EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007375 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1B
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2441 bases
Position: chr8:4297332-4299772
Accession: 100176319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015147	RRM_1	PF00076.22	1.8e-33	1	2
ENSCINP00000015147	RRM_1	PF00076.22	1.8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015147	-	1316	-	ENSCINP00000015147	235 (aa)	XP_002131859	A0A1W2WNG5

Gene Model

Click here to download ENSCING00000007375's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007375	-	71	69.006	ENSACIG00000002623	-	90	71.345	Amphilophus_citrinellus
ENSCING00000007375	-	76	68.421	ENSACLG00000021693	-	76	68.421	Astatotilapia_calliptera
ENSCING00000007375	-	76	72.067	ENSACLG00000005676	-	73	72.778	Astatotilapia_calliptera
ENSCING00000007375	-	75	61.053	WBGene00004700	rsp-3	74	64.211	Caenorhabditis_elegans
ENSCING00000007375	-	54	71.318	ENSCING00000000257	-	75	71.318	Ciona_intestinalis
ENSCING00000007375	-	54	68.504	ENSCSAVG00000003567	-	76	70.079	Ciona_savignyi
ENSCING00000007375	-	79	91.892	ENSCSAVG00000006093	-	95	91.892	Ciona_savignyi
ENSCING00000007375	-	81	59.391	FBgn0283477	SF2	74	61.979	Drosophila_melanogaster
ENSCING00000007375	-	89	65.899	ENSEBUG00000009582	-	78	72.472	Eptatretus_burgeri
ENSCING00000007375	-	76	70.053	ENSFHEG00000017425	-	92	70.690	Fundulus_heteroclitus
ENSCING00000007375	-	71	70.238	ENSGMOG00000010606	-	90	70.833	Gadus_morhua
ENSCING00000007375	-	76	72.222	ENSGAFG00000012721	-	73	72.928	Gambusia_affinis
ENSCING00000007375	-	77	69.110	ENSGAFG00000000609	-	75	71.123	Gambusia_affinis
ENSCING00000007375	-	71	70.238	ENSGACG00000011094	-	90	70.414	Gasterosteus_aculeatus
ENSCING00000007375	-	76	68.783	ENSHBUG00000015576	-	76	68.783	Haplochromis_burtoni
ENSCING00000007375	-	76	67.760	ENSHCOG00000008016	-	73	67.760	Hippocampus_comes
ENSCING00000007375	-	76	71.978	ENSMFAG00000034223	-	61	71.978	Macaca_fascicularis
ENSCING00000007375	-	76	68.617	ENSMZEG00005019071	-	92	69.318	Maylandia_zebra
ENSCING00000007375	-	76	72.067	ENSMZEG00005007947	-	73	72.778	Maylandia_zebra
ENSCING00000007375	-	76	70.330	ENSMMOG00000018849	-	74	71.978	Mola_mola
ENSCING00000007375	-	76	72.067	ENSNBRG00000019981	-	73	72.778	Neolamprologus_brichardi
ENSCING00000007375	-	76	73.184	ENSNBRG00000008134	-	71	74.302	Neolamprologus_brichardi
ENSCING00000007375	-	66	59.740	ENSOPRG00000004745	-	92	59.740	Ochotona_princeps
ENSCING00000007375	-	76	68.063	ENSONIG00000004857	-	75	70.157	Oreochromis_niloticus
ENSCING00000007375	-	50	66.667	ENSOANG00000007320	-	52	82.143	Ornithorhynchus_anatinus
ENSCING00000007375	-	66	46.154	ENSOCUG00000026856	-	89	49.057	Oryctolagus_cuniculus
ENSCING00000007375	-	76	71.038	ENSORLG00000005314	-	71	73.770	Oryzias_latipes
ENSCING00000007375	-	76	71.038	ENSORLG00015015497	-	71	73.770	Oryzias_latipes_hsok
ENSCING00000007375	-	76	70.213	ENSOMEG00000017711	-	71	72.340	Oryzias_melastigma
ENSCING00000007375	-	71	70.833	ENSPLAG00000019613	-	67	71.598	Poecilia_latipinna
ENSCING00000007375	-	79	68.984	ENSPLAG00000019553	-	87	69.942	Poecilia_latipinna
ENSCING00000007375	-	77	69.841	ENSPREG00000016792	-	75	71.892	Poecilia_reticulata
ENSCING00000007375	-	76	68.421	ENSPNYG00000020651	-	73	70.526	Pundamilia_nyererei
ENSCING00000007375	-	76	72.067	ENSPNYG00000017115	-	73	72.778	Pundamilia_nyererei
ENSCING00000007375	-	81	72.021	ENSSFOG00015004989	-	66	72.928	Scleropages_formosus
ENSCING00000007375	-	76	67.513	ENSSDUG00000003887	-	75	68.528	Seriola_dumerili
ENSCING00000007375	-	76	71.508	ENSTRUG00000017058	-	75	72.778	Takifugu_rubripes
ENSCING00000007375	-	76	68.333	ENSTNIG00000009993	-	75	70.718	Tetraodon_nigroviridis
ENSCING00000007375	-	79	68.984	ENSXCOG00000009643	-	75	71.823	Xiphophorus_couchianus
ENSCING00000007375	-	77	73.370	ENSXCOG00000017888	-	78	71.505	Xiphophorus_couchianus
ENSCING00000007375	-	77	69.474	ENSXMAG00000010797	-	75	71.505	Xiphophorus_maculatus