EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000007214 (Gene tree)
Gene ID
100184465
Gene Symbol
-
Alias
-
Full Name
cleavage and polyadenylation specificity factor subunit 3
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
7908 bases
Position
chr2:6680296-6688203
Accession
100184465
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000014805CPSF73-100_CPF11718.86.7e-5011
ENSCINP00000014805Beta-CaspPF10996.85.8e-3311
ENSCINP00000014805Lactamase_BPF00753.273.5e-1911
ENSCINP00000014805RMMBLPF07521.125.1e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000014805-2463XM_002127980ENSCINP00000014805695 (aa)XP_002128016F6W785
Gene Model
Click here to download ENSCING00000007214's gene model file
Pathways
Pathway IDPathway NameSource
cin03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007214's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000007214-9868.129ENSG00000119203CPSF310078.676Homo_sapiens
ENSCING00000007214-7278.313ENSAPOG00000012241CPSF39078.313Acanthochromis_polyacanthus
ENSCING00000007214-9868.375ENSAPOG00000022087cpsf39868.375Acanthochromis_polyacanthus
ENSCING00000007214-9868.029ENSAMEG00000008493CPSF39968.029Ailuropoda_melanoleuca
ENSCING00000007214-8966.560ENSACIG00000009846cpsf39766.560Amphilophus_citrinellus
ENSCING00000007214-9067.559ENSACIG00000023663CPSF39967.559Amphilophus_citrinellus
ENSCING00000007214-9868.082ENSAOCG00000010077CPSF39868.082Amphiprion_ocellaris
ENSCING00000007214-9868.135ENSAOCG00000022056cpsf39472.927Amphiprion_ocellaris
ENSCING00000007214-9868.135ENSAPEG00000019526cpsf39769.266Amphiprion_percula
ENSCING00000007214-9868.082ENSAPEG00000021167CPSF39868.082Amphiprion_percula
ENSCING00000007214-9767.742ENSATEG00000003959cpsf39867.742Anabas_testudineus
ENSCING00000007214-9865.160ENSATEG00000014525CPSF39865.160Anabas_testudineus
ENSCING00000007214-9667.804ENSAPLG00000006941CPSF39867.804Anas_platyrhynchos
ENSCING00000007214-9166.771ENSACAG00000001759CPSF310066.771Anolis_carolinensis
ENSCING00000007214-9864.390ENSANAG00000031254CPSF39965.385Aotus_nancymaae
ENSCING00000007214-8967.732ENSACLG00000018846CPSF39867.732Astatotilapia_calliptera
ENSCING00000007214-9668.161ENSACLG00000014484cpsf39968.161Astatotilapia_calliptera
ENSCING00000007214-9867.686ENSAMXG00000004786cpsf39867.686Astyanax_mexicanus
ENSCING00000007214-9868.029ENSBTAG00000019735CPSF39968.029Bos_taurus
ENSCING00000007214-8958.294WBGene00013460cpsf-38958.294Caenorhabditis_elegans
ENSCING00000007214-9867.883ENSCJAG00000006276CPSF39967.883Callithrix_jacchus
ENSCING00000007214-9867.681ENSCAFG00000003375CPSF39567.681Canis_familiaris
ENSCING00000007214-8871.591ENSCAFG00020026799CPSF39971.591Canis_lupus_dingo
ENSCING00000007214-9868.029ENSCHIG00000013973CPSF39968.029Capra_hircus
ENSCING00000007214-9868.129ENSTSYG00000002967CPSF39968.129Carlito_syrichta
ENSCING00000007214-9668.155ENSCAPG00000013851CPSF39968.155Cavia_aperea
ENSCING00000007214-9867.737ENSCPOG00000011299CPSF39967.737Cavia_porcellus
ENSCING00000007214-9867.883ENSCCAG00000036730CPSF39968.351Cebus_capucinus
ENSCING00000007214-9867.299ENSCATG00000014770CPSF39974.177Cercocebus_atys
ENSCING00000007214-9867.445ENSCLAG00000002727CPSF39967.445Chinchilla_lanigera
ENSCING00000007214-9861.257ENSCSAG00000007125CPSF39961.257Chlorocebus_sabaeus
ENSCING00000007214-7355.842ENSCHOG00000000180CPSF37655.842Choloepus_hoffmanni
ENSCING00000007214-9867.496ENSCPBG00000014074CPSF39867.496Chrysemys_picta_bellii
ENSCING00000007214-9859.302ENSCANG00000034435CPSF39959.302Colobus_angolensis_palliatus
ENSCING00000007214-9867.883ENSCGRG00001013134Cpsf39967.883Cricetulus_griseus_chok1gshd
ENSCING00000007214-9867.883ENSCGRG00000018319Cpsf39967.883Cricetulus_griseus_crigri
ENSCING00000007214-9767.206ENSCSEG00000002021CPSF39967.492Cynoglossus_semilaevis
ENSCING00000007214-9868.175ENSCVAG00000015067CPSF39868.175Cyprinodon_variegatus
ENSCING00000007214-9867.638ENSDARG00000027649cpsf39867.638Danio_rerio
ENSCING00000007214-9866.425ENSDNOG00000008940CPSF39566.425Dasypus_novemcinctus
ENSCING00000007214-9469.632ENSDORG00000014263Cpsf39969.632Dipodomys_ordii
ENSCING00000007214-9761.743FBgn0261065Cpsf739861.743Drosophila_melanogaster
ENSCING00000007214-9458.679ENSETEG00000003893CPSF39958.679Echinops_telfairi
ENSCING00000007214-9963.636ENSEBUG00000009018cpsf39963.636Eptatretus_burgeri
ENSCING00000007214-9868.029ENSEASG00005003970CPSF39968.029Equus_asinus_asinus
ENSCING00000007214-9868.029ENSECAG00000019911CPSF39673.142Equus_caballus
ENSCING00000007214-9856.642ENSEEUG00000015422CPSF39956.642Erinaceus_europaeus
ENSCING00000007214-9767.544ENSELUG00000013775cpsf39867.544Esox_lucius
ENSCING00000007214-9868.029ENSFCAG00000007852CPSF39968.098Felis_catus
ENSCING00000007214-9368.203ENSFALG00000006572CPSF39968.203Ficedula_albicollis
ENSCING00000007214-9767.398ENSFDAG00000006317CPSF39867.398Fukomys_damarensis
ENSCING00000007214-5849.034ENSFHEG00000012186CPSF39949.034Fundulus_heteroclitus
ENSCING00000007214-9767.941ENSFHEG00000014774cpsf39867.941Fundulus_heteroclitus
ENSCING00000007214-9866.618ENSGMOG00000003157cpsf39866.618Gadus_morhua
ENSCING00000007214-9867.204ENSGALG00000016424CPSF39966.928Gallus_gallus
ENSCING00000007214-9768.182ENSGAFG00000008016CPSF39868.182Gambusia_affinis
ENSCING00000007214-9067.089ENSGAFG00000019449cpsf39967.089Gambusia_affinis
ENSCING00000007214-6863.368ENSGAGG00000025583CPSF39463.368Gopherus_agassizii
ENSCING00000007214-9866.524ENSGGOG00000001757CPSF39477.755Gorilla_gorilla
ENSCING00000007214-5859.413ENSHBUG00000014332CPSF39959.413Haplochromis_burtoni
ENSCING00000007214-9767.742ENSHBUG00000001188cpsf39966.930Haplochromis_burtoni
ENSCING00000007214-9767.302ENSHGLG00000000666CPSF39867.302Heterocephalus_glaber_female
ENSCING00000007214-9767.302ENSHGLG00100007765CPSF39867.302Heterocephalus_glaber_male
ENSCING00000007214-9866.764ENSHCOG00000015957CPSF39866.764Hippocampus_comes
ENSCING00000007214-9868.182ENSHCOG00000007251cpsf39868.182Hippocampus_comes
ENSCING00000007214-9867.007ENSIPUG00000023488cpsf39867.007Ictalurus_punctatus
ENSCING00000007214-9868.175ENSSTOG00000004476CPSF39968.175Ictidomys_tridecemlineatus
ENSCING00000007214-9867.591ENSJJAG00000023415Cpsf39967.591Jaculus_jaculus
ENSCING00000007214-9768.035ENSKMAG00000002806cpsf39868.035Kryptolebias_marmoratus
ENSCING00000007214-9867.350ENSKMAG00000007317CPSF39867.350Kryptolebias_marmoratus
ENSCING00000007214-9469.832ENSLBEG00000013492CPSF39869.832Labrus_bergylta
ENSCING00000007214-5559.424ENSLBEG00000015018-9959.424Labrus_bergylta
ENSCING00000007214-9763.274ENSLBEG00000020569cpsf39463.274Labrus_bergylta
ENSCING00000007214-9863.743ENSLACG00000008308CPSF39863.743Latimeria_chalumnae
ENSCING00000007214-9767.398ENSLOCG00000016823cpsf39867.398Lepisosteus_oculatus
ENSCING00000007214-9668.452ENSLAFG00000009467CPSF39868.452Loxodonta_africana
ENSCING00000007214-9868.129ENSMFAG00000001339CPSF39875.351Macaca_fascicularis
ENSCING00000007214-9368.203ENSMMUG00000018038CPSF39277.244Macaca_mulatta
ENSCING00000007214-8978.715ENSMNEG00000039447CPSF39978.715Macaca_nemestrina
ENSCING00000007214-9868.129ENSMLEG00000026825CPSF39279.266Mandrillus_leucophaeus
ENSCING00000007214-8967.357ENSMAMG00000008835CPSF39867.357Mastacembelus_armatus
ENSCING00000007214-9768.382ENSMAMG00000003076cpsf39868.382Mastacembelus_armatus
ENSCING00000007214-9868.228ENSMZEG00005006258CPSF39868.228Maylandia_zebra
ENSCING00000007214-9767.742ENSMZEG00005014358cpsf39966.930Maylandia_zebra
ENSCING00000007214-9667.761ENSMGAG00000013995CPSF39967.761Meleagris_gallopavo
ENSCING00000007214-5457.480ENSMAUG00000000166Cpsf39957.480Mesocricetus_auratus
ENSCING00000007214-9864.390ENSMICG00000002363CPSF39964.390Microcebus_murinus
ENSCING00000007214-9866.325ENSMOCG00000020067Cpsf39966.325Microtus_ochrogaster
ENSCING00000007214-7858.769ENSMMOG00000011923CPSF38463.571Mola_mola
ENSCING00000007214-9364.915ENSMMOG00000018212CPSF39864.915Mola_mola
ENSCING00000007214-9866.860ENSMODG00000014703CPSF39966.860Monodelphis_domestica
ENSCING00000007214-9164.945ENSMALG00000011474CPSF39964.945Monopterus_albus
ENSCING00000007214-9768.182ENSMALG00000016416cpsf39868.182Monopterus_albus
ENSCING00000007214-9868.029MGP_CAROLIEiJ_G0017640Cpsf39968.029Mus_caroli
ENSCING00000007214-9868.029ENSMUSG00000054309Cpsf39680.508Mus_musculus
ENSCING00000007214-9867.883MGP_PahariEiJ_G0029397Cpsf39967.883Mus_pahari
ENSCING00000007214-9868.029MGP_SPRETEiJ_G0018481Cpsf39968.029Mus_spretus
ENSCING00000007214-9768.129ENSMPUG00000013213CPSF39968.129Mustela_putorius_furo
ENSCING00000007214-9868.076ENSMLUG00000010636CPSF39968.076Myotis_lucifugus
ENSCING00000007214-9867.789ENSNGAG00000019836Cpsf39967.789Nannospalax_galili
ENSCING00000007214-9767.889ENSNBRG00000004770cpsf39967.089Neolamprologus_brichardi
ENSCING00000007214-8967.732ENSNBRG00000010525CPSF39867.732Neolamprologus_brichardi
ENSCING00000007214-9868.129ENSNLEG00000013359CPSF39477.547Nomascus_leucogenys
ENSCING00000007214-8846.992ENSMEUG00000013117-9046.992Notamacropus_eugenii
ENSCING00000007214-9760.234ENSOPRG00000008902CPSF39960.234Ochotona_princeps
ENSCING00000007214-9867.496ENSODEG00000003129CPSF39967.496Octodon_degus
ENSCING00000007214-9768.182ENSONIG00000018812cpsf39868.182Oreochromis_niloticus
ENSCING00000007214-8166.373ENSOANG00000008577CPSF39966.373Ornithorhynchus_anatinus
ENSCING00000007214-9867.883ENSOCUG00000003728CPSF39967.883Oryctolagus_cuniculus
ENSCING00000007214-9867.695ENSORLG00000018854cpsf39867.695Oryzias_latipes
ENSCING00000007214-9867.548ENSORLG00020013331cpsf39867.548Oryzias_latipes_hni
ENSCING00000007214-9867.695ENSORLG00015011017cpsf39867.695Oryzias_latipes_hsok
ENSCING00000007214-9767.647ENSOMEG00000010647cpsf39467.647Oryzias_melastigma
ENSCING00000007214-9860.146ENSOGAG00000001680CPSF39960.146Otolemur_garnettii
ENSCING00000007214-9868.029ENSOARG00000015073CPSF39968.029Ovis_aries
ENSCING00000007214-9868.129ENSPPAG00000042457CPSF39477.547Pan_paniscus
ENSCING00000007214-9867.883ENSPPRG00000016790CPSF39968.098Panthera_pardus
ENSCING00000007214-9867.883ENSPTIG00000003920CPSF39968.029Panthera_tigris_altaica
ENSCING00000007214-9868.129ENSPTRG00000011638CPSF39477.547Pan_troglodytes
ENSCING00000007214-9867.789ENSPANG00000016798CPSF39477.244Papio_anubis
ENSCING00000007214-9867.883ENSPKIG00000023646cpsf39968.049Paramormyrops_kingsleyae
ENSCING00000007214-9867.350ENSPSIG00000016144CPSF39967.350Pelodiscus_sinensis
ENSCING00000007214-5858.637ENSPMGG00000015311CPSF39958.637Periophthalmus_magnuspinnatus
ENSCING00000007214-8269.406ENSPMGG00000006141-9869.406Periophthalmus_magnuspinnatus
ENSCING00000007214-9867.591ENSPEMG00000017668Cpsf39967.737Peromyscus_maniculatus_bairdii
ENSCING00000007214-7676.030ENSPMAG00000004841cpsf39876.030Petromyzon_marinus
ENSCING00000007214-9667.612ENSPCIG00000009823CPSF39868.285Phascolarctos_cinereus
ENSCING00000007214-9767.889ENSPFOG00000010418-9867.889Poecilia_formosa
ENSCING00000007214-9867.695ENSPFOG00000015922cpsf39867.695Poecilia_formosa
ENSCING00000007214-9867.695ENSPLAG00000000882cpsf39867.695Poecilia_latipinna
ENSCING00000007214-5859.314ENSPLAG00000021300-9959.314Poecilia_latipinna
ENSCING00000007214-9867.695ENSPMEG00000018309cpsf39867.695Poecilia_mexicana
ENSCING00000007214-9066.930ENSPREG00000014875cpsf39966.930Poecilia_reticulata
ENSCING00000007214-9765.396ENSPREG00000004482CPSF39865.396Poecilia_reticulata
ENSCING00000007214-9864.035ENSPPYG00000012666CPSF39964.035Pongo_abelii
ENSCING00000007214-7652.741ENSPCAG00000015042CPSF38152.741Procavia_capensis
ENSCING00000007214-8673.022ENSPCOG00000023016CPSF39773.022Propithecus_coquereli
ENSCING00000007214-9768.129ENSPVAG00000005324CPSF39968.129Pteropus_vampyrus
ENSCING00000007214-7773.084ENSPNYG00000021047CPSF38973.084Pundamilia_nyererei
ENSCING00000007214-9767.742ENSPNYG00000004405cpsf39966.930Pundamilia_nyererei
ENSCING00000007214-9867.394ENSPNAG00000023060cpsf39867.394Pygocentrus_nattereri
ENSCING00000007214-9767.982ENSRNOG00000052418Cpsf39967.982Rattus_norvegicus
ENSCING00000007214-9864.672ENSRBIG00000041615CPSF39965.438Rhinopithecus_bieti
ENSCING00000007214-9868.129ENSRROG00000033792CPSF39968.390Rhinopithecus_roxellana
ENSCING00000007214-8443.609YLR277CYSH18543.308Saccharomyces_cerevisiae
ENSCING00000007214-9665.872ENSSBOG00000027263CPSF39765.872Saimiri_boliviensis_boliviensis
ENSCING00000007214-9867.350ENSSHAG00000007024CPSF39967.350Sarcophilus_harrisii
ENSCING00000007214-9767.836ENSSFOG00015002108cpsf39967.606Scleropages_formosus
ENSCING00000007214-9468.913ENSSMAG00000020534CPSF39568.913Scophthalmus_maximus
ENSCING00000007214-9868.029ENSSDUG00000018498CPSF39868.029Seriola_dumerili
ENSCING00000007214-9767.595ENSSDUG00000002828cpsf39667.595Seriola_dumerili
ENSCING00000007214-9767.595ENSSLDG00000008469cpsf39667.595Seriola_lalandi_dorsalis
ENSCING00000007214-9868.029ENSSLDG00000005234CPSF39868.029Seriola_lalandi_dorsalis
ENSCING00000007214-8867.358ENSSARG00000005186CPSF39067.358Sorex_araneus
ENSCING00000007214-9666.914ENSSPUG00000015525CPSF39766.914Sphenodon_punctatus
ENSCING00000007214-9768.035ENSSPAG00000018579cpsf39868.035Stegastes_partitus
ENSCING00000007214-9868.082ENSSPAG00000002906CPSF39967.302Stegastes_partitus
ENSCING00000007214-9868.029ENSSSCG00000020799CPSF39968.029Sus_scrofa
ENSCING00000007214-9868.129ENSTGUG00000013016CPSF39968.129Taeniopygia_guttata
ENSCING00000007214-9766.910ENSTRUG00000007030cpsf39666.910Takifugu_rubripes
ENSCING00000007214-5855.746ENSTRUG00000013905CPSF39955.746Takifugu_rubripes
ENSCING00000007214-6777.008ENSTBEG00000002707CPSF37177.008Tupaia_belangeri
ENSCING00000007214-8659.268ENSTTRG00000000861CPSF38759.268Tursiops_truncatus
ENSCING00000007214-9469.406ENSUAMG00000007535CPSF39469.406Ursus_americanus
ENSCING00000007214-9368.098ENSUMAG00000003676CPSF39473.524Ursus_maritimus
ENSCING00000007214-9268.750ENSVPAG00000008041CPSF310068.750Vicugna_pacos
ENSCING00000007214-9868.029ENSVVUG00000002194CPSF39968.029Vulpes_vulpes
ENSCING00000007214-9768.182ENSXETG00000008263cpsf39868.182Xenopus_tropicalis
ENSCING00000007214-5357.600ENSXCOG00000000957-8757.600Xiphophorus_couchianus
ENSCING00000007214-9867.449ENSXCOG00000019695cpsf39867.449Xiphophorus_couchianus
ENSCING00000007214-9768.182ENSXMAG00000027291CPSF39868.182Xiphophorus_maculatus
ENSCING00000007214-9867.548ENSXMAG00000009784cpsf39967.593Xiphophorus_maculatus

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