EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007310 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6769 bases
Position: chr2:1052205-1058973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015042	PAZ	PF02170.22	3.9e-23	1	1
ENSCINP00000015042	Piwi	PF02171.17	1.1e-110	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015042	-	3494	-	ENSCINP00000015042	862 (aa)	-	F6YK55

Gene Model

Click here to download ENSCING00000007310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007310	-	98	72.353	ENSG00000123908	AGO2	97	72.353	Homo_sapiens
ENSCING00000007310	-	98	71.412	ENSAPOG00000017586	ago2	96	71.412	Acanthochromis_polyacanthus
ENSCING00000007310	-	98	72.183	ENSAMEG00000005019	AGO2	98	72.183	Ailuropoda_melanoleuca
ENSCING00000007310	-	82	73.202	ENSACIG00000001179	ago2	96	73.202	Amphilophus_citrinellus
ENSCING00000007310	-	98	71.529	ENSAOCG00000015307	ago2	96	71.529	Amphiprion_ocellaris
ENSCING00000007310	-	98	71.529	ENSAPEG00000018425	ago2	96	71.529	Amphiprion_percula
ENSCING00000007310	-	98	71.294	ENSATEG00000000529	ago2	96	71.294	Anabas_testudineus
ENSCING00000007310	-	98	72.235	ENSAPLG00000010465	AGO2	99	71.214	Anas_platyrhynchos
ENSCING00000007310	-	98	72.150	ENSACAG00000000167	AGO2	96	72.150	Anolis_carolinensis
ENSCING00000007310	-	98	72.353	ENSANAG00000027399	AGO2	97	72.353	Aotus_nancymaae
ENSCING00000007310	-	81	73.677	ENSACLG00000024684	ago2	98	73.677	Astatotilapia_calliptera
ENSCING00000007310	-	98	71.680	ENSAMXG00000014587	ago2	98	71.680	Astyanax_mexicanus
ENSCING00000007310	-	98	72.426	ENSBTAG00000001579	AGO2	98	72.353	Bos_taurus
ENSCING00000007310	-	98	66.516	WBGene00000105	alg-1	87	66.516	Caenorhabditis_elegans
ENSCING00000007310	-	98	66.551	WBGene00000106	alg-2	96	66.551	Caenorhabditis_elegans
ENSCING00000007310	-	98	72.353	ENSCJAG00000004132	AGO2	98	72.353	Callithrix_jacchus
ENSCING00000007310	-	95	73.002	ENSCAFG00000001196	AGO2	100	73.002	Canis_familiaris
ENSCING00000007310	-	99	71.545	ENSCAFG00020014198	AGO2	98	72.183	Canis_lupus_dingo
ENSCING00000007310	-	98	72.353	ENSCHIG00000010156	AGO2	98	72.353	Capra_hircus
ENSCING00000007310	-	98	72.353	ENSTSYG00000007281	AGO2	97	72.353	Carlito_syrichta
ENSCING00000007310	-	98	60.941	ENSCAPG00000013707	AGO2	97	60.941	Cavia_aperea
ENSCING00000007310	-	98	72.353	ENSCPOG00000010428	AGO2	98	72.353	Cavia_porcellus
ENSCING00000007310	-	98	72.353	ENSCCAG00000035031	AGO2	98	72.353	Cebus_capucinus
ENSCING00000007310	-	98	69.918	ENSCATG00000038820	AGO2	99	69.918	Cercocebus_atys
ENSCING00000007310	-	98	72.353	ENSCLAG00000001381	AGO2	98	72.353	Chinchilla_lanigera
ENSCING00000007310	-	98	72.353	ENSCSAG00000009574	AGO2	93	72.353	Chlorocebus_sabaeus
ENSCING00000007310	-	83	61.991	ENSCHOG00000008938	-	84	61.991	Choloepus_hoffmanni
ENSCING00000007310	-	98	72.268	ENSCPBG00000019183	AGO2	98	71.247	Chrysemys_picta_bellii
ENSCING00000007310	-	98	96.721	ENSCSAVG00000005282	-	99	97.923	Ciona_savignyi
ENSCING00000007310	-	98	69.647	ENSCANG00000030899	AGO2	98	69.647	Colobus_angolensis_palliatus
ENSCING00000007310	-	99	71.628	ENSCGRG00001013557	Ago2	98	71.628	Cricetulus_griseus_chok1gshd
ENSCING00000007310	-	99	71.628	ENSCGRG00000002120	Ago2	99	71.628	Cricetulus_griseus_crigri
ENSCING00000007310	-	98	71.210	ENSCSEG00000012273	ago2	96	72.291	Cynoglossus_semilaevis
ENSCING00000007310	-	98	71.176	ENSCVAG00000008763	ago2	100	70.853	Cyprinodon_variegatus
ENSCING00000007310	-	98	71.445	ENSDARG00000061268	ago2	96	71.445	Danio_rerio
ENSCING00000007310	-	93	71.108	ENSDNOG00000033433	AGO2	100	71.108	Dasypus_novemcinctus
ENSCING00000007310	-	99	71.860	ENSDORG00000011242	Ago2	99	71.860	Dipodomys_ordii
ENSCING00000007310	-	99	69.580	FBgn0262739	AGO1	91	69.580	Drosophila_melanogaster
ENSCING00000007310	-	90	57.101	ENSEBUG00000014681	ago2	98	57.101	Eptatretus_burgeri
ENSCING00000007310	-	81	73.677	ENSEBUG00000008202	-	99	73.677	Eptatretus_burgeri
ENSCING00000007310	-	82	75.106	ENSEBUG00000014654	ago2	100	75.106	Eptatretus_burgeri
ENSCING00000007310	-	95	72.927	ENSEBUG00000011986	-	99	72.927	Eptatretus_burgeri
ENSCING00000007310	-	81	73.677	ENSEBUG00000006807	-	100	73.571	Eptatretus_burgeri
ENSCING00000007310	-	95	73.002	ENSEASG00005021922	AGO2	100	73.002	Equus_asinus_asinus
ENSCING00000007310	-	98	72.471	ENSECAG00000006078	AGO2	97	72.471	Equus_caballus
ENSCING00000007310	-	71	69.355	ENSEEUG00000008564	-	71	69.355	Erinaceus_europaeus
ENSCING00000007310	-	98	71.798	ENSELUG00000019378	ago2	97	71.098	Esox_lucius
ENSCING00000007310	-	98	72.353	ENSFCAG00000002782	AGO2	98	72.353	Felis_catus
ENSCING00000007310	-	98	72.150	ENSFALG00000002838	AGO2	99	71.132	Ficedula_albicollis
ENSCING00000007310	-	98	72.353	ENSFDAG00000004759	AGO2	98	72.353	Fukomys_damarensis
ENSCING00000007310	-	94	72.515	ENSFHEG00000016080	ago2	96	72.515	Fundulus_heteroclitus
ENSCING00000007310	-	98	71.563	ENSGMOG00000013651	ago2	99	70.751	Gadus_morhua
ENSCING00000007310	-	98	72.268	ENSGALG00000040957	AGO2	99	71.247	Gallus_gallus
ENSCING00000007310	-	98	71.412	ENSGAFG00000018026	ago2	96	71.412	Gambusia_affinis
ENSCING00000007310	-	99	70.882	ENSGACG00000006796	ago2	99	70.882	Gasterosteus_aculeatus
ENSCING00000007310	-	98	72.268	ENSGAGG00000003914	AGO2	100	73.241	Gopherus_agassizii
ENSCING00000007310	-	98	72.353	ENSGGOG00000011412	AGO2	98	72.353	Gorilla_gorilla
ENSCING00000007310	-	98	71.765	ENSHBUG00000018515	ago2	98	73.677	Haplochromis_burtoni
ENSCING00000007310	-	98	72.353	ENSHGLG00000005548	AGO2	98	72.353	Heterocephalus_glaber_female
ENSCING00000007310	-	98	72.235	ENSHGLG00100015994	-	98	72.235	Heterocephalus_glaber_male
ENSCING00000007310	-	98	65.294	ENSHGLG00100000694	-	99	64.393	Heterocephalus_glaber_male
ENSCING00000007310	-	98	71.563	ENSHCOG00000006200	ago2	98	71.563	Hippocampus_comes
ENSCING00000007310	-	99	71.047	ENSIPUG00000001018	ago2	99	71.047	Ictalurus_punctatus
ENSCING00000007310	-	98	72.353	ENSSTOG00000008113	AGO2	99	71.611	Ictidomys_tridecemlineatus
ENSCING00000007310	-	98	72.353	ENSJJAG00000018712	Ago2	97	72.353	Jaculus_jaculus
ENSCING00000007310	-	99	70.568	ENSKMAG00000019999	ago2	99	70.568	Kryptolebias_marmoratus
ENSCING00000007310	-	98	71.680	ENSLBEG00000005112	ago2	96	71.680	Labrus_bergylta
ENSCING00000007310	-	99	66.512	ENSLACG00000001277	-	98	66.512	Latimeria_chalumnae
ENSCING00000007310	-	98	71.445	ENSLOCG00000007766	ago2	97	71.445	Lepisosteus_oculatus
ENSCING00000007310	-	98	72.353	ENSLAFG00000012905	AGO2	98	72.353	Loxodonta_africana
ENSCING00000007310	-	98	72.353	ENSMFAG00000015384	AGO2	99	72.320	Macaca_fascicularis
ENSCING00000007310	-	98	72.353	ENSMMUG00000008045	AGO2	97	72.353	Macaca_mulatta
ENSCING00000007310	-	98	72.353	ENSMNEG00000019904	AGO2	98	72.353	Macaca_nemestrina
ENSCING00000007310	-	98	72.353	ENSMLEG00000038874	AGO2	98	72.353	Mandrillus_leucophaeus
ENSCING00000007310	-	98	71.412	ENSMAMG00000008662	ago2	99	69.800	Mastacembelus_armatus
ENSCING00000007310	-	98	71.765	ENSMZEG00005008998	ago2	98	73.677	Maylandia_zebra
ENSCING00000007310	-	98	72.353	ENSMGAG00000012942	AGO2	99	71.329	Meleagris_gallopavo
ENSCING00000007310	-	88	74.661	ENSMAUG00000007785	Ago2	92	74.661	Mesocricetus_auratus
ENSCING00000007310	-	98	72.353	ENSMICG00000004427	AGO2	97	72.353	Microcebus_murinus
ENSCING00000007310	-	99	71.744	ENSMOCG00000000300	Ago2	99	71.744	Microtus_ochrogaster
ENSCING00000007310	-	98	69.095	ENSMMOG00000020165	ago2	99	69.095	Mola_mola
ENSCING00000007310	-	98	72.268	ENSMODG00000000748	AGO2	99	71.412	Monodelphis_domestica
ENSCING00000007310	-	98	71.412	ENSMALG00000020610	ago2	97	71.412	Monopterus_albus
ENSCING00000007310	-	98	72.353	MGP_CAROLIEiJ_G0019861	Ago2	97	72.353	Mus_caroli
ENSCING00000007310	-	98	72.353	ENSMUSG00000036698	Ago2	97	72.353	Mus_musculus
ENSCING00000007310	-	98	72.118	MGP_PahariEiJ_G0019867	Ago2	97	72.118	Mus_pahari
ENSCING00000007310	-	97	72.414	MGP_SPRETEiJ_G0020759	Ago2	97	72.414	Mus_spretus
ENSCING00000007310	-	98	72.353	ENSMPUG00000001930	AGO2	98	72.353	Mustela_putorius_furo
ENSCING00000007310	-	67	65.247	ENSMLUG00000004552	-	100	65.247	Myotis_lucifugus
ENSCING00000007310	-	98	72.353	ENSNGAG00000014556	Ago2	98	72.353	Nannospalax_galili
ENSCING00000007310	-	98	71.765	ENSNBRG00000006100	ago2	96	71.765	Neolamprologus_brichardi
ENSCING00000007310	-	98	68.824	ENSNLEG00000001461	AGO2	98	66.716	Nomascus_leucogenys
ENSCING00000007310	-	80	75.936	ENSMEUG00000001395	AGO2	80	75.936	Notamacropus_eugenii
ENSCING00000007310	-	98	63.059	ENSOPRG00000008795	-	98	63.059	Ochotona_princeps
ENSCING00000007310	-	98	72.353	ENSODEG00000014145	AGO2	98	72.353	Octodon_degus
ENSCING00000007310	-	98	71.765	ENSONIG00000010747	ago2	96	71.765	Oreochromis_niloticus
ENSCING00000007310	-	98	72.353	ENSOANG00000007125	AGO2	97	72.353	Ornithorhynchus_anatinus
ENSCING00000007310	-	98	70.588	ENSOCUG00000006066	AGO2	98	70.588	Oryctolagus_cuniculus
ENSCING00000007310	-	98	71.176	ENSORLG00000004615	ago2	98	71.176	Oryzias_latipes
ENSCING00000007310	-	98	71.176	ENSORLG00020003449	ago2	98	71.176	Oryzias_latipes_hni
ENSCING00000007310	-	98	71.176	ENSORLG00015015319	ago2	98	71.176	Oryzias_latipes_hsok
ENSCING00000007310	-	98	71.176	ENSOMEG00000017751	ago2	97	73.545	Oryzias_melastigma
ENSCING00000007310	-	98	72.353	ENSOGAG00000007933	AGO2	98	72.353	Otolemur_garnettii
ENSCING00000007310	-	98	70.858	ENSOARG00000003763	AGO2	98	70.858	Ovis_aries
ENSCING00000007310	-	98	72.353	ENSPPAG00000037787	AGO2	98	72.353	Pan_paniscus
ENSCING00000007310	-	98	72.353	ENSPPRG00000002594	AGO2	98	72.353	Panthera_pardus
ENSCING00000007310	-	98	71.294	ENSPTIG00000007438	AGO2	97	71.294	Panthera_tigris_altaica
ENSCING00000007310	-	98	72.353	ENSPTRG00000020622	AGO2	97	72.353	Pan_troglodytes
ENSCING00000007310	-	98	70.000	ENSPANG00000005604	AGO2	98	70.000	Papio_anubis
ENSCING00000007310	-	98	71.328	ENSPKIG00000001824	ago2	100	73.181	Paramormyrops_kingsleyae
ENSCING00000007310	-	98	71.176	ENSPSIG00000004064	AGO2	99	70.173	Pelodiscus_sinensis
ENSCING00000007310	-	99	71.744	ENSPEMG00000008137	Ago2	99	71.744	Peromyscus_maniculatus_bairdii
ENSCING00000007310	-	98	72.268	ENSPCIG00000026513	AGO2	99	71.412	Phascolarctos_cinereus
ENSCING00000007310	-	98	71.647	ENSPFOG00000005321	ago2	96	71.647	Poecilia_formosa
ENSCING00000007310	-	98	71.647	ENSPLAG00000007911	ago2	96	71.647	Poecilia_latipinna
ENSCING00000007310	-	98	71.647	ENSPMEG00000007977	ago2	96	71.647	Poecilia_mexicana
ENSCING00000007310	-	98	70.945	ENSPREG00000002072	ago2	97	72.229	Poecilia_reticulata
ENSCING00000007310	-	54	75.373	ENSPPYG00000018908	-	97	75.373	Pongo_abelii
ENSCING00000007310	-	99	67.791	ENSPCAG00000002880	AGO2	99	67.791	Procavia_capensis
ENSCING00000007310	-	98	72.353	ENSPCOG00000023047	AGO2	98	72.353	Propithecus_coquereli
ENSCING00000007310	-	98	59.294	ENSPVAG00000013238	AGO2	97	59.294	Pteropus_vampyrus
ENSCING00000007310	-	98	71.765	ENSPNYG00000019928	ago2	98	73.677	Pundamilia_nyererei
ENSCING00000007310	-	99	71.080	ENSPNAG00000029030	ago2	97	71.080	Pygocentrus_nattereri
ENSCING00000007310	-	98	72.353	ENSRNOG00000008533	Ago2	95	72.353	Rattus_norvegicus
ENSCING00000007310	-	98	72.353	ENSRBIG00000028225	AGO2	98	72.353	Rhinopithecus_bieti
ENSCING00000007310	-	98	72.353	ENSRROG00000003162	AGO2	99	72.320	Rhinopithecus_roxellana
ENSCING00000007310	-	98	72.353	ENSSBOG00000018934	AGO2	98	72.353	Saimiri_boliviensis_boliviensis
ENSCING00000007310	-	98	72.268	ENSSHAG00000009593	AGO2	99	71.412	Sarcophilus_harrisii
ENSCING00000007310	-	98	71.563	ENSSFOG00015012817	ago2	97	71.563	Scleropages_formosus
ENSCING00000007310	-	98	71.529	ENSSMAG00000014089	ago2	97	71.529	Scophthalmus_maximus
ENSCING00000007310	-	98	71.412	ENSSDUG00000005726	ago2	96	71.412	Seriola_dumerili
ENSCING00000007310	-	98	71.412	ENSSLDG00000025582	ago2	99	71.412	Seriola_lalandi_dorsalis
ENSCING00000007310	-	88	60.789	ENSSARG00000007232	-	100	60.789	Sorex_araneus
ENSCING00000007310	-	98	72.118	ENSSPUG00000006608	AGO2	99	71.098	Sphenodon_punctatus
ENSCING00000007310	-	98	71.529	ENSSPAG00000019543	ago2	96	71.529	Stegastes_partitus
ENSCING00000007310	-	98	72.353	ENSSSCG00000005935	AGO2	98	72.353	Sus_scrofa
ENSCING00000007310	-	98	72.118	ENSTGUG00000012652	-	99	71.098	Taeniopygia_guttata
ENSCING00000007310	-	97	68.892	ENSTRUG00000007370	ago2	98	72.668	Takifugu_rubripes
ENSCING00000007310	-	98	71.529	ENSTNIG00000017760	ago2	97	71.529	Tetraodon_nigroviridis
ENSCING00000007310	-	68	74.510	ENSTBEG00000003401	-	84	74.510	Tupaia_belangeri
ENSCING00000007310	-	98	72.353	ENSTTRG00000002872	AGO2	98	72.353	Tursiops_truncatus
ENSCING00000007310	-	98	72.491	ENSUAMG00000010074	AGO2	100	73.058	Ursus_americanus
ENSCING00000007310	-	98	67.647	ENSUMAG00000019572	AGO2	98	67.488	Ursus_maritimus
ENSCING00000007310	-	95	73.002	ENSVVUG00000014692	AGO2	100	73.002	Vulpes_vulpes
ENSCING00000007310	-	98	71.495	ENSXETG00000023755	ago2	97	71.495	Xenopus_tropicalis
ENSCING00000007310	-	98	71.412	ENSXCOG00000000634	ago2	96	71.412	Xiphophorus_couchianus
ENSCING00000007310	-	98	71.412	ENSXMAG00000000787	ago2	96	71.412	Xiphophorus_maculatus