENSSMAG00000010421	mettl17	89	31.469	Scophthalmus_maximus
ENSCING00000007187	-	91	32.710	ENSSDUG00000006365	mettl17	90	32.710	Seriola_dumerili
ENSCING00000007187	-	91	32.710	ENSSLDG00000007792	mettl17	90	32.710	Seriola_lalandi_dorsalis
ENSCING00000007187	-	93	30.115	ENSSPUG00000008423	METTL17	94	30.115	Sphenodon_punctatus
ENSCING00000007187	-	92	31.651	ENSSPAG00000012400	mettl17	90	31.651	Stegastes_partitus
ENSCING00000007187	-	87	32.446	ENSTRUG00000024326	mettl17	92	32.446	Takifugu_rubripes
ENSCING00000007187	-	89	30.244	ENSTBEG00000015144	METTL17	84	30.072	Tupaia_belangeri
ENSCING00000007187	-	91	30.260	ENSTTRG00000004213	METTL17	83	30.260	Tursiops_truncatus
ENSCING00000007187	-	95	31.818	ENSUAMG00000011141	METTL17	94	32.168	Ursus_americanus
ENSCING00000007187	-	95	31.818	ENSUMAG00000003450	METTL17	91	31.818	Ursus_maritimus
ENSCING00000007187	-	92	30.118	ENSVVUG00000009081	METTL17	87	30.986	Vulpes_vulpes
ENSCING00000007187	-	96	30.580	ENSXETG00000001747	mettl17	94	30.580	Xenopus_tropicalis
ENSCING00000007187	-	91	31.034	ENSXMAG00000005415	mettl17	88	31.034	Xiphophorus_maculatus