EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007255 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: UPF0676 protein C1494.01
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3206 bases
Position: chr8:3880183-3883388
Accession: 100181638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000014881	2OG-FeII_Oxy	PF03171.20	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000014881	-	1337	-	ENSCINP00000014881	328 (aa)	XP_009859341	A0A1W5BDY9

Gene Model

Click here to download ENSCING00000007255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007255	-	84	37.367	ENSAPOG00000011678	si:dkey-10o6.2	90	37.367	Acanthochromis_polyacanthus
ENSCING00000007255	-	86	42.014	ENSACIG00000024115	si:dkey-10o6.2	89	42.014	Amphilophus_citrinellus
ENSCING00000007255	-	99	39.879	ENSACIG00000011675	-	99	39.879	Amphilophus_citrinellus
ENSCING00000007255	-	87	42.123	ENSAOCG00000013068	si:dkey-10o6.2	91	42.123	Amphiprion_ocellaris
ENSCING00000007255	-	86	42.215	ENSAPEG00000011246	si:dkey-10o6.2	91	42.215	Amphiprion_percula
ENSCING00000007255	-	86	42.561	ENSATEG00000000030	si:dkey-10o6.2	91	42.561	Anabas_testudineus
ENSCING00000007255	-	99	38.788	ENSATEG00000021952	si:dkey-10o6.2	99	38.788	Anabas_testudineus
ENSCING00000007255	-	99	40.964	ENSATEG00000021945	si:dkey-10o6.2	99	40.964	Anabas_testudineus
ENSCING00000007255	-	99	38.066	ENSACLG00000023011	si:dkey-10o6.2	99	38.066	Astatotilapia_calliptera
ENSCING00000007255	-	87	40.138	ENSAMXG00000021555	si:dkey-10o6.2	91	40.138	Astyanax_mexicanus
ENSCING00000007255	-	72	38.075	ENSCING00000011926	-	100	38.075	Ciona_intestinalis
ENSCING00000007255	-	87	36.458	ENSCING00000012500	-	88	36.458	Ciona_intestinalis
ENSCING00000007255	-	89	41.356	ENSCING00000016920	-	86	41.356	Ciona_intestinalis
ENSCING00000007255	-	90	43.624	ENSCING00000022311	-	92	43.624	Ciona_intestinalis
ENSCING00000007255	-	87	40.138	ENSCSAVG00000000201	-	88	40.138	Ciona_savignyi
ENSCING00000007255	-	73	39.256	ENSCSAVG00000001337	-	99	39.256	Ciona_savignyi
ENSCING00000007255	-	99	36.970	ENSCSAVG00000004616	-	99	36.970	Ciona_savignyi
ENSCING00000007255	-	54	38.636	ENSCSAVG00000001775	-	99	38.636	Ciona_savignyi
ENSCING00000007255	-	59	76.410	ENSCSAVG00000004871	-	100	76.410	Ciona_savignyi
ENSCING00000007255	-	86	38.542	ENSCSEG00000000927	si:dkey-10o6.2	91	38.542	Cynoglossus_semilaevis
ENSCING00000007255	-	86	40.972	ENSCSEG00000000918	si:dkey-10o6.2	90	40.972	Cynoglossus_semilaevis
ENSCING00000007255	-	86	41.176	ENSCVAG00000015074	si:dkey-10o6.2	91	41.176	Cyprinodon_variegatus
ENSCING00000007255	-	86	42.509	ENSDARG00000074628	si:dkey-10o6.2	80	42.509	Danio_rerio
ENSCING00000007255	-	86	40.767	ENSELUG00000003488	si:dkey-10o6.2	90	40.767	Esox_lucius
ENSCING00000007255	-	86	38.754	ENSFHEG00000019035	si:dkey-10o6.2	91	38.754	Fundulus_heteroclitus
ENSCING00000007255	-	86	40.418	ENSGMOG00000018989	si:dkey-10o6.2	93	40.418	Gadus_morhua
ENSCING00000007255	-	86	40.972	ENSGAFG00000006137	si:dkey-10o6.2	90	40.972	Gambusia_affinis
ENSCING00000007255	-	86	39.203	ENSGACG00000006806	si:dkey-10o6.2	91	39.203	Gasterosteus_aculeatus
ENSCING00000007255	-	99	38.066	ENSHBUG00000008853	si:dkey-10o6.2	99	38.066	Haplochromis_burtoni
ENSCING00000007255	-	86	39.792	ENSHCOG00000017671	-	91	39.792	Hippocampus_comes
ENSCING00000007255	-	86	41.869	ENSHCOG00000017626	si:dkey-10o6.2	91	41.869	Hippocampus_comes
ENSCING00000007255	-	87	40.206	ENSIPUG00000018911	-	91	40.206	Ictalurus_punctatus
ENSCING00000007255	-	87	39.863	ENSIPUG00000018879	si:dkey-10o6.2	82	39.298	Ictalurus_punctatus
ENSCING00000007255	-	99	37.160	ENSKMAG00000006197	si:dkey-10o6.2	99	37.160	Kryptolebias_marmoratus
ENSCING00000007255	-	86	40.972	ENSLBEG00000003839	si:dkey-10o6.2	91	40.972	Labrus_bergylta
ENSCING00000007255	-	99	37.273	ENSLBEG00000003823	si:dkey-10o6.2	90	37.273	Labrus_bergylta
ENSCING00000007255	-	86	43.448	ENSMAMG00000023020	si:dkey-10o6.2	91	43.448	Mastacembelus_armatus
ENSCING00000007255	-	86	43.448	ENSMAMG00000023022	si:dkey-10o6.2	91	43.448	Mastacembelus_armatus
ENSCING00000007255	-	86	43.103	ENSMAMG00000023025	-	91	43.103	Mastacembelus_armatus
ENSCING00000007255	-	86	41.379	ENSMAMG00000023026	-	91	41.379	Mastacembelus_armatus
ENSCING00000007255	-	99	37.764	ENSMZEG00005012018	si:dkey-10o6.2	99	37.764	Maylandia_zebra
ENSCING00000007255	-	86	38.356	ENSMMOG00000020383	si:dkey-10o6.2	89	38.356	Mola_mola
ENSCING00000007255	-	86	39.519	ENSMALG00000011300	si:dkey-10o6.2	91	39.519	Monopterus_albus
ENSCING00000007255	-	99	36.254	ENSNBRG00000015840	si:dkey-10o6.2	99	36.254	Neolamprologus_brichardi
ENSCING00000007255	-	99	39.275	ENSONIG00000015572	si:dkey-10o6.2	99	39.275	Oreochromis_niloticus
ENSCING00000007255	-	86	42.708	ENSORLG00000001314	si:dkey-10o6.2	90	42.708	Oryzias_latipes
ENSCING00000007255	-	86	42.708	ENSORLG00020002660	si:dkey-10o6.2	90	42.708	Oryzias_latipes_hni
ENSCING00000007255	-	86	39.721	ENSOMEG00000003617	si:dkey-10o6.2	88	39.721	Oryzias_melastigma
ENSCING00000007255	-	86	42.105	ENSPKIG00000004206	si:dkey-10o6.2	73	42.105	Paramormyrops_kingsleyae
ENSCING00000007255	-	86	41.958	ENSPKIG00000024109	-	89	41.958	Paramormyrops_kingsleyae
ENSCING00000007255	-	98	38.838	ENSPKIG00000004183	si:dkey-10o6.2	86	38.838	Paramormyrops_kingsleyae
ENSCING00000007255	-	87	35.836	ENSPMGG00000021603	si:dkey-10o6.2	91	36.519	Periophthalmus_magnuspinnatus
ENSCING00000007255	-	99	37.764	ENSPFOG00000017244	si:dkey-10o6.2	97	37.764	Poecilia_formosa
ENSCING00000007255	-	86	40.972	ENSPLAG00000008037	si:dkey-10o6.2	91	40.972	Poecilia_latipinna
ENSCING00000007255	-	73	39.004	ENSPMEG00000020748	si:dkey-10o6.2	96	39.574	Poecilia_mexicana
ENSCING00000007255	-	86	40.070	ENSPREG00000005108	si:dkey-10o6.2	90	40.070	Poecilia_reticulata
ENSCING00000007255	-	99	37.764	ENSPNYG00000010698	si:dkey-10o6.2	99	37.764	Pundamilia_nyererei
ENSCING00000007255	-	71	40.586	ENSPNAG00000014485	-	70	40.586	Pygocentrus_nattereri
ENSCING00000007255	-	99	39.820	ENSPNAG00000014123	si:dkey-10o6.2	98	39.820	Pygocentrus_nattereri
ENSCING00000007255	-	86	41.197	ENSSFOG00015015345	si:dkey-10o6.2	91	41.197	Scleropages_formosus
ENSCING00000007255	-	99	39.275	ENSSMAG00000019016	si:dkey-10o6.2	99	39.275	Scophthalmus_maximus
ENSCING00000007255	-	99	40.361	ENSSDUG00000000943	si:dkey-10o6.2	99	40.361	Seriola_dumerili
ENSCING00000007255	-	99	40.060	ENSSLDG00000003462	si:dkey-10o6.2	99	40.060	Seriola_lalandi_dorsalis
ENSCING00000007255	-	86	42.907	ENSSPAG00000020962	si:dkey-10o6.2	91	42.907	Stegastes_partitus
ENSCING00000007255	-	86	36.332	ENSTRUG00000019532	si:dkey-10o6.2	91	36.332	Takifugu_rubripes
ENSCING00000007255	-	86	38.542	ENSXCOG00000000855	si:dkey-10o6.2	90	38.542	Xiphophorus_couchianus
ENSCING00000007255	-	86	39.583	ENSXMAG00000012432	si:dkey-10o6.2	90	39.583	Xiphophorus_maculatus