EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000007564 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 723 bases
Position: chr1:7936250-7936972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000023355	Sua5_yciO_yrdC	PF01300.18	4.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000023601	-	648	-	ENSCINP00000023355	215 (aa)	-	F7AUU8

Gene Model

Click here to download ENSCING00000007564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000007564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000007564	-	98	48.357	ENSG00000196449	YRDC	73	48.357	Homo_sapiens
ENSCING00000007564	-	98	49.767	ENSAPOG00000024293	yrdc	77	49.767	Acanthochromis_polyacanthus
ENSCING00000007564	-	88	51.042	ENSAMEG00000001173	YRDC	97	51.042	Ailuropoda_melanoleuca
ENSCING00000007564	-	98	49.296	ENSACIG00000017330	yrdc	75	49.296	Amphilophus_citrinellus
ENSCING00000007564	-	98	50.233	ENSAOCG00000021647	yrdc	77	50.233	Amphiprion_ocellaris
ENSCING00000007564	-	98	50.233	ENSAPEG00000006164	yrdc	77	50.233	Amphiprion_percula
ENSCING00000007564	-	99	47.926	ENSATEG00000010086	yrdc	77	47.926	Anabas_testudineus
ENSCING00000007564	-	92	49.254	ENSACAG00000017203	YRDC	92	49.020	Anolis_carolinensis
ENSCING00000007564	-	98	46.512	ENSANAG00000031052	-	75	46.512	Aotus_nancymaae
ENSCING00000007564	-	97	48.585	ENSANAG00000028788	-	86	48.585	Aotus_nancymaae
ENSCING00000007564	-	98	49.048	ENSACLG00000027775	yrdc	75	50.235	Astatotilapia_calliptera
ENSCING00000007564	-	97	49.528	ENSAMXG00000037791	yrdc	76	49.528	Astyanax_mexicanus
ENSCING00000007564	-	98	47.887	ENSBTAG00000006510	YRDC	74	47.887	Bos_taurus
ENSCING00000007564	-	98	38.498	WBGene00012997	Y48C3A.18	95	37.097	Caenorhabditis_elegans
ENSCING00000007564	-	98	48.826	ENSCJAG00000002078	YRDC	56	48.826	Callithrix_jacchus
ENSCING00000007564	-	98	48.357	ENSCAFG00000003253	YRDC	74	48.357	Canis_familiaris
ENSCING00000007564	-	98	48.826	ENSCAFG00020007843	YRDC	74	48.826	Canis_lupus_dingo
ENSCING00000007564	-	98	47.418	ENSCHIG00000007882	YRDC	74	47.418	Capra_hircus
ENSCING00000007564	-	82	48.603	ENSTSYG00000005555	YRDC	61	48.603	Carlito_syrichta
ENSCING00000007564	-	98	45.070	ENSCPOG00000036144	YRDC	73	45.070	Cavia_porcellus
ENSCING00000007564	-	98	48.826	ENSCCAG00000028891	YRDC	73	48.826	Cebus_capucinus
ENSCING00000007564	-	98	48.826	ENSCATG00000036928	YRDC	73	48.826	Cercocebus_atys
ENSCING00000007564	-	92	48.756	ENSCLAG00000015012	YRDC	73	46.479	Chinchilla_lanigera
ENSCING00000007564	-	98	48.826	ENSCSAG00000001116	YRDC	73	48.826	Chlorocebus_sabaeus
ENSCING00000007564	-	66	51.034	ENSCHOG00000005500	YRDC	67	51.034	Choloepus_hoffmanni
ENSCING00000007564	-	98	46.262	ENSCPBG00000018446	YRDC	88	46.262	Chrysemys_picta_bellii
ENSCING00000007564	-	100	86.977	ENSCSAVG00000009982	-	100	86.977	Ciona_savignyi
ENSCING00000007564	-	98	47.887	ENSCANG00000031111	YRDC	73	47.887	Colobus_angolensis_palliatus
ENSCING00000007564	-	98	47.887	ENSCGRG00001014496	-	73	47.887	Cricetulus_griseus_chok1gshd
ENSCING00000007564	-	87	47.120	ENSCGRG00001000829	-	52	47.120	Cricetulus_griseus_chok1gshd
ENSCING00000007564	-	57	49.593	ENSCGRG00000001307	-	93	49.593	Cricetulus_griseus_crigri
ENSCING00000007564	-	98	49.524	ENSCSEG00000019075	yrdc	74	49.524	Cynoglossus_semilaevis
ENSCING00000007564	-	98	50.000	ENSCVAG00000017355	yrdc	76	50.000	Cyprinodon_variegatus
ENSCING00000007564	-	98	46.479	ENSDARG00000041428	yrdc	85	46.479	Danio_rerio
ENSCING00000007564	-	98	47.418	ENSDNOG00000038789	-	73	47.418	Dasypus_novemcinctus
ENSCING00000007564	-	91	37.374	ENSDNOG00000036198	-	93	37.374	Dasypus_novemcinctus
ENSCING00000007564	-	91	51.515	ENSDORG00000008788	Yrdc	84	51.515	Dipodomys_ordii
ENSCING00000007564	-	93	44.279	FBgn0061361	CG33786	78	44.279	Drosophila_melanogaster
ENSCING00000007564	-	98	38.028	ENSETEG00000003442	YRDC	73	38.028	Echinops_telfairi
ENSCING00000007564	-	94	49.515	ENSEBUG00000014080	yrdc	81	49.515	Eptatretus_burgeri
ENSCING00000007564	-	98	48.598	ENSEASG00005012253	YRDC	73	48.598	Equus_asinus_asinus
ENSCING00000007564	-	98	48.598	ENSECAG00000022522	YRDC	73	48.598	Equus_caballus
ENSCING00000007564	-	98	49.765	ENSELUG00000018071	yrdc	66	49.765	Esox_lucius
ENSCING00000007564	-	98	48.826	ENSFCAG00000011018	YRDC	73	48.826	Felis_catus
ENSCING00000007564	-	83	30.890	ENSFALG00000011333	-	51	30.890	Ficedula_albicollis
ENSCING00000007564	-	91	51.515	ENSFALG00000000964	YRDC	88	51.741	Ficedula_albicollis
ENSCING00000007564	-	51	50.459	ENSFDAG00000016507	-	99	50.459	Fukomys_damarensis
ENSCING00000007564	-	98	47.887	ENSFHEG00000001029	yrdc	75	47.179	Fundulus_heteroclitus
ENSCING00000007564	-	98	47.619	ENSGMOG00000015635	yrdc	97	47.619	Gadus_morhua
ENSCING00000007564	-	98	49.296	ENSGALG00000029001	YRDC	80	49.296	Gallus_gallus
ENSCING00000007564	-	82	30.108	ENSGALG00000025899	-	63	30.108	Gallus_gallus
ENSCING00000007564	-	98	49.296	ENSGAFG00000008396	yrdc	75	49.296	Gambusia_affinis
ENSCING00000007564	-	98	48.837	ENSGACG00000013878	yrdc	84	48.837	Gasterosteus_aculeatus
ENSCING00000007564	-	98	48.131	ENSGAGG00000014968	YRDC	89	48.131	Gopherus_agassizii
ENSCING00000007564	-	98	48.357	ENSGGOG00000007619	YRDC	73	48.357	Gorilla_gorilla
ENSCING00000007564	-	98	49.048	ENSHBUG00000009298	yrdc	75	50.235	Haplochromis_burtoni
ENSCING00000007564	-	98	46.479	ENSHGLG00000014075	YRDC	73	46.479	Heterocephalus_glaber_female
ENSCING00000007564	-	97	46.698	ENSHGLG00100002734	YRDC	73	46.698	Heterocephalus_glaber_male
ENSCING00000007564	-	93	49.254	ENSHCOG00000006598	yrdc	76	49.254	Hippocampus_comes
ENSCING00000007564	-	98	47.887	ENSIPUG00000014985	yrdc	83	47.887	Ictalurus_punctatus
ENSCING00000007564	-	98	48.826	ENSSTOG00000001643	YRDC	73	48.826	Ictidomys_tridecemlineatus
ENSCING00000007564	-	51	50.459	ENSJJAG00000023117	-	99	50.459	Jaculus_jaculus
ENSCING00000007564	-	98	48.826	ENSKMAG00000013468	yrdc	75	48.826	Kryptolebias_marmoratus
ENSCING00000007564	-	98	50.235	ENSLBEG00000027501	yrdc	75	50.235	Labrus_bergylta
ENSCING00000007564	-	83	32.086	ENSLACG00000017624	si:ch211-153b23.3	58	32.086	Latimeria_chalumnae
ENSCING00000007564	-	99	46.759	ENSLACG00000010689	YRDC	95	46.759	Latimeria_chalumnae
ENSCING00000007564	-	99	48.148	ENSLOCG00000003321	yrdc	85	48.148	Lepisosteus_oculatus
ENSCING00000007564	-	98	48.357	ENSLAFG00000017556	YRDC	73	48.357	Loxodonta_africana
ENSCING00000007564	-	98	48.826	ENSMFAG00000003487	YRDC	96	48.826	Macaca_fascicularis
ENSCING00000007564	-	98	48.826	ENSMMUG00000005372	YRDC	54	48.826	Macaca_mulatta
ENSCING00000007564	-	98	48.826	ENSMNEG00000029348	YRDC	73	48.826	Macaca_nemestrina
ENSCING00000007564	-	71	51.974	ENSMLEG00000041122	YRDC	95	51.974	Mandrillus_leucophaeus
ENSCING00000007564	-	99	48.848	ENSMAMG00000007315	yrdc	76	48.848	Mastacembelus_armatus
ENSCING00000007564	-	98	49.048	ENSMZEG00005006948	yrdc	75	50.235	Maylandia_zebra
ENSCING00000007564	-	96	50.239	ENSMGAG00000002833	YRDC	98	50.239	Meleagris_gallopavo
ENSCING00000007564	-	87	32.000	ENSMGAG00000005489	-	50	32.000	Meleagris_gallopavo
ENSCING00000007564	-	51	48.624	ENSMAUG00000003715	-	99	48.624	Mesocricetus_auratus
ENSCING00000007564	-	98	47.418	ENSMICG00000031688	YRDC	73	47.418	Microcebus_murinus
ENSCING00000007564	-	66	48.966	ENSMOCG00000000164	-	55	48.966	Microtus_ochrogaster
ENSCING00000007564	-	98	50.000	ENSMMOG00000002119	yrdc	76	50.000	Mola_mola
ENSCING00000007564	-	98	48.131	ENSMODG00000017750	YRDC	73	48.131	Monodelphis_domestica
ENSCING00000007564	-	98	50.235	ENSMALG00000012471	yrdc	77	50.235	Monopterus_albus
ENSCING00000007564	-	90	47.716	MGP_CAROLIEiJ_G0026453	Yrdc	97	49.533	Mus_caroli
ENSCING00000007564	-	98	49.765	ENSMUSG00000028889	Yrdc	99	50.459	Mus_musculus
ENSCING00000007564	-	98	49.765	MGP_PahariEiJ_G0028784	Yrdc	99	50.459	Mus_pahari
ENSCING00000007564	-	98	49.765	MGP_SPRETEiJ_G0027432	Yrdc	73	49.765	Mus_spretus
ENSCING00000007564	-	97	49.528	ENSMPUG00000014542	YRDC	81	49.528	Mustela_putorius_furo
ENSCING00000007564	-	98	40.845	ENSMLUG00000028796	-	73	40.845	Myotis_lucifugus
ENSCING00000007564	-	98	48.826	ENSMLUG00000000955	-	73	48.826	Myotis_lucifugus
ENSCING00000007564	-	96	46.154	ENSMLUG00000024310	-	98	46.154	Myotis_lucifugus
ENSCING00000007564	-	98	47.664	ENSNGAG00000019099	Yrdc	73	47.664	Nannospalax_galili
ENSCING00000007564	-	98	50.235	ENSNBRG00000009475	yrdc	75	50.235	Neolamprologus_brichardi
ENSCING00000007564	-	98	48.357	ENSNLEG00000011665	YRDC	73	48.357	Nomascus_leucogenys
ENSCING00000007564	-	98	48.131	ENSMEUG00000005068	YRDC	95	48.131	Notamacropus_eugenii
ENSCING00000007564	-	98	47.418	ENSODEG00000007401	YRDC	99	49.541	Octodon_degus
ENSCING00000007564	-	98	49.524	ENSONIG00000016213	yrdc	84	50.704	Oreochromis_niloticus
ENSCING00000007564	-	54	43.590	ENSOANG00000002048	-	88	43.590	Ornithorhynchus_anatinus
ENSCING00000007564	-	98	46.729	ENSOCUG00000005384	YRDC	70	46.729	Oryctolagus_cuniculus
ENSCING00000007564	-	98	48.598	ENSORLG00000014393	yrdc	76	48.598	Oryzias_latipes
ENSCING00000007564	-	98	49.065	ENSORLG00020019663	yrdc	76	49.065	Oryzias_latipes_hni
ENSCING00000007564	-	98	48.131	ENSORLG00015004625	yrdc	76	48.131	Oryzias_latipes_hsok
ENSCING00000007564	-	98	48.131	ENSOMEG00000018550	yrdc	77	48.131	Oryzias_melastigma
ENSCING00000007564	-	98	46.948	ENSOGAG00000030474	YRDC	74	46.948	Otolemur_garnettii
ENSCING00000007564	-	98	47.418	ENSOARG00000019873	YRDC	73	47.418	Ovis_aries
ENSCING00000007564	-	67	52.414	ENSPPAG00000039722	-	92	52.414	Pan_paniscus
ENSCING00000007564	-	98	48.826	ENSPPRG00000007752	YRDC	73	48.826	Panthera_pardus
ENSCING00000007564	-	67	53.103	ENSPTIG00000019821	YRDC	59	53.103	Panthera_tigris_altaica
ENSCING00000007564	-	98	48.357	ENSPTRG00000000557	YRDC	73	48.357	Pan_troglodytes
ENSCING00000007564	-	98	48.826	ENSPANG00000006487	YRDC	55	48.826	Papio_anubis
ENSCING00000007564	-	98	51.402	ENSPKIG00000004574	yrdc	74	51.402	Paramormyrops_kingsleyae
ENSCING00000007564	-	98	47.664	ENSPSIG00000006483	YRDC	72	47.664	Pelodiscus_sinensis
ENSCING00000007564	-	98	51.643	ENSPMGG00000004184	yrdc	78	51.643	Periophthalmus_magnuspinnatus
ENSCING00000007564	-	83	47.514	ENSPEMG00000016985	Yrdc	76	47.283	Peromyscus_maniculatus_bairdii
ENSCING00000007564	-	85	45.161	ENSPMAG00000002905	yrdc	96	45.161	Petromyzon_marinus
ENSCING00000007564	-	98	48.131	ENSPCIG00000025731	YRDC	73	48.131	Phascolarctos_cinereus
ENSCING00000007564	-	98	49.765	ENSPFOG00000023097	yrdc	75	49.765	Poecilia_formosa
ENSCING00000007564	-	98	50.235	ENSPLAG00000020882	yrdc	75	50.235	Poecilia_latipinna
ENSCING00000007564	-	98	49.765	ENSPMEG00000013237	yrdc	75	49.765	Poecilia_mexicana
ENSCING00000007564	-	98	49.765	ENSPREG00000005285	yrdc	75	49.765	Poecilia_reticulata
ENSCING00000007564	-	98	48.357	ENSPPYG00000001523	-	84	48.357	Pongo_abelii
ENSCING00000007564	-	98	48.826	ENSPCAG00000016850	YRDC	73	48.826	Procavia_capensis
ENSCING00000007564	-	98	47.418	ENSPCOG00000013214	YRDC	73	47.418	Propithecus_coquereli
ENSCING00000007564	-	98	48.826	ENSPVAG00000010147	YRDC	73	48.826	Pteropus_vampyrus
ENSCING00000007564	-	98	49.524	ENSPNYG00000013956	yrdc	75	50.704	Pundamilia_nyererei
ENSCING00000007564	-	90	50.510	ENSPNAG00000015625	yrdc	76	50.510	Pygocentrus_nattereri
ENSCING00000007564	-	98	48.357	ENSRNOG00000025424	Yrdc	73	48.357	Rattus_norvegicus
ENSCING00000007564	-	98	48.357	ENSRBIG00000032289	YRDC	73	48.357	Rhinopithecus_bieti
ENSCING00000007564	-	97	48.585	ENSRROG00000039370	YRDC	69	48.585	Rhinopithecus_roxellana
ENSCING00000007564	-	98	49.296	ENSSBOG00000018937	YRDC	87	49.296	Saimiri_boliviensis_boliviensis
ENSCING00000007564	-	71	48.366	ENSSHAG00000013957	-	97	48.366	Sarcophilus_harrisii
ENSCING00000007564	-	97	50.943	ENSSFOG00015006128	yrdc	87	50.943	Scleropages_formosus
ENSCING00000007564	-	98	49.765	ENSSMAG00000005195	yrdc	76	49.765	Scophthalmus_maximus
ENSCING00000007564	-	98	48.571	ENSSDUG00000009775	yrdc	75	49.765	Seriola_dumerili
ENSCING00000007564	-	69	32.680	ENSSDUG00000006736	-	78	33.113	Seriola_dumerili
ENSCING00000007564	-	60	33.588	ENSSDUG00000006631	-	64	33.588	Seriola_dumerili
ENSCING00000007564	-	60	32.824	ENSSLDG00000008694	-	64	32.824	Seriola_lalandi_dorsalis
ENSCING00000007564	-	98	48.571	ENSSLDG00000003196	yrdc	75	49.765	Seriola_lalandi_dorsalis
ENSCING00000007564	-	99	49.074	ENSSPUG00000003946	YRDC	80	49.074	Sphenodon_punctatus
ENSCING00000007564	-	98	48.837	ENSSPAG00000012559	yrdc	75	48.837	Stegastes_partitus
ENSCING00000007564	-	98	47.887	ENSSSCG00000040425	YRDC	73	47.887	Sus_scrofa
ENSCING00000007564	-	64	52.899	ENSTGUG00000001507	YRDC	90	52.899	Taeniopygia_guttata
ENSCING00000007564	-	94	49.515	ENSTRUG00000005923	yrdc	71	49.515	Takifugu_rubripes
ENSCING00000007564	-	76	47.590	ENSTBEG00000008863	YRDC	100	47.590	Tupaia_belangeri
ENSCING00000007564	-	67	53.103	ENSTTRG00000013538	-	92	53.103	Tursiops_truncatus
ENSCING00000007564	-	93	51.471	ENSUAMG00000006150	YRDC	96	51.471	Ursus_americanus
ENSCING00000007564	-	98	38.498	ENSVPAG00000006642	YRDC	87	38.498	Vicugna_pacos
ENSCING00000007564	-	98	49.533	ENSXETG00000014420	yrdc	86	49.533	Xenopus_tropicalis
ENSCING00000007564	-	98	48.585	ENSXCOG00000000829	yrdc	84	48.585	Xiphophorus_couchianus
ENSCING00000007564	-	98	48.113	ENSXMAG00000014606	yrdc	71	48.113	Xiphophorus_maculatus