EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007500 (Gene tree)
Gene ID: 100177861
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2518 bases
Position: chr2:1570714-1573231
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015370	GTP_EFTU	PF00009.27	6.9e-46	1	1
ENSCINP00000015370	GTP_EFTU_D2	PF03144.25	2.9e-07	1	1
ENSCINP00000015370	GTP_EFTU_D3	PF03143.17	5.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015370	-	1662	-	ENSCINP00000015370	554 (aa)	-	F6X7X8

Gene Model

Click here to download ENSCING00000007500's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007500	-	95	54.512	WBGene00010405	erfa-3	98	63.415	Caenorhabditis_elegans
ENSCING00000007500	-	83	64.619	FBgn0020443	eRF3	87	68.065	Drosophila_melanogaster
ENSCING00000007500	-	77	56.019	YDR172W	SUP35	63	56.019	Saccharomyces_cerevisiae