EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007364 (Gene tree)
Gene ID: 100177358
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 13793 bases
Position: chr14:3332878-3346670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015138	Tho2	PF11262.8	5.9e-103	1	1
ENSCINP00000015138	Thoc2	PF11732.8	2.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015138	-	3600	-	ENSCINP00000015138	1190 (aa)	-	F6VCT2

Gene Model

Click here to download ENSCING00000007364's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007364	-	99	58.621	ENSG00000125676	THOC2	75	62.937	Homo_sapiens
ENSCING00000007364	-	99	56.686	ENSAPOG00000003459	thoc2	79	58.977	Acanthochromis_polyacanthus
ENSCING00000007364	-	99	58.173	ENSAMEG00000014841	THOC2	74	58.173	Ailuropoda_melanoleuca
ENSCING00000007364	-	95	56.388	ENSACIG00000015022	thoc2	83	56.388	Amphilophus_citrinellus
ENSCING00000007364	-	99	55.181	ENSAOCG00000013305	thoc2	81	57.081	Amphiprion_ocellaris
ENSCING00000007364	-	99	55.181	ENSAPEG00000004792	thoc2	80	56.994	Amphiprion_percula
ENSCING00000007364	-	99	56.182	ENSATEG00000013110	thoc2	76	56.182	Anabas_testudineus
ENSCING00000007364	-	93	60.573	ENSAPLG00000010614	THOC2	73	60.573	Anas_platyrhynchos
ENSCING00000007364	-	100	57.789	ENSACAG00000011585	THOC2	74	57.789	Anolis_carolinensis
ENSCING00000007364	-	98	57.203	ENSANAG00000034037	-	82	57.669	Aotus_nancymaae
ENSCING00000007364	-	99	57.576	ENSANAG00000022505	-	82	57.576	Aotus_nancymaae
ENSCING00000007364	-	97	56.239	ENSACLG00000012036	thoc2	79	56.239	Astatotilapia_calliptera
ENSCING00000007364	-	99	56.973	ENSAMXG00000014184	thoc2	78	56.766	Astyanax_mexicanus
ENSCING00000007364	-	99	57.837	ENSBTAG00000047341	-	75	57.837	Bos_taurus
ENSCING00000007364	-	99	58.424	ENSBTAG00000008388	THOC2	74	58.424	Bos_taurus
ENSCING00000007364	-	93	35.590	WBGene00015813	thoc-2	78	35.417	Caenorhabditis_elegans
ENSCING00000007364	-	99	58.368	ENSCJAG00000016157	THOC2	82	58.997	Callithrix_jacchus
ENSCING00000007364	-	99	58.424	ENSCAFG00000018574	THOC2	77	58.910	Canis_familiaris
ENSCING00000007364	-	99	58.424	ENSCAFG00020002284	THOC2	76	60.072	Canis_lupus_dingo
ENSCING00000007364	-	99	58.424	ENSCHIG00000017733	-	75	58.424	Capra_hircus
ENSCING00000007364	-	99	57.970	ENSCHIG00000025851	-	76	57.970	Capra_hircus
ENSCING00000007364	-	99	58.340	ENSTSYG00000012292	THOC2	74	58.340	Carlito_syrichta
ENSCING00000007364	-	99	56.915	ENSCPOG00000038670	THOC2	75	56.832	Cavia_porcellus
ENSCING00000007364	-	99	58.452	ENSCCAG00000021906	THOC2	74	58.884	Cebus_capucinus
ENSCING00000007364	-	99	58.537	ENSCATG00000003183	THOC2	74	58.424	Cercocebus_atys
ENSCING00000007364	-	99	58.340	ENSCLAG00000002641	THOC2	74	60.343	Chinchilla_lanigera
ENSCING00000007364	-	99	58.537	ENSCSAG00000018332	THOC2	74	58.424	Chlorocebus_sabaeus
ENSCING00000007364	-	99	58.105	ENSCPBG00000012863	THOC2	94	58.105	Chrysemys_picta_bellii
ENSCING00000007364	-	83	88.800	ENSCSAVG00000007923	-	100	96.277	Ciona_savignyi
ENSCING00000007364	-	99	58.537	ENSCANG00000035077	THOC2	75	57.609	Colobus_angolensis_palliatus
ENSCING00000007364	-	99	58.221	ENSCGRG00001015509	Thoc2	75	58.508	Cricetulus_griseus_chok1gshd
ENSCING00000007364	-	99	57.634	ENSCGRG00001009811	BC005561	74	57.802	Cricetulus_griseus_chok1gshd
ENSCING00000007364	-	97	56.787	ENSCGRG00000001226	Thoc2	74	57.082	Cricetulus_griseus_crigri
ENSCING00000007364	-	99	57.718	ENSCGRG00000000980	BC005561	75	57.886	Cricetulus_griseus_crigri
ENSCING00000007364	-	96	55.091	ENSCSEG00000019946	thoc2	83	55.091	Cynoglossus_semilaevis
ENSCING00000007364	-	99	54.339	ENSCVAG00000021509	thoc2	76	54.254	Cyprinodon_variegatus
ENSCING00000007364	-	99	56.602	ENSDARG00000037503	thoc2	78	56.481	Danio_rerio
ENSCING00000007364	-	99	57.596	ENSDNOG00000012487	THOC2	74	57.596	Dasypus_novemcinctus
ENSCING00000007364	-	99	44.938	FBgn0031390	tho2	73	45.291	Drosophila_melanogaster
ENSCING00000007364	-	93	53.351	ENSETEG00000016183	THOC2	70	63.567	Echinops_telfairi
ENSCING00000007364	-	93	60.072	ENSEASG00005017399	THOC2	73	60.072	Equus_asinus_asinus
ENSCING00000007364	-	99	58.424	ENSECAG00000010431	THOC2	77	58.424	Equus_caballus
ENSCING00000007364	-	72	61.218	ENSEEUG00000015598	THOC2	57	61.218	Erinaceus_europaeus
ENSCING00000007364	-	96	57.844	ENSELUG00000007778	thoc2	79	57.844	Esox_lucius
ENSCING00000007364	-	99	58.424	ENSFCAG00000008301	THOC2	74	58.424	Felis_catus
ENSCING00000007364	-	99	57.730	ENSFALG00000001519	THOC2	75	57.730	Ficedula_albicollis
ENSCING00000007364	-	97	58.970	ENSFDAG00000017237	THOC2	74	60.254	Fukomys_damarensis
ENSCING00000007364	-	96	56.397	ENSFHEG00000001695	thoc2	80	56.397	Fundulus_heteroclitus
ENSCING00000007364	-	99	56.566	ENSGMOG00000000069	thoc2	80	56.481	Gadus_morhua
ENSCING00000007364	-	99	59.091	ENSGALG00000008507	THOC2	79	59.091	Gallus_gallus
ENSCING00000007364	-	97	55.373	ENSGAFG00000005902	thoc2	75	55.286	Gambusia_affinis
ENSCING00000007364	-	99	55.640	ENSGACG00000020367	thoc2	78	55.640	Gasterosteus_aculeatus
ENSCING00000007364	-	97	59.150	ENSGAGG00000024263	THOC2	74	59.150	Gopherus_agassizii
ENSCING00000007364	-	99	58.621	ENSGGOG00000000486	THOC2	74	58.508	Gorilla_gorilla
ENSCING00000007364	-	99	56.793	ENSHBUG00000003516	thoc2	81	56.793	Haplochromis_burtoni
ENSCING00000007364	-	99	58.424	ENSHGLG00000004222	THOC2	75	58.424	Heterocephalus_glaber_female
ENSCING00000007364	-	99	58.592	ENSHGLG00100011595	THOC2	75	58.592	Heterocephalus_glaber_male
ENSCING00000007364	-	97	56.337	ENSHCOG00000006276	thoc2	75	56.337	Hippocampus_comes
ENSCING00000007364	-	99	56.734	ENSIPUG00000015876	thoc2	78	59.533	Ictalurus_punctatus
ENSCING00000007364	-	99	58.256	ENSSTOG00000009134	THOC2	74	58.256	Ictidomys_tridecemlineatus
ENSCING00000007364	-	100	56.917	ENSJJAG00000008784	BC005561	75	56.917	Jaculus_jaculus
ENSCING00000007364	-	100	58.750	ENSJJAG00000017282	Thoc2	75	58.750	Jaculus_jaculus
ENSCING00000007364	-	99	55.321	ENSKMAG00000012263	thoc2	84	56.733	Kryptolebias_marmoratus
ENSCING00000007364	-	99	56.544	ENSLBEG00000003049	thoc2	84	56.544	Labrus_bergylta
ENSCING00000007364	-	99	58.446	ENSLACG00000016494	THOC2	78	58.446	Latimeria_chalumnae
ENSCING00000007364	-	99	58.749	ENSLOCG00000014546	thoc2	75	58.749	Lepisosteus_oculatus
ENSCING00000007364	-	99	58.424	ENSLAFG00000003146	THOC2	74	58.424	Loxodonta_africana
ENSCING00000007364	-	99	58.537	ENSMFAG00000042215	THOC2	74	58.424	Macaca_fascicularis
ENSCING00000007364	-	99	58.537	ENSMMUG00000003745	THOC2	73	60.946	Macaca_mulatta
ENSCING00000007364	-	99	58.537	ENSMNEG00000033627	THOC2	74	58.424	Macaca_nemestrina
ENSCING00000007364	-	99	58.537	ENSMLEG00000034817	THOC2	74	59.083	Mandrillus_leucophaeus
ENSCING00000007364	-	99	55.902	ENSMAMG00000012993	thoc2	81	55.902	Mastacembelus_armatus
ENSCING00000007364	-	99	56.793	ENSMZEG00005015842	thoc2	75	56.793	Maylandia_zebra
ENSCING00000007364	-	97	59.532	ENSMGAG00000007345	THOC2	73	59.532	Meleagris_gallopavo
ENSCING00000007364	-	99	58.789	ENSMAUG00000002356	Thoc2	75	58.676	Mesocricetus_auratus
ENSCING00000007364	-	99	58.459	ENSMICG00000011840	THOC2	75	58.459	Microcebus_murinus
ENSCING00000007364	-	99	57.466	ENSMOCG00000019406	BC005561	75	57.634	Microtus_ochrogaster
ENSCING00000007364	-	99	58.424	ENSMOCG00000009946	Thoc2	74	59.083	Microtus_ochrogaster
ENSCING00000007364	-	99	55.509	ENSMMOG00000016313	thoc2	79	58.512	Mola_mola
ENSCING00000007364	-	99	57.415	ENSMODG00000014984	THOC2	75	57.415	Monodelphis_domestica
ENSCING00000007364	-	99	54.209	ENSMALG00000019718	thoc2	82	54.209	Monopterus_albus
ENSCING00000007364	-	99	57.095	MGP_CAROLIEiJ_G0027482	BC005561	75	57.263	Mus_caroli
ENSCING00000007364	-	99	58.621	MGP_CAROLIEiJ_G0033023	Thoc2	74	58.508	Mus_caroli
ENSCING00000007364	-	99	58.621	ENSMUSG00000037475	Thoc2	74	58.508	Mus_musculus
ENSCING00000007364	-	99	57.095	ENSMUSG00000079065	BC005561	75	57.263	Mus_musculus
ENSCING00000007364	-	99	58.621	MGP_PahariEiJ_G0031569	Thoc2	74	58.508	Mus_pahari
ENSCING00000007364	-	99	57.215	MGP_PahariEiJ_G0017260	BC005561	75	57.383	Mus_pahari
ENSCING00000007364	-	99	58.621	MGP_SPRETEiJ_G0034181	Thoc2	74	58.508	Mus_spretus
ENSCING00000007364	-	99	57.179	MGP_SPRETEiJ_G0028479	BC005561	75	57.347	Mus_spretus
ENSCING00000007364	-	99	58.035	ENSMPUG00000001357	THOC2	75	58.035	Mustela_putorius_furo
ENSCING00000007364	-	89	64.855	ENSMLUG00000027559	-	74	64.855	Myotis_lucifugus
ENSCING00000007364	-	99	55.621	ENSMLUG00000026072	-	81	55.621	Myotis_lucifugus
ENSCING00000007364	-	97	58.768	ENSMLUG00000013656	-	74	58.768	Myotis_lucifugus
ENSCING00000007364	-	99	53.479	ENSMLUG00000028256	-	80	53.479	Myotis_lucifugus
ENSCING00000007364	-	99	58.340	ENSNGAG00000016184	Thoc2	75	58.424	Nannospalax_galili
ENSCING00000007364	-	99	57.683	ENSNGAG00000010936	BC005561	75	57.683	Nannospalax_galili
ENSCING00000007364	-	90	58.960	ENSNBRG00000018089	thoc2	77	58.960	Neolamprologus_brichardi
ENSCING00000007364	-	99	55.574	ENSNLEG00000015055	THOC2	74	55.490	Nomascus_leucogenys
ENSCING00000007364	-	79	67.293	ENSMEUG00000003533	THOC2	65	66.788	Notamacropus_eugenii
ENSCING00000007364	-	99	58.621	ENSODEG00000002478	THOC2	74	58.508	Octodon_degus
ENSCING00000007364	-	99	56.841	ENSONIG00000004348	thoc2	75	56.841	Oreochromis_niloticus
ENSCING00000007364	-	97	59.359	ENSOANG00000004054	THOC2	74	59.359	Ornithorhynchus_anatinus
ENSCING00000007364	-	99	58.340	ENSOCUG00000005996	THOC2	74	58.340	Oryctolagus_cuniculus
ENSCING00000007364	-	99	56.818	ENSORLG00000008692	thoc2	76	56.818	Oryzias_latipes
ENSCING00000007364	-	99	55.640	ENSORLG00020002321	thoc2	78	59.015	Oryzias_latipes_hni
ENSCING00000007364	-	99	55.649	ENSORLG00015000665	thoc2	81	57.306	Oryzias_latipes_hsok
ENSCING00000007364	-	99	56.661	ENSOMEG00000004006	thoc2	75	56.661	Oryzias_melastigma
ENSCING00000007364	-	99	58.424	ENSOGAG00000000302	THOC2	74	58.424	Otolemur_garnettii
ENSCING00000007364	-	97	58.970	ENSOARG00000013665	-	74	58.970	Ovis_aries
ENSCING00000007364	-	71	77.049	ENSOARG00000003614	-	68	77.049	Ovis_aries
ENSCING00000007364	-	99	58.508	ENSPPAG00000040720	THOC2	85	58.508	Pan_paniscus
ENSCING00000007364	-	99	58.508	ENSPPRG00000023137	THOC2	74	58.508	Panthera_pardus
ENSCING00000007364	-	99	58.424	ENSPTIG00000006983	THOC2	74	58.424	Panthera_tigris_altaica
ENSCING00000007364	-	99	58.508	ENSPTRG00000022246	THOC2	78	57.449	Pan_troglodytes
ENSCING00000007364	-	97	57.439	ENSPANG00000004038	THOC2	74	57.339	Papio_anubis
ENSCING00000007364	-	93	59.099	ENSPKIG00000021719	thoc2	76	59.099	Paramormyrops_kingsleyae
ENSCING00000007364	-	99	58.022	ENSPSIG00000015352	THOC2	73	58.022	Pelodiscus_sinensis
ENSCING00000007364	-	99	54.699	ENSPMGG00000002688	thoc2	79	54.699	Periophthalmus_magnuspinnatus
ENSCING00000007364	-	99	58.403	ENSPEMG00000007626	Thoc2	74	58.291	Peromyscus_maniculatus_bairdii
ENSCING00000007364	-	99	57.466	ENSPEMG00000011125	BC005561	75	57.634	Peromyscus_maniculatus_bairdii
ENSCING00000007364	-	99	55.872	ENSPMAG00000007219	-	98	56.338	Petromyzon_marinus
ENSCING00000007364	-	83	57.114	ENSPCIG00000007574	THOC2	99	58.095	Phascolarctos_cinereus
ENSCING00000007364	-	99	55.845	ENSPFOG00000019556	thoc2	76	55.845	Poecilia_formosa
ENSCING00000007364	-	99	54.798	ENSPLAG00000005761	thoc2	75	54.714	Poecilia_latipinna
ENSCING00000007364	-	99	54.798	ENSPMEG00000002951	thoc2	75	54.714	Poecilia_mexicana
ENSCING00000007364	-	99	55.845	ENSPREG00000021746	thoc2	76	55.845	Poecilia_reticulata
ENSCING00000007364	-	99	58.621	ENSPPYG00000020695	THOC2	74	58.508	Pongo_abelii
ENSCING00000007364	-	99	49.790	ENSPCAG00000005402	THOC2	75	49.790	Procavia_capensis
ENSCING00000007364	-	99	57.429	ENSPCOG00000001806	THOC2	74	57.513	Propithecus_coquereli
ENSCING00000007364	-	99	57.670	ENSPVAG00000006132	THOC2	73	60.037	Pteropus_vampyrus
ENSCING00000007364	-	97	57.069	ENSPNYG00000019622	thoc2	79	56.337	Pundamilia_nyererei
ENSCING00000007364	-	99	56.000	ENSPNAG00000020593	thoc2	77	56.000	Pygocentrus_nattereri
ENSCING00000007364	-	99	58.508	ENSRNOG00000007315	Thoc2	74	58.508	Rattus_norvegicus
ENSCING00000007364	-	99	57.550	ENSRNOG00000042340	LOC679894	75	57.718	Rattus_norvegicus
ENSCING00000007364	-	83	59.118	ENSRBIG00000044129	THOC2	79	59.760	Rhinopithecus_bieti
ENSCING00000007364	-	99	58.537	ENSRROG00000041515	THOC2	74	59.083	Rhinopithecus_roxellana
ENSCING00000007364	-	99	58.537	ENSSBOG00000007245	THOC2	74	58.673	Saimiri_boliviensis_boliviensis
ENSCING00000007364	-	98	58.518	ENSSHAG00000015987	THOC2	74	58.518	Sarcophilus_harrisii
ENSCING00000007364	-	99	57.647	ENSSFOG00015004767	THOC2	84	55.778	Scleropages_formosus
ENSCING00000007364	-	99	57.107	ENSSFOG00015010127	thoc2	82	59.005	Scleropages_formosus
ENSCING00000007364	-	99	56.266	ENSSMAG00000016574	thoc2	76	56.266	Scophthalmus_maximus
ENSCING00000007364	-	99	56.266	ENSSDUG00000012815	thoc2	76	56.266	Seriola_dumerili
ENSCING00000007364	-	99	56.350	ENSSLDG00000015816	thoc2	76	56.350	Seriola_lalandi_dorsalis
ENSCING00000007364	-	93	57.782	ENSSARG00000005799	THOC2	69	61.404	Sorex_araneus
ENSCING00000007364	-	99	57.440	ENSSPUG00000012889	THOC2	74	57.606	Sphenodon_punctatus
ENSCING00000007364	-	90	58.566	ENSSPAG00000023593	thoc2	76	58.566	Stegastes_partitus
ENSCING00000007364	-	99	58.424	ENSSSCG00000012639	THOC2	76	58.424	Sus_scrofa
ENSCING00000007364	-	90	61.481	ENSTGUG00000003682	THOC2	73	61.481	Taeniopygia_guttata
ENSCING00000007364	-	99	56.182	ENSTRUG00000015122	thoc2	76	56.182	Takifugu_rubripes
ENSCING00000007364	-	99	55.714	ENSTNIG00000011794	thoc2	78	56.050	Tetraodon_nigroviridis
ENSCING00000007364	-	65	56.667	ENSTBEG00000005854	-	52	56.667	Tupaia_belangeri
ENSCING00000007364	-	78	58.955	ENSTBEG00000004420	-	72	59.018	Tupaia_belangeri
ENSCING00000007364	-	99	55.732	ENSTTRG00000002762	THOC2	68	67.925	Tursiops_truncatus
ENSCING00000007364	-	99	58.424	ENSUAMG00000008780	THOC2	84	60.125	Ursus_americanus
ENSCING00000007364	-	95	56.399	ENSUMAG00000024014	THOC2	81	57.091	Ursus_maritimus
ENSCING00000007364	-	97	58.884	ENSVPAG00000006247	THOC2	73	60.777	Vicugna_pacos
ENSCING00000007364	-	99	58.424	ENSVVUG00000028282	THOC2	85	60.125	Vulpes_vulpes
ENSCING00000007364	-	99	58.002	ENSXETG00000016195	thoc2	98	68.525	Xenopus_tropicalis
ENSCING00000007364	-	97	55.286	ENSXCOG00000006301	thoc2	75	55.199	Xiphophorus_couchianus
ENSCING00000007364	-	99	55.105	ENSXMAG00000011604	thoc2	84	55.105	Xiphophorus_maculatus