EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007544 (Gene tree)
Gene ID: 100175114
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 20254 bases
Position: chrHT000034.1:393036-413289
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000015472	tRNA-synt_1c_C	PF03950.18	4.1e-36	1	1
ENSCINP00000015472	HGTP_anticodon	PF03129.20	4.4e-14	1	1
ENSCINP00000015472	tRNA-synt_1c	PF00749.21	2.4e-107	1	1
ENSCINP00000015472	tRNA-synt_2b	PF00587.25	1.6e-19	1	1
ENSCINP00000015472	ProRS-C_1	PF09180.11	4.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000015472	-	5209	-	ENSCINP00000015472	1596 (aa)	-	F6T8P3

Gene Model

Click here to download ENSCING00000007544's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00860	Porphyrin and chlorophyll metabolism	KEGG
cin00970	Aminoacyl-tRNA biosynthesis	KEGG
cin01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007544	-	94	65.000	ENSG00000136628	EPRS	96	58.918	Homo_sapiens
ENSCING00000007544	-	93	58.941	ENSAPOG00000002084	eprs	96	56.241	Acanthochromis_polyacanthus
ENSCING00000007544	-	97	64.696	ENSAMEG00000009983	EPRS	96	53.284	Ailuropoda_melanoleuca
ENSCING00000007544	-	92	60.000	ENSACIG00000007907	eprs	98	60.058	Amphilophus_citrinellus
ENSCING00000007544	-	93	59.562	ENSAOCG00000023555	eprs	95	59.562	Amphiprion_ocellaris
ENSCING00000007544	-	88	59.270	ENSAPEG00000001630	eprs	96	59.270	Amphiprion_percula
ENSCING00000007544	-	92	60.682	ENSATEG00000006493	eprs	96	60.206	Anabas_testudineus
ENSCING00000007544	-	93	60.606	ENSAPLG00000003240	EPRS	95	56.958	Anas_platyrhynchos
ENSCING00000007544	-	91	61.458	ENSACAG00000001213	EPRS	96	53.799	Anolis_carolinensis
ENSCING00000007544	-	94	65.000	ENSANAG00000022208	EPRS	96	52.366	Aotus_nancymaae
ENSCING00000007544	-	92	61.078	ENSACLG00000020228	eprs	99	61.457	Astatotilapia_calliptera
ENSCING00000007544	-	94	59.187	ENSAMXG00000001984	eprs	96	53.329	Astyanax_mexicanus
ENSCING00000007544	-	98	59.045	ENSBTAG00000006898	EPRS	95	59.045	Bos_taurus
ENSCING00000007544	-	94	65.000	ENSCJAG00000003967	EPRS	96	53.444	Callithrix_jacchus
ENSCING00000007544	-	62	60.606	ENSCAFG00000010873	EPRS	96	54.982	Canis_familiaris
ENSCING00000007544	-	62	60.606	ENSCAFG00020004097	EPRS	96	54.982	Canis_lupus_dingo
ENSCING00000007544	-	92	60.901	ENSCHIG00000021232	EPRS	60	52.973	Capra_hircus
ENSCING00000007544	-	99	53.837	ENSTSYG00000007633	EPRS	96	53.717	Carlito_syrichta
ENSCING00000007544	-	99	53.614	ENSCAPG00000005713	EPRS	91	61.927	Cavia_aperea
ENSCING00000007544	-	99	53.614	ENSCPOG00000003586	EPRS	95	59.021	Cavia_porcellus
ENSCING00000007544	-	89	66.667	ENSCCAG00000028256	EPRS	96	54.012	Cebus_capucinus
ENSCING00000007544	-	81	63.907	ENSCATG00000045050	EPRS	96	63.123	Cercocebus_atys
ENSCING00000007544	-	99	56.540	ENSCLAG00000003851	EPRS	96	56.399	Chinchilla_lanigera
ENSCING00000007544	-	94	66.667	ENSCSAG00000015776	EPRS	96	58.092	Chlorocebus_sabaeus
ENSCING00000007544	-	81	62.931	ENSCHOG00000000140	EPRS	95	63.103	Choloepus_hoffmanni
ENSCING00000007544	-	92	59.910	ENSCPBG00000001138	EPRS	98	69.091	Chrysemys_picta_bellii
ENSCING00000007544	-	93	83.597	ENSCSAVG00000007760	-	97	83.597	Ciona_savignyi
ENSCING00000007544	-	94	66.667	ENSCANG00000022575	EPRS	96	58.237	Colobus_angolensis_palliatus
ENSCING00000007544	-	93	60.549	ENSCGRG00001009885	EPRS	96	60.549	Cricetulus_griseus_chok1gshd
ENSCING00000007544	-	93	60.549	ENSCGRG00000010134	Eprs	97	60.549	Cricetulus_griseus_crigri
ENSCING00000007544	-	99	59.971	ENSCSEG00000010266	eprs	96	57.397	Cynoglossus_semilaevis
ENSCING00000007544	-	91	61.493	ENSCVAG00000005265	eprs	97	53.802	Cyprinodon_variegatus
ENSCING00000007544	-	99	53.855	ENSDARG00000060494	eprs	96	53.800	Danio_rerio
ENSCING00000007544	-	99	58.978	ENSDNOG00000004016	EPRS	96	54.490	Dasypus_novemcinctus
ENSCING00000007544	-	87	75.610	ENSDORG00000004335	Eprs	93	75.610	Dipodomys_ordii
ENSCING00000007544	-	93	55.233	FBgn0005674	GluProRS	98	50.414	Drosophila_melanogaster
ENSCING00000007544	-	78	66.102	ENSETEG00000019858	EPRS	88	58.176	Echinops_telfairi
ENSCING00000007544	-	99	58.772	ENSEASG00005003530	EPRS	96	54.022	Equus_asinus_asinus
ENSCING00000007544	-	99	58.772	ENSECAG00000000700	EPRS	96	54.022	Equus_caballus
ENSCING00000007544	-	50	60.000	ENSEEUG00000001019	EPRS	84	60.000	Erinaceus_europaeus
ENSCING00000007544	-	93	61.912	ENSELUG00000019744	eprs	95	61.912	Esox_lucius
ENSCING00000007544	-	93	61.699	ENSFCAG00000002590	EPRS	96	53.114	Felis_catus
ENSCING00000007544	-	99	52.402	ENSFALG00000012160	EPRS	99	54.038	Ficedula_albicollis
ENSCING00000007544	-	99	58.333	ENSFDAG00000021307	EPRS	97	53.810	Fukomys_damarensis
ENSCING00000007544	-	92	60.411	ENSFHEG00000001390	eprs	96	60.234	Fundulus_heteroclitus
ENSCING00000007544	-	76	71.429	ENSGMOG00000009984	eprs	92	71.429	Gadus_morhua
ENSCING00000007544	-	93	60.435	ENSGALG00000009598	EPRS	96	53.621	Gallus_gallus
ENSCING00000007544	-	91	58.445	ENSGAFG00000000716	eprs	95	57.856	Gambusia_affinis
ENSCING00000007544	-	93	59.184	ENSGACG00000014823	eprs	96	58.892	Gasterosteus_aculeatus
ENSCING00000007544	-	92	60.118	ENSGAGG00000017949	EPRS	96	52.367	Gopherus_agassizii
ENSCING00000007544	-	94	65.000	ENSGGOG00000012404	EPRS	96	58.772	Gorilla_gorilla
ENSCING00000007544	-	92	61.078	ENSHBUG00000019547	eprs	96	61.078	Haplochromis_burtoni
ENSCING00000007544	-	99	56.061	ENSHGLG00000001974	EPRS	96	55.116	Heterocephalus_glaber_female
ENSCING00000007544	-	99	55.041	ENSHGLG00100003853	EPRS	96	55.116	Heterocephalus_glaber_male
ENSCING00000007544	-	91	59.848	ENSHCOG00000001640	eprs	94	72.070	Hippocampus_comes
ENSCING00000007544	-	92	61.310	ENSIPUG00000023784	eprs	94	61.310	Ictalurus_punctatus
ENSCING00000007544	-	99	56.962	ENSSTOG00000011870	EPRS	95	53.772	Ictidomys_tridecemlineatus
ENSCING00000007544	-	94	58.554	ENSJJAG00000022291	Eprs	96	56.695	Jaculus_jaculus
ENSCING00000007544	-	93	61.144	ENSKMAG00000001181	eprs	96	60.940	Kryptolebias_marmoratus
ENSCING00000007544	-	92	60.322	ENSLBEG00000016168	eprs	95	60.029	Labrus_bergylta
ENSCING00000007544	-	84	71.372	ENSLACG00000011773	EPRS	95	60.299	Latimeria_chalumnae
ENSCING00000007544	-	92	60.352	ENSLAFG00000004981	EPRS	95	60.352	Loxodonta_africana
ENSCING00000007544	-	94	66.667	ENSMFAG00000041902	EPRS	96	58.237	Macaca_fascicularis
ENSCING00000007544	-	94	66.667	ENSMMUG00000008722	EPRS	96	58.237	Macaca_mulatta
ENSCING00000007544	-	94	66.667	ENSMNEG00000023887	EPRS	96	58.237	Macaca_nemestrina
ENSCING00000007544	-	89	66.667	ENSMLEG00000032585	EPRS	92	57.692	Mandrillus_leucophaeus
ENSCING00000007544	-	91	61.550	ENSMAMG00000006099	eprs	96	58.192	Mastacembelus_armatus
ENSCING00000007544	-	82	60.000	ENSMZEG00005004950	eprs	94	64.062	Maylandia_zebra
ENSCING00000007544	-	93	60.725	ENSMGAG00000009215	EPRS	95	60.725	Meleagris_gallopavo
ENSCING00000007544	-	93	61.127	ENSMAUG00000012512	Eprs	96	55.313	Mesocricetus_auratus
ENSCING00000007544	-	99	53.737	ENSMICG00000038220	EPRS	96	53.618	Microcebus_murinus
ENSCING00000007544	-	99	56.761	ENSMOCG00000012748	Eprs	96	57.042	Microtus_ochrogaster
ENSCING00000007544	-	92	56.765	ENSMMOG00000015737	eprs	96	56.765	Mola_mola
ENSCING00000007544	-	62	65.152	ENSMODG00000004398	EPRS	62	59.211	Monodelphis_domestica
ENSCING00000007544	-	91	58.296	ENSMALG00000014670	eprs	96	56.812	Monopterus_albus
ENSCING00000007544	-	99	58.382	MGP_CAROLIEiJ_G0015023	Eprs	96	57.803	Mus_caroli
ENSCING00000007544	-	93	60.958	ENSMUSG00000026615	Eprs	96	57.803	Mus_musculus
ENSCING00000007544	-	99	57.803	MGP_PahariEiJ_G0028255	Eprs	96	57.659	Mus_pahari
ENSCING00000007544	-	98	59.091	MGP_SPRETEiJ_G0015823	Eprs	96	57.803	Mus_spretus
ENSCING00000007544	-	56	60.606	ENSMPUG00000004156	EPRS	96	55.638	Mustela_putorius_furo
ENSCING00000007544	-	99	59.205	ENSMLUG00000007253	-	96	58.763	Myotis_lucifugus
ENSCING00000007544	-	99	55.266	ENSNGAG00000009088	Eprs	96	57.062	Nannospalax_galili
ENSCING00000007544	-	93	58.586	ENSNBRG00000006007	eprs	95	60.270	Neolamprologus_brichardi
ENSCING00000007544	-	92	65.000	ENSNLEG00000013988	EPRS	96	59.064	Nomascus_leucogenys
ENSCING00000007544	-	72	70.755	ENSOPRG00000001503	EPRS	76	70.755	Ochotona_princeps
ENSCING00000007544	-	93	59.624	ENSODEG00000014961	EPRS	96	51.640	Octodon_degus
ENSCING00000007544	-	92	60.479	ENSONIG00000003054	eprs	95	60.479	Oreochromis_niloticus
ENSCING00000007544	-	62	59.091	ENSOANG00000001424	-	61	52.632	Ornithorhynchus_anatinus
ENSCING00000007544	-	99	57.143	ENSOCUG00000012039	EPRS	96	52.712	Oryctolagus_cuniculus
ENSCING00000007544	-	91	64.000	ENSORLG00000014819	eprs	96	58.721	Oryzias_latipes
ENSCING00000007544	-	92	59.942	ENSORLG00020018395	eprs	95	58.297	Oryzias_latipes_hni
ENSCING00000007544	-	92	59.854	ENSORLG00015015996	eprs	96	59.178	Oryzias_latipes_hsok
ENSCING00000007544	-	88	59.971	ENSOMEG00000018971	eprs	91	71.624	Oryzias_melastigma
ENSCING00000007544	-	99	53.413	ENSOGAG00000005285	EPRS	98	53.524	Otolemur_garnettii
ENSCING00000007544	-	99	55.335	ENSOARG00000011829	EPRS	96	54.766	Ovis_aries
ENSCING00000007544	-	94	65.000	ENSPPAG00000036757	EPRS	96	58.772	Pan_paniscus
ENSCING00000007544	-	99	58.772	ENSPPRG00000012626	EPRS	96	53.753	Panthera_pardus
ENSCING00000007544	-	99	58.626	ENSPTIG00000012991	EPRS	96	53.632	Panthera_tigris_altaica
ENSCING00000007544	-	94	65.000	ENSPTRG00000001995	EPRS	96	58.772	Pan_troglodytes
ENSCING00000007544	-	94	65.000	ENSPANG00000004476	EPRS	96	58.237	Papio_anubis
ENSCING00000007544	-	99	56.573	ENSPKIG00000023015	eprs	96	60.380	Paramormyrops_kingsleyae
ENSCING00000007544	-	93	60.203	ENSPSIG00000010709	EPRS	97	53.620	Pelodiscus_sinensis
ENSCING00000007544	-	92	62.146	ENSPMGG00000023169	eprs	96	54.781	Periophthalmus_magnuspinnatus
ENSCING00000007544	-	89	60.462	ENSPEMG00000017287	Eprs	95	60.462	Peromyscus_maniculatus_bairdii
ENSCING00000007544	-	99	58.910	ENSPCIG00000009736	EPRS	98	59.031	Phascolarctos_cinereus
ENSCING00000007544	-	99	55.791	ENSPFOG00000017972	eprs	94	56.972	Poecilia_formosa
ENSCING00000007544	-	61	58.794	ENSPMEG00000022964	eprs	99	54.567	Poecilia_mexicana
ENSCING00000007544	-	92	61.128	ENSPREG00000004302	eprs	92	59.971	Poecilia_reticulata
ENSCING00000007544	-	92	63.333	ENSPPYG00000000210	EPRS	95	58.990	Pongo_abelii
ENSCING00000007544	-	82	69.620	ENSPCAG00000015737	EPRS	86	69.620	Procavia_capensis
ENSCING00000007544	-	90	51.326	ENSPCOG00000004103	EPRS	93	51.326	Propithecus_coquereli
ENSCING00000007544	-	93	60.844	ENSPVAG00000013147	EPRS	96	56.596	Pteropus_vampyrus
ENSCING00000007544	-	92	61.078	ENSPNYG00000007931	eprs	96	61.078	Pundamilia_nyererei
ENSCING00000007544	-	91	61.905	ENSPNAG00000003344	eprs	94	74.168	Pygocentrus_nattereri
ENSCING00000007544	-	94	60.000	ENSRNOG00000002393	Eprs	96	60.000	Rattus_norvegicus
ENSCING00000007544	-	88	66.667	ENSRBIG00000034767	EPRS	100	58.382	Rhinopithecus_bieti
ENSCING00000007544	-	94	66.667	ENSRROG00000039885	EPRS	96	58.382	Rhinopithecus_roxellana
ENSCING00000007544	-	98	59.064	ENSSBOG00000029926	EPRS	96	53.837	Saimiri_boliviensis_boliviensis
ENSCING00000007544	-	90	60.606	ENSSHAG00000002391	EPRS	94	58.757	Sarcophilus_harrisii
ENSCING00000007544	-	92	62.519	ENSSFOG00015007233	eprs	93	62.519	Scleropages_formosus
ENSCING00000007544	-	93	60.292	ENSSMAG00000011150	eprs	96	59.913	Scophthalmus_maximus
ENSCING00000007544	-	91	60.266	ENSSDUG00000008910	eprs	96	60.118	Seriola_dumerili
ENSCING00000007544	-	92	60.475	ENSSLDG00000015153	eprs	95	59.613	Seriola_lalandi_dorsalis
ENSCING00000007544	-	88	60.492	ENSSARG00000012244	EPRS	95	54.667	Sorex_araneus
ENSCING00000007544	-	99	51.140	ENSSPUG00000009384	EPRS	94	50.365	Sphenodon_punctatus
ENSCING00000007544	-	92	59.735	ENSSPAG00000010408	eprs	96	53.488	Stegastes_partitus
ENSCING00000007544	-	54	61.538	ENSSSCG00000010821	EPRS	60	52.649	Sus_scrofa
ENSCING00000007544	-	99	53.210	ENSTGUG00000002796	EPRS	97	52.883	Taeniopygia_guttata
ENSCING00000007544	-	91	61.087	ENSTRUG00000006901	eprs	96	61.103	Takifugu_rubripes
ENSCING00000007544	-	54	60.239	ENSTNIG00000011902	eprs	84	60.448	Tetraodon_nigroviridis
ENSCING00000007544	-	92	60.266	ENSTBEG00000008365	EPRS	96	58.272	Tupaia_belangeri
ENSCING00000007544	-	62	52.695	ENSTTRG00000013013	EPRS	61	51.474	Tursiops_truncatus
ENSCING00000007544	-	53	61.045	ENSUAMG00000020817	EPRS	58	61.045	Ursus_americanus
ENSCING00000007544	-	99	60.606	ENSUMAG00000020899	EPRS	98	68.631	Ursus_maritimus
ENSCING00000007544	-	89	57.390	ENSVPAG00000008903	EPRS	92	57.390	Vicugna_pacos
ENSCING00000007544	-	99	58.944	ENSVVUG00000012841	EPRS	74	58.944	Vulpes_vulpes
ENSCING00000007544	-	56	59.770	ENSXETG00000002724	eprs	96	54.126	Xenopus_tropicalis
ENSCING00000007544	-	84	67.523	ENSXCOG00000018038	eprs	95	68.885	Xiphophorus_couchianus
ENSCING00000007544	-	92	61.869	ENSXMAG00000011690	eprs	95	62.239	Xiphophorus_maculatus